RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 DLC1Q96QB1 1528 aa11.08□□□□□ -0.64
CDH13-202ENST00000428848 IPO8O15397 1037 aaKnown RBP11.07□□□□□ -0.64
CDH13-202ENST00000428848 PDE4CQ08493 712 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 PRAM1Q96QH2 718 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 RIMS2Q9UQ26 1411 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 A2ML1A8K2U0 1454 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 GOLGA6L3A6NEY3 463 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 ZNF428Q96B54 188 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 PIK3R4Q99570 1358 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 LMTK3Q96Q04 1460 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 LRRC7Q96NW7 1537 aa11.07□□□□□ -0.64
CDH13-202ENST00000428848 TRAK2O60296 914 aa11.06□□□□□ -0.64
CDH13-202ENST00000428848 DIAPH1O60610 1272 aaKnown RBP11.06□□□□□ -0.64
CDH13-202ENST00000428848 FAM135BQ49AJ0 1406 aa11.06□□□□□ -0.64
CDH13-202ENST00000428848 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
CDH13-202ENST00000428848 FCHSD2O94868 740 aa11.06□□□□□ -0.64
CDH13-202ENST00000428848 FGD1P98174 961 aa11.06□□□□□ -0.64
CDH13-202ENST00000428848 HSCBQ8IWL3 235 aa11.06□□□□□ -0.64
CDH13-202ENST00000428848 SETD1AO15047 1707 aaKnown RBP11.05□□□□□ -0.64
CDH13-202ENST00000428848 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
CDH13-202ENST00000428848 PTCH1Q13635 1447 aa11.05□□□□□ -0.64
CDH13-202ENST00000428848 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
CDH13-202ENST00000428848 SAFB2Q14151 953 aaKnown RBP eCLIP11.04□□□□□ -0.64
CDH13-202ENST00000428848 CHD1LQ86WJ1 897 aa11.04□□□□□ -0.64
CDH13-202ENST00000428848 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
CDH13-202ENST00000428848 DDX11L8A8MPP1 907 aa11.04□□□□□ -0.64
CDH13-202ENST00000428848 ZBTB7BO15156 539 aaPredicted RBP11.04□□□□□ -0.64
CDH13-202ENST00000428848 PDIA4P13667 645 aaKnown RBP11.04□□□□□ -0.64
CDH13-202ENST00000428848 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
CDH13-202ENST00000428848 KIF2CQ99661 725 aa11.04□□□□□ -0.64
CDH13-202ENST00000428848 CIZ1Q9ULV3 898 aaPredicted RBP11.04□□□□□ -0.64
CDH13-202ENST00000428848 ARHGAP45Q92619 1136 aa11.03□□□□□ -0.64
CDH13-202ENST00000428848 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
CDH13-202ENST00000428848 FER1L4A9Z1Z3 1794 aa11.03□□□□□ -0.64
CDH13-202ENST00000428848 CDK19Q9BWU1 502 aa11.03□□□□□ -0.64
CDH13-202ENST00000428848 PANK2Q9BZ23 570 aa11.03□□□□□ -0.64
CDH13-202ENST00000428848 LNPKQ9C0E8 428 aa11.03□□□□□ -0.64
CDH13-202ENST00000428848 VAMP4O75379 141 aa11.02□□□□□ -0.65
CDH13-202ENST00000428848 MRE11P49959 708 aa11.02□□□□□ -0.65
CDH13-202ENST00000428848 MRPL50Q8N5N7 158 aaKnown RBP11.02□□□□□ -0.65
CDH13-202ENST00000428848 GCC1Q96CN9 775 aa11.02□□□□□ -0.65
CDH13-202ENST00000428848 TNRQ92752 1358 aa11.02□□□□□ -0.65
CDH13-202ENST00000428848 TPM2P07951 284 aa11.01□□□□□ -0.65
CDH13-202ENST00000428848 RAB3GAP1Q15042 981 aa11.01□□□□□ -0.65
CDH13-202ENST00000428848 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
CDH13-202ENST00000428848 ATP7BP35670 1465 aa11.01□□□□□ -0.65
CDH13-202ENST00000428848 ZNF853P0CG23 659 aa11.01□□□□□ -0.65
CDH13-202ENST00000428848 GZF1Q9H116 711 aaPredicted RBP11.01□□□□□ -0.65
CDH13-202ENST00000428848 ABCC4O15439 1325 aa11.01□□□□□ -0.65
CDH13-202ENST00000428848 PRKAR2BP31323 418 aa11□□□□□ -0.65
CDH13-202ENST00000428848 TNPO1Q92973 898 aaKnown RBP11□□□□□ -0.65
CDH13-202ENST00000428848 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
CDH13-202ENST00000428848 POLKQ9UBT6 870 aa11□□□□□ -0.65
CDH13-202ENST00000428848 KNDC1Q76NI1 1749 aa11□□□□□ -0.65
CDH13-202ENST00000428848 NRXN3Q9Y4C0 1643 aa11□□□□□ -0.65
CDH13-202ENST00000428848 NFE2L2Q16236 605 aa11□□□□□ -0.65
CDH13-202ENST00000428848 SIRT2Q8IXJ6 389 aa11□□□□□ -0.65
CDH13-202ENST00000428848 PDCL3Q9H2J4 239 aa10.99□□□□□ -0.65
CDH13-202ENST00000428848 GRPEL1Q9HAV7 217 aa10.99□□□□□ -0.65
CDH13-202ENST00000428848 CABP1Q9NZU7 370 aa10.99□□□□□ -0.65
CDH13-202ENST00000428848 PHACTR3Q96KR7 559 aa10.99□□□□□ -0.65
CDH13-202ENST00000428848 IFT57Q9NWB7 429 aa10.99□□□□□ -0.65
CDH13-202ENST00000428848 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
CDH13-202ENST00000428848 ANKRD45Q5TZF3 282 aa10.98□□□□□ -0.65
CDH13-202ENST00000428848 CLEC17AQ6ZS10 378 aa10.98□□□□□ -0.65
CDH13-202ENST00000428848 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
CDH13-202ENST00000428848 UBR1Q8IWV7 1749 aa10.98□□□□□ -0.65
CDH13-202ENST00000428848 CALD1Q05682 793 aaKnown RBP10.97□□□□□ -0.65
CDH13-202ENST00000428848 TBC1D9Q6ZT07 1266 aa10.97□□□□□ -0.65
CDH13-202ENST00000428848 TECPR2O15040 1411 aa10.97□□□□□ -0.65
CDH13-202ENST00000428848 KIF24Q5T7B8 1368 aa10.97□□□□□ -0.65
CDH13-202ENST00000428848 TMEM2Q9UHN6 1383 aa10.97□□□□□ -0.65
CDH13-202ENST00000428848 ESPNB1AK53 854 aa10.97□□□□□ -0.65
CDH13-202ENST00000428848 WASLO00401 505 aaPredicted RBP10.97□□□□□ -0.65
CDH13-202ENST00000428848 GNAI1P63096 354 aa10.97□□□□□ -0.65
CDH13-202ENST00000428848 CDK12Q9NYV4 1490 aaPredicted RBP10.97□□□□□ -0.65
CDH13-202ENST00000428848 K7ELQ4 463 aaPredicted RBP10.96□□□□□ -0.65
CDH13-202ENST00000428848 HSP90AB1P08238 724 aaKnown RBP10.96□□□□□ -0.65
CDH13-202ENST00000428848 PTMSP20962 102 aa10.96□□□□□ -0.65
CDH13-202ENST00000428848 IL13P35225 146 aa10.96□□□□□ -0.65
CDH13-202ENST00000428848 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.65
CDH13-202ENST00000428848 FBXO41Q8TF61 875 aa10.96□□□□□ -0.65
CDH13-202ENST00000428848 GBP4Q96PP9 640 aa10.96□□□□□ -0.65
CDH13-202ENST00000428848 AATKQ6ZMQ8 1374 aa10.96□□□□□ -0.66
CDH13-202ENST00000428848 CPSF1Q10570 1443 aaKnown RBP10.96□□□□□ -0.66
CDH13-202ENST00000428848 GAS2L3Q86XJ1 694 aa10.96□□□□□ -0.66
CDH13-202ENST00000428848 ARXQ96QS3 562 aa10.96□□□□□ -0.66
CDH13-202ENST00000428848 C1orf115Q9H7X2 142 aa10.96□□□□□ -0.66
CDH13-202ENST00000428848 MBIPQ9NS73 344 aa10.96□□□□□ -0.66
CDH13-202ENST00000428848 EID1Q9Y6B2 187 aa10.96□□□□□ -0.66
CDH13-202ENST00000428848 CPS1P31327 1500 aa10.95□□□□□ -0.66
CDH13-202ENST00000428848 EDC4Q6P2E9 1401 aaKnown RBP10.95□□□□□ -0.66
CDH13-202ENST00000428848 FBLN1P23142 703 aa10.95□□□□□ -0.66
CDH13-202ENST00000428848 THUMPD2Q9BTF0 503 aaKnown RBP10.95□□□□□ -0.66
CDH13-202ENST00000428848 RBM10P98175 930 aaKnown RBP10.94□□□□□ -0.66
CDH13-202ENST00000428848 CDC45O75419 566 aa10.94□□□□□ -0.66
CDH13-202ENST00000428848 HMOX1P09601 288 aa10.94□□□□□ -0.66
CDH13-202ENST00000428848 WAPLQ7Z5K2 1190 aa10.94□□□□□ -0.66
CDH13-202ENST00000428848 CFAP44Q96MT7 982 aa10.94□□□□□ -0.66
CDH13-202ENST00000428848 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms