RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 ZNF853P0CG23 659 aa23.57■■□□□ 1.36
PDE6B-202ENST00000429163 BCL11AQ9H165 835 aa23.57■■□□□ 1.36
PDE6B-202ENST00000429163 ITPRIPQ8IWB1 547 aa23.57■■□□□ 1.36
PDE6B-202ENST00000429163 SENP3Q9H4L4 574 aaPredicted RBP23.57■■□□□ 1.36
PDE6B-202ENST00000429163 PTCH1Q13635 1447 aa23.57■■□□□ 1.36
PDE6B-202ENST00000429163 TOPAZ1Q8N9V7 1692 aa23.57■■□□□ 1.36
PDE6B-202ENST00000429163 ADAMTS13Q76LX8 1427 aa23.56■■□□□ 1.36
PDE6B-202ENST00000429163 TXNDC2Q86VQ3 553 aa23.56■■□□□ 1.36
PDE6B-202ENST00000429163 NME9Q86XW9 330 aa23.54■■□□□ 1.36
PDE6B-202ENST00000429163 TBC1D32Q96NH3 1257 aa23.54■■□□□ 1.36
PDE6B-202ENST00000429163 PLEKHG3A1L390 1219 aa23.53■■□□□ 1.36
PDE6B-202ENST00000429163 HAP1P54257 671 aaPredicted RBP23.53■■□□□ 1.36
PDE6B-202ENST00000429163 NFKBIBQ15653 356 aa23.53■■□□□ 1.36
PDE6B-202ENST00000429163 TMEM57Q8N5G2 664 aa23.53■■□□□ 1.36
PDE6B-202ENST00000429163 EMILIN1Q9Y6C2 1016 aa23.53■■□□□ 1.36
PDE6B-202ENST00000429163 KIF24Q5T7B8 1368 aa23.52■■□□□ 1.36
PDE6B-202ENST00000429163 VAMP4O75379 141 aa23.52■■□□□ 1.36
PDE6B-202ENST00000429163 CFAP44Q96MT7 982 aa23.52■■□□□ 1.36
PDE6B-202ENST00000429163 PHACTR3Q96KR7 559 aa23.51■■□□□ 1.35
PDE6B-202ENST00000429163 MRPL50Q8N5N7 158 aaKnown RBP23.5■■□□□ 1.35
PDE6B-202ENST00000429163 ROBO2Q9HCK4 1378 aa23.5■■□□□ 1.35
PDE6B-202ENST00000429163 OVOS2A0A0J9YW53 1432 aa23.49■■□□□ 1.35
PDE6B-202ENST00000429163 OVOS2Q6IE36 1432 aa23.49■■□□□ 1.35
PDE6B-202ENST00000429163 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
PDE6B-202ENST00000429163 SEC24BO95487 1268 aa23.49■■□□□ 1.35
PDE6B-202ENST00000429163 PRR36Q9H6K5 1346 aa23.48■■□□□ 1.35
PDE6B-202ENST00000429163 DLG5Q8TDM6 1919 aa23.48■■□□□ 1.35
PDE6B-202ENST00000429163 HMOX1P09601 288 aa23.47■■□□□ 1.35
PDE6B-202ENST00000429163 SLIT1O75093 1534 aa23.47■■□□□ 1.35
PDE6B-202ENST00000429163 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
PDE6B-202ENST00000429163 USP31Q70CQ4 1352 aa23.47■■□□□ 1.35
PDE6B-202ENST00000429163 SLC4A3P48751 1232 aa23.47■■□□□ 1.35
PDE6B-202ENST00000429163 GCC1Q96CN9 775 aa23.47■■□□□ 1.35
PDE6B-202ENST00000429163 NUCB1Q02818 461 aa23.46■■□□□ 1.35
PDE6B-202ENST00000429163 ABCC4O15439 1325 aa23.46■■□□□ 1.35
PDE6B-202ENST00000429163 TTC21BQ7Z4L5 1316 aa23.46■■□□□ 1.35
PDE6B-202ENST00000429163 DIP2AQ14689 1571 aa23.46■■□□□ 1.35
PDE6B-202ENST00000429163 ARHGAP23Q9P227 1491 aa23.45■■□□□ 1.35
PDE6B-202ENST00000429163 USP6P35125 1406 aa23.45■■□□□ 1.34
PDE6B-202ENST00000429163 API5Q9BZZ5 524 aaKnown RBP23.45■■□□□ 1.34
PDE6B-202ENST00000429163 MBIPQ9NS73 344 aa23.44■■□□□ 1.34
PDE6B-202ENST00000429163 ZBTB7BO15156 539 aaPredicted RBP23.44■■□□□ 1.34
PDE6B-202ENST00000429163 TTC21AQ8NDW8 1320 aa23.44■■□□□ 1.34
PDE6B-202ENST00000429163 FBLN1P23142 703 aa23.43■■□□□ 1.34
PDE6B-202ENST00000429163 SSH2Q76I76 1423 aa23.43■■□□□ 1.34
PDE6B-202ENST00000429163 TWISTNBQ3B726 338 aaPredicted RBP23.42■■□□□ 1.34
PDE6B-202ENST00000429163 RGPD1P0DJD0 1748 aa23.42■■□□□ 1.34
PDE6B-202ENST00000429163 EID1Q9Y6B2 187 aa23.41■■□□□ 1.34
PDE6B-202ENST00000429163 EIF5BO60841 1220 aaKnown RBP23.41■■□□□ 1.34
PDE6B-202ENST00000429163 ZRANB1Q9UGI0 708 aa23.41■■□□□ 1.34
PDE6B-202ENST00000429163 TBX22Q9Y458 520 aa23.41■■□□□ 1.34
PDE6B-202ENST00000429163 KIAA0232Q92628 1395 aa23.4■■□□□ 1.34
PDE6B-202ENST00000429163 ACEP12821 1306 aa23.4■■□□□ 1.34
PDE6B-202ENST00000429163 GSE1Q14687 1217 aa23.39■■□□□ 1.34
PDE6B-202ENST00000429163 RIMS1Q86UR5 1692 aaKnown RBP23.39■■□□□ 1.34
PDE6B-202ENST00000429163 RRS1Q15050 365 aaKnown RBP23.39■■□□□ 1.33
PDE6B-202ENST00000429163 CHD1LQ86WJ1 897 aa23.38■■□□□ 1.33
PDE6B-202ENST00000429163 EIF4A2Q14240 407 aaKnown RBP23.38■■□□□ 1.33
PDE6B-202ENST00000429163 ARHGEF10O15013 1369 aa23.37■■□□□ 1.33
PDE6B-202ENST00000429163 LTKP29376 864 aa23.36■■□□□ 1.33
PDE6B-202ENST00000429163 BMP2KLQ5H9B9 411 aa23.36■■□□□ 1.33
PDE6B-202ENST00000429163 TSPYL6Q8N831 410 aa23.36■■□□□ 1.33
PDE6B-202ENST00000429163 NCKAP5LQ9HCH0 1330 aa23.36■■□□□ 1.33
PDE6B-202ENST00000429163 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
PDE6B-202ENST00000429163 PTPRUQ92729 1446 aa23.35■■□□□ 1.33
PDE6B-202ENST00000429163 THUMPD2Q9BTF0 503 aaKnown RBP23.35■■□□□ 1.33
PDE6B-202ENST00000429163 CHL1O00533 1208 aa23.34■■□□□ 1.33
PDE6B-202ENST00000429163 ANTXR1Q9H6X2 564 aa23.34■■□□□ 1.33
PDE6B-202ENST00000429163 TBC1D2Q9BYX2 928 aa23.33■■□□□ 1.32
PDE6B-202ENST00000429163 ANKARQ7Z5J8 1434 aa23.33■■□□□ 1.32
PDE6B-202ENST00000429163 C8orf58Q8NAV2 365 aa23.32■■□□□ 1.32
PDE6B-202ENST00000429163 PEAK1Q9H792 1746 aa23.32■■□□□ 1.32
PDE6B-202ENST00000429163 RBM25P49756 843 aaKnown RBP23.32■■□□□ 1.32
PDE6B-202ENST00000429163 INTS3Q68E01 1043 aaKnown RBP23.32■■□□□ 1.32
PDE6B-202ENST00000429163 SULT6B1Q6IMI4 303 aa23.31■■□□□ 1.32
PDE6B-202ENST00000429163 PTPRCP08575 1304 aa23.31■■□□□ 1.32
PDE6B-202ENST00000429163 SBNO1A3KN83 1393 aa23.31■■□□□ 1.32
PDE6B-202ENST00000429163 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
PDE6B-202ENST00000429163 KDRP35968 1356 aa23.29■■□□□ 1.32
PDE6B-202ENST00000429163 USP54Q70EL1 1684 aa23.29■■□□□ 1.32
PDE6B-202ENST00000429163 FLT4P35916 1363 aa23.29■■□□□ 1.32
PDE6B-202ENST00000429163 THEMISQ8N1K5 641 aaPredicted RBP23.29■■□□□ 1.32
PDE6B-202ENST00000429163 XRN1Q8IZH2 1706 aaKnown RBP23.28■■□□□ 1.32
PDE6B-202ENST00000429163 FRAT2O75474 233 aaPredicted RBP23.28■■□□□ 1.32
PDE6B-202ENST00000429163 AMOTL2Q9Y2J4 779 aa23.28■■□□□ 1.32
PDE6B-202ENST00000429163 LNPKQ9C0E8 428 aa23.27■■□□□ 1.32
PDE6B-202ENST00000429163 HTATSF1O43719 755 aaKnown RBP23.26■■□□□ 1.31
PDE6B-202ENST00000429163 SNX21Q969T3 373 aa23.26■■□□□ 1.31
PDE6B-202ENST00000429163 FAM83GA6ND36 823 aa23.26■■□□□ 1.31
PDE6B-202ENST00000429163 MFAP1P55081 439 aaKnown RBP23.26■■□□□ 1.31
PDE6B-202ENST00000429163 CRB1P82279 1406 aa23.26■■□□□ 1.31
PDE6B-202ENST00000429163 ANKRD45Q5TZF3 282 aa23.24■■□□□ 1.31
PDE6B-202ENST00000429163 RPAP2Q8IXW5 612 aaPredicted RBP23.24■■□□□ 1.31
PDE6B-202ENST00000429163 FER1L4A9Z1Z3 1794 aa23.24■■□□□ 1.31
PDE6B-202ENST00000429163 SOS1Q07889 1333 aaPredicted RBP23.24■■□□□ 1.31
PDE6B-202ENST00000429163 AEBP1Q8IUX7 1158 aa23.24■■□□□ 1.31
PDE6B-202ENST00000429163 SIRT2Q8IXJ6 389 aa23.23■■□□□ 1.31
PDE6B-202ENST00000429163 DCTPP1Q9H773 170 aa23.23■■□□□ 1.31
PDE6B-202ENST00000429163 HSP90AB2PQ58FF8 381 aa23.23■■□□□ 1.31
PDE6B-202ENST00000429163 RGS12O14924 1447 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms