RNA–Protein interactions for RNA: ENST00000427482.6

SH3GL3-202, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-202ENST00000427482 TMEM94Q12767 1356 aa34.66■■■■□ 3.14
SH3GL3-202ENST00000427482 PHACTR3Q96KR7 559 aa34.65■■■■□ 3.14
SH3GL3-202ENST00000427482 DCCP43146 1447 aa34.65■■■■□ 3.14
SH3GL3-202ENST00000427482 IL16Q14005 1332 aa34.65■■■■□ 3.14
SH3GL3-202ENST00000427482 PSME1Q06323 249 aa34.65■■■■□ 3.14
SH3GL3-202ENST00000427482 ORAI2Q96SN7 254 aa34.65■■■■□ 3.14
SH3GL3-202ENST00000427482 NFE2L2Q16236 605 aa34.64■■■■□ 3.14
SH3GL3-202ENST00000427482 TRPM3Q9HCF6 1732 aaPredicted RBP34.63■■■■□ 3.13
SH3GL3-202ENST00000427482 KIF24Q5T7B8 1368 aa34.63■■■■□ 3.13
SH3GL3-202ENST00000427482 NUTM2GQ5VZR2 741 aa34.63■■■■□ 3.13
SH3GL3-202ENST00000427482 EXOC6Q8TAG9 804 aa34.63■■■■□ 3.13
SH3GL3-202ENST00000427482 LTN1O94822 1766 aa34.63■■■■□ 3.13
SH3GL3-202ENST00000427482 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.62■■■■□ 3.13
SH3GL3-202ENST00000427482 XIRP1Q702N8 1843 aaKnown RBP34.6■■■■□ 3.13
SH3GL3-202ENST00000427482 MST1RQ04912 1400 aa34.59■■■■□ 3.13
SH3GL3-202ENST00000427482 NFAT5O94916 1531 aa34.58■■■■□ 3.13
SH3GL3-202ENST00000427482 AMPHP49418 695 aa34.58■■■■□ 3.13
SH3GL3-202ENST00000427482 ARHGEF10O15013 1369 aa34.58■■■■□ 3.13
SH3GL3-202ENST00000427482 FANCIQ9NVI1 1328 aa34.56■■■■□ 3.12
SH3GL3-202ENST00000427482 SULT6B1Q6IMI4 303 aa34.55■■■■□ 3.12
SH3GL3-202ENST00000427482 AEBP1Q8IUX7 1158 aa34.55■■■■□ 3.12
SH3GL3-202ENST00000427482 CCDC136Q96JN2 1154 aa34.55■■■■□ 3.12
SH3GL3-202ENST00000427482 FOXO3O43524 673 aa34.55■■■■□ 3.12
SH3GL3-202ENST00000427482 BCAR3O75815 825 aa34.55■■■■□ 3.12
SH3GL3-202ENST00000427482 ATF3P18847 181 aa34.55■■■■□ 3.12
SH3GL3-202ENST00000427482 C20orf194Q5TEA3 1177 aa34.53■■■■□ 3.12
SH3GL3-202ENST00000427482 RTL1A6NKG5 1358 aa34.53■■■■□ 3.12
SH3GL3-202ENST00000427482 PHRF1Q9P1Y6 1649 aaKnown RBP34.53■■■■□ 3.12
SH3GL3-202ENST00000427482 CRBNQ96SW2 442 aa34.53■■■■□ 3.12
SH3GL3-202ENST00000427482 HOXC9P31274 260 aa34.51■■■■□ 3.12
SH3GL3-202ENST00000427482 TSR2Q969E8 191 aaKnown RBP34.51■■■■□ 3.12
SH3GL3-202ENST00000427482 SLIT3O75094 1523 aa34.5■■■■□ 3.11
SH3GL3-202ENST00000427482 CT47B1P0C2W7 299 aaPredicted RBP34.49■■■■□ 3.11
SH3GL3-202ENST00000427482 ALS2Q96Q42 1657 aa34.49■■■■□ 3.11
SH3GL3-202ENST00000427482 RARSP54136 660 aaKnown RBP34.48■■■■□ 3.11
SH3GL3-202ENST00000427482 LMOD3Q0VAK6 560 aa34.48■■■■□ 3.11
SH3GL3-202ENST00000427482 KDRP35968 1356 aa34.48■■■■□ 3.11
SH3GL3-202ENST00000427482 IGSF1Q8N6C5 1336 aa34.47■■■■□ 3.11
SH3GL3-202ENST00000427482 XPCQ01831 940 aaPredicted RBP34.47■■■■□ 3.11
SH3GL3-202ENST00000427482 CALD1Q05682 793 aaKnown RBP34.46■■■■□ 3.11
SH3GL3-202ENST00000427482 KRT28Q7Z3Y7 464 aa34.46■■■■□ 3.11
SH3GL3-202ENST00000427482 KCNH5Q8NCM2 988 aa34.46■■■■□ 3.11
SH3GL3-202ENST00000427482 MSH6P52701 1360 aa34.46■■■■□ 3.11
SH3GL3-202ENST00000427482 CADPS2Q86UW7 1296 aa34.46■■■■□ 3.11
SH3GL3-202ENST00000427482 EXOSC9Q06265 439 aaKnown RBP34.44■■■■□ 3.1
SH3GL3-202ENST00000427482 EYA1Q99502 592 aa34.43■■■■□ 3.1
SH3GL3-202ENST00000427482 THUMPD2Q9BTF0 503 aaKnown RBP34.4■■■■□ 3.1
SH3GL3-202ENST00000427482 USP19O94966 1318 aa34.4■■■■□ 3.1
SH3GL3-202ENST00000427482 IP6K1Q92551 441 aa34.39■■■■□ 3.1
SH3GL3-202ENST00000427482 IFT57Q9NWB7 429 aa34.39■■■■□ 3.1
SH3GL3-202ENST00000427482 PDE3AQ14432 1141 aa34.37■■■■□ 3.09
SH3GL3-202ENST00000427482 GNAI1P63096 354 aa34.37■■■■□ 3.09
SH3GL3-202ENST00000427482 ZNF853P0CG23 659 aa34.36■■■■□ 3.09
SH3GL3-202ENST00000427482 TSHZ2Q9NRE2 1034 aa34.35■■■■□ 3.09
SH3GL3-202ENST00000427482 ZNF335Q9H4Z2 1342 aaPredicted RBP34.35■■■■□ 3.09
SH3GL3-202ENST00000427482 FAM83GA6ND36 823 aa34.34■■■■□ 3.09
SH3GL3-202ENST00000427482 GCP02774 474 aa34.34■■■■□ 3.09
SH3GL3-202ENST00000427482 CANXP27824 592 aaKnown RBP34.34■■■■□ 3.09
SH3GL3-202ENST00000427482 LMOD2Q6P5Q4 547 aa34.32■■■■□ 3.09
SH3GL3-202ENST00000427482 LAS1LQ9Y4W2 734 aaKnown RBP34.32■■■■□ 3.09
SH3GL3-202ENST00000427482 BCL2L13Q9BXK5 485 aa34.32■■■■□ 3.08
SH3GL3-202ENST00000427482 MED1Q15648 1581 aaPredicted RBP34.31■■■■□ 3.08
SH3GL3-202ENST00000427482 NPHP3Q7Z494 1330 aa34.31■■■■□ 3.08
SH3GL3-202ENST00000427482 RGPD2P0DJD1 1756 aa34.31■■■■□ 3.08
SH3GL3-202ENST00000427482 ARHGEF25Q86VW2 580 aa34.3■■■■□ 3.08
SH3GL3-202ENST00000427482 FRAT1Q92837 279 aaPredicted RBP34.3■■■■□ 3.08
SH3GL3-202ENST00000427482 LTV1Q96GA3 475 aaPredicted RBP34.3■■■■□ 3.08
SH3GL3-202ENST00000427482 CFAP44Q96MT7 982 aa34.3■■■■□ 3.08
SH3GL3-202ENST00000427482 PXDNQ92626 1479 aa34.3■■■■□ 3.08
SH3GL3-202ENST00000427482 DCTN1Q14203 1278 aa34.29■■■■□ 3.08
SH3GL3-202ENST00000427482 MTHFSDQ2M296 383 aaKnown RBP34.27■■■■□ 3.08
SH3GL3-202ENST00000427482 MBIPQ9NS73 344 aa34.27■■■■□ 3.08
SH3GL3-202ENST00000427482 DDX17Q92841 729 aaKnown RBP34.26■■■■□ 3.08
SH3GL3-202ENST00000427482 GAS2L2Q8NHY3 880 aa34.25■■■■□ 3.07
SH3GL3-202ENST00000427482 TNS3Q68CZ2 1445 aa34.25■■■■□ 3.07
SH3GL3-202ENST00000427482 SSH1Q8WYL5 1049 aa34.25■■■■□ 3.07
SH3GL3-202ENST00000427482 SMC4Q9NTJ3 1288 aa34.25■■■■□ 3.07
SH3GL3-202ENST00000427482 CRYBG1Q9Y4K1 1723 aa34.24■■■■□ 3.07
SH3GL3-202ENST00000427482 PANK1Q8TE04 598 aa34.24■■■■□ 3.07
SH3GL3-202ENST00000427482 ZNF428Q96B54 188 aa34.24■■■■□ 3.07
SH3GL3-202ENST00000427482 ZBTB7CA1YPR0 619 aa34.23■■■■□ 3.07
SH3GL3-202ENST00000427482 RGPD5Q99666 1765 aa34.23■■■■□ 3.07
SH3GL3-202ENST00000427482 LRRC37A3O60309 1634 aa34.22■■■■□ 3.07
SH3GL3-202ENST00000427482 ALDH1L2Q3SY69 923 aa34.22■■■■□ 3.07
SH3GL3-202ENST00000427482 CAMTA1Q9Y6Y1 1673 aa34.22■■■■□ 3.07
SH3GL3-202ENST00000427482 MCM10Q7L590 875 aa34.21■■■■□ 3.07
SH3GL3-202ENST00000427482 CRB1P82279 1406 aa34.2■■■■□ 3.07
SH3GL3-202ENST00000427482 ZKSCAN2Q63HK3 967 aa34.2■■■■□ 3.07
SH3GL3-202ENST00000427482 PLEKHG5O94827 1062 aa34.19■■■■□ 3.06
SH3GL3-202ENST00000427482 BRINP3Q76B58 766 aa34.19■■■■□ 3.06
SH3GL3-202ENST00000427482 NCAPD2Q15021 1401 aa34.18■■■■□ 3.06
SH3GL3-202ENST00000427482 NBPF6Q5VWK0 638 aa34.18■■■■□ 3.06
SH3GL3-202ENST00000427482 NBPF4Q96M43 638 aa34.18■■■■□ 3.06
SH3GL3-202ENST00000427482 TNNQ9UQP3 1299 aa34.18■■■■□ 3.06
SH3GL3-202ENST00000427482 COG6Q9Y2V7 657 aa34.18■■■■□ 3.06
SH3GL3-202ENST00000427482 VAMP4O75379 141 aa34.17■■■■□ 3.06
SH3GL3-202ENST00000427482 USHBP1Q8N6Y0 703 aa34.17■■■■□ 3.06
SH3GL3-202ENST00000427482 HTATSF1O43719 755 aaKnown RBP34.16■■■■□ 3.06
SH3GL3-202ENST00000427482 RLBP1P12271 317 aa34.16■■■■□ 3.06
SH3GL3-202ENST00000427482 RTF1Q92541 710 aaKnown RBP34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms