RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 IQGAP3Q86VI3 1631 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 DUOX2Q9NRD8 1548 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 DDIT3P35638 169 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 DCTN1Q14203 1278 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 JARID2Q92833 1246 aaPredicted RBP9.19□□□□□ -0.94
LINC01108-201ENST00000427276 MYOM1P52179 1685 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 PTPRTO14522 1441 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 MAST1Q9Y2H9 1570 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.19□□□□□ -0.94
LINC01108-201ENST00000427276 NEK4P51957 841 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 FGD1P98174 961 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 RABEP1Q15276 862 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 PPP1R9BQ96SB3 815 aa9.19□□□□□ -0.94
LINC01108-201ENST00000427276 ATP10AO60312 1499 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 CT47B1P0C2W7 299 aaPredicted RBP9.18□□□□□ -0.94
LINC01108-201ENST00000427276 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
LINC01108-201ENST00000427276 SLC4A10Q6U841 1118 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 TSPOAP1O95153 1857 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 IQGAP1P46940 1657 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
LINC01108-201ENST00000427276 SOX12O15370 315 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 TSHZ3Q63HK5 1081 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 LMBRD1Q9NUN5 540 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 NSFL1CQ9UNZ2 370 aaKnown RBP9.18□□□□□ -0.94
LINC01108-201ENST00000427276 DTNBO60941 627 aa9.18□□□□□ -0.94
LINC01108-201ENST00000427276 GSPT1P15170 499 aaKnown RBP9.18□□□□□ -0.94
LINC01108-201ENST00000427276 TWISTNBQ3B726 338 aaPredicted RBP9.17□□□□□ -0.94
LINC01108-201ENST00000427276 INTS3Q68E01 1043 aaKnown RBP9.17□□□□□ -0.94
LINC01108-201ENST00000427276 FAM83GA6ND36 823 aa9.17□□□□□ -0.94
LINC01108-201ENST00000427276 SIRT2Q8IXJ6 389 aa9.17□□□□□ -0.94
LINC01108-201ENST00000427276 GPT2Q8TD30 523 aa9.17□□□□□ -0.94
LINC01108-201ENST00000427276 CHMP4BQ9H444 224 aaKnown RBP9.17□□□□□ -0.94
LINC01108-201ENST00000427276 TMEM63CQ9P1W3 806 aa9.17□□□□□ -0.94
LINC01108-201ENST00000427276 C17orf53Q8N3J3 647 aaPredicted RBP9.16□□□□□ -0.94
LINC01108-201ENST00000427276 RILPL2Q969X0 211 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 PHACTR3Q96KR7 559 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 ZMYM3Q14202 1370 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 TRIM6-TRIM34B2RNG4 842 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 UHRF1BP1LA0JNW5 1464 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 CLTCL1P53675 1640 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 PLEKHM2Q8IWE5 1019 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 PLEKHF1Q96S99 279 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 TERF2IPQ9NYB0 399 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 CCDC39Q9UFE4 941 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 NOL7Q9UMY1 257 aaKnown RBP9.16□□□□□ -0.94
LINC01108-201ENST00000427276 ZKSCAN5Q9Y2L8 839 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 PPIP5K1Q6PFW1 1433 aa9.16□□□□□ -0.94
LINC01108-201ENST00000427276 HDGFL2Q7Z4V5 671 aaPredicted RBP9.15□□□□□ -0.94
LINC01108-201ENST00000427276 ASXL2Q76L83 1435 aa9.15□□□□□ -0.94
LINC01108-201ENST00000427276 ZNF518AQ6AHZ1 1483 aa9.15□□□□□ -0.94
LINC01108-201ENST00000427276 FYB1O15117 783 aa9.15□□□□□ -0.95
LINC01108-201ENST00000427276 VAMP4O75379 141 aa9.15□□□□□ -0.95
LINC01108-201ENST00000427276 SDSP20132 328 aa9.15□□□□□ -0.95
LINC01108-201ENST00000427276 CBX1P83916 185 aa9.15□□□□□ -0.95
LINC01108-201ENST00000427276 KIAA2012Q0VF49 1180 aa9.15□□□□□ -0.95
LINC01108-201ENST00000427276 KRT24Q2M2I5 525 aa9.15□□□□□ -0.95
LINC01108-201ENST00000427276 LARP6Q9BRS8 491 aaKnown RBP9.15□□□□□ -0.95
LINC01108-201ENST00000427276 STAG3Q9UJ98 1225 aa9.15□□□□□ -0.95
LINC01108-201ENST00000427276 ZNF445P59923 1031 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 C8orf58Q8NAV2 365 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 UPF3BQ9BZI7 483 aaKnown RBP9.14□□□□□ -0.95
LINC01108-201ENST00000427276 ANO2Q9NQ90 1003 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 ABCC11Q96J66 1382 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 GLI2P10070 1586 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 CD109Q6YHK3 1445 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 KDM4FA0A1W2PPD8 638 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 ALDH1L2Q3SY69 923 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 TTC22Q5TAA0 569 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 MRPL50Q8N5N7 158 aaKnown RBP9.14□□□□□ -0.95
LINC01108-201ENST00000427276 USP26Q9BXU7 913 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 C14orf93Q9H972 538 aaKnown RBP9.14□□□□□ -0.95
LINC01108-201ENST00000427276 MBIPQ9NS73 344 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 CABP1Q9NZU7 370 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 CEP152O94986 1710 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 NCOA3Q9Y6Q9 1424 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 LRSAM1Q6UWE0 723 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 PAXIP1Q6ZW49 1069 aaPredicted RBP9.14□□□□□ -0.95
LINC01108-201ENST00000427276 USP25Q9UHP3 1055 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 CHMP3Q9Y3E7 222 aa9.14□□□□□ -0.95
LINC01108-201ENST00000427276 REC8O95072 547 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 CDK11BP21127 795 aaKnown RBP9.13□□□□□ -0.95
LINC01108-201ENST00000427276 PRAM1Q96QH2 718 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 TSPY26PQ9H489 355 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 TTC12Q9H892 705 aaPredicted RBP9.13□□□□□ -0.95
LINC01108-201ENST00000427276 PLXNC1O60486 1568 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 IGSF3O75054 1194 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 GNAI1P63096 354 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 NECTIN2Q92692 538 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 MAP7D2Q96T17 732 aa9.13□□□□□ -0.95
LINC01108-201ENST00000427276 API5Q9BZZ5 524 aaKnown RBP9.13□□□□□ -0.95
LINC01108-201ENST00000427276 SASS6Q6UVJ0 657 aa9.12□□□□□ -0.95
LINC01108-201ENST00000427276 EMILIN1Q9Y6C2 1016 aa9.12□□□□□ -0.95
LINC01108-201ENST00000427276 SPHKAPQ2M3C7 1700 aa9.12□□□□□ -0.95
LINC01108-201ENST00000427276 CWC22Q9HCG8 908 aaKnown RBP9.12□□□□□ -0.95
LINC01108-201ENST00000427276 EXOC6BQ9Y2D4 811 aa9.12□□□□□ -0.95
LINC01108-201ENST00000427276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.12□□□□□ -0.95
LINC01108-201ENST00000427276 IQSEC2Q5JU85 1478 aa9.12□□□□□ -0.95
LINC01108-201ENST00000427276 PPRC1Q5VV67 1664 aaKnown RBP9.12□□□□□ -0.95
LINC01108-201ENST00000427276 SPDYE4A6NLX3 237 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms