RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
PKP4-205ENST00000426248 GRPEL1Q9HAV7 217 aa19.92■□□□□ 0.78
PKP4-205ENST00000426248 NPHP4O75161 1426 aaPredicted RBP19.91■□□□□ 0.78
PKP4-205ENST00000426248 NLRP2Q9NX02 1062 aa19.91■□□□□ 0.78
PKP4-205ENST00000426248 ADGRB1O14514 1584 aa19.91■□□□□ 0.78
PKP4-205ENST00000426248 NPC1L1Q9UHC9 1359 aa19.91■□□□□ 0.78
PKP4-205ENST00000426248 CALD1Q05682 793 aaKnown RBP19.91■□□□□ 0.78
PKP4-205ENST00000426248 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
PKP4-205ENST00000426248 SETBP1Q9Y6X0 1596 aa19.9■□□□□ 0.78
PKP4-205ENST00000426248 TMPOP42166 694 aaKnown RBP19.9■□□□□ 0.78
PKP4-205ENST00000426248 LMOD3Q0VAK6 560 aa19.9■□□□□ 0.78
PKP4-205ENST00000426248 USHBP1Q8N6Y0 703 aa19.9■□□□□ 0.78
PKP4-205ENST00000426248 ADAMTS13Q76LX8 1427 aa19.89■□□□□ 0.78
PKP4-205ENST00000426248 PPLO60437 1756 aa19.89■□□□□ 0.77
PKP4-205ENST00000426248 FCHSD2O94868 740 aa19.89■□□□□ 0.77
PKP4-205ENST00000426248 FGD1P98174 961 aa19.89■□□□□ 0.77
PKP4-205ENST00000426248 RIMS1Q86UR5 1692 aaKnown RBP19.89■□□□□ 0.77
PKP4-205ENST00000426248 PLEKHG3A1L390 1219 aa19.88■□□□□ 0.77
PKP4-205ENST00000426248 PTPRMP28827 1452 aa19.88■□□□□ 0.77
PKP4-205ENST00000426248 DCTN1Q14203 1278 aa19.88■□□□□ 0.77
PKP4-205ENST00000426248 DNTTIP2Q5QJE6 756 aaKnown RBP19.88■□□□□ 0.77
PKP4-205ENST00000426248 NGEFQ8N5V2 710 aa19.87■□□□□ 0.77
PKP4-205ENST00000426248 MYO5BQ9ULV0 1848 aa19.87■□□□□ 0.77
PKP4-205ENST00000426248 MCM4P33991 863 aa19.87■□□□□ 0.77
PKP4-205ENST00000426248 POLR3AO14802 1390 aaPredicted RBP19.87■□□□□ 0.77
PKP4-205ENST00000426248 FAM135BQ49AJ0 1406 aa19.86■□□□□ 0.77
PKP4-205ENST00000426248 PIP4K2BP78356 416 aa19.86■□□□□ 0.77
PKP4-205ENST00000426248 CABLES1Q8TDN4 633 aa19.86■□□□□ 0.77
PKP4-205ENST00000426248 BBXQ8WY36 941 aaPredicted RBP19.86■□□□□ 0.77
PKP4-205ENST00000426248 AEBP1Q8IUX7 1158 aa19.86■□□□□ 0.77
PKP4-205ENST00000426248 QRICH2Q9H0J4 1663 aa19.86■□□□□ 0.77
PKP4-205ENST00000426248 LAMC1P11047 1609 aa19.85■□□□□ 0.77
PKP4-205ENST00000426248 EVA1CP58658 441 aa19.85■□□□□ 0.77
PKP4-205ENST00000426248 TULP4Q9NRJ4 1543 aa19.85■□□□□ 0.77
PKP4-205ENST00000426248 BCAR3O75815 825 aa19.85■□□□□ 0.77
PKP4-205ENST00000426248 EDC4Q6P2E9 1401 aaKnown RBP19.85■□□□□ 0.77
PKP4-205ENST00000426248 MSH6P52701 1360 aa19.85■□□□□ 0.77
PKP4-205ENST00000426248 FER1L4A9Z1Z3 1794 aa19.84■□□□□ 0.77
PKP4-205ENST00000426248 EXOSC9Q06265 439 aaKnown RBP19.84■□□□□ 0.77
PKP4-205ENST00000426248 IQGAP1P46940 1657 aa19.84■□□□□ 0.77
PKP4-205ENST00000426248 SLFN5Q08AF3 891 aa19.84■□□□□ 0.77
PKP4-205ENST00000426248 FOXD4L1Q9NU39 408 aa19.84■□□□□ 0.77
PKP4-205ENST00000426248 TTC21AQ8NDW8 1320 aa19.84■□□□□ 0.77
PKP4-205ENST00000426248 CCDC9Q9Y3X0 531 aaKnown RBP19.83■□□□□ 0.76
PKP4-205ENST00000426248 MAP3K19Q56UN5 1328 aa19.83■□□□□ 0.76
PKP4-205ENST00000426248 NECTIN2Q92692 538 aa19.83■□□□□ 0.76
PKP4-205ENST00000426248 CDK11BP21127 795 aaKnown RBP19.82■□□□□ 0.76
PKP4-205ENST00000426248 NEURL4Q96JN8 1562 aa19.82■□□□□ 0.76
PKP4-205ENST00000426248 TMEM94Q12767 1356 aa19.82■□□□□ 0.76
PKP4-205ENST00000426248 EIF4A2Q14240 407 aaKnown RBP19.82■□□□□ 0.76
PKP4-205ENST00000426248 COG6Q9Y2V7 657 aa19.82■□□□□ 0.76
PKP4-205ENST00000426248 MFAP1P55081 439 aaKnown RBP19.81■□□□□ 0.76
PKP4-205ENST00000426248 KCNH5Q8NCM2 988 aa19.81■□□□□ 0.76
PKP4-205ENST00000426248 CHRNA2Q15822 529 aa19.81■□□□□ 0.76
PKP4-205ENST00000426248 BCL11BQ9C0K0 894 aaPredicted RBP19.81■□□□□ 0.76
PKP4-205ENST00000426248 STRN4Q9NRL3 753 aa19.81■□□□□ 0.76
PKP4-205ENST00000426248 PRDM11Q9NQV5 511 aa19.81■□□□□ 0.76
PKP4-205ENST00000426248 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
PKP4-205ENST00000426248 KIAA1210Q9ULL0 1709 aa19.81■□□□□ 0.76
PKP4-205ENST00000426248 PTPRUQ92729 1446 aa19.8■□□□□ 0.76
PKP4-205ENST00000426248 ITPRIPQ8IWB1 547 aa19.8■□□□□ 0.76
PKP4-205ENST00000426248 HSCBQ8IWL3 235 aa19.8■□□□□ 0.76
PKP4-205ENST00000426248 PHACTR3Q96KR7 559 aa19.8■□□□□ 0.76
PKP4-205ENST00000426248 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
PKP4-205ENST00000426248 NFE2L2Q16236 605 aa19.8■□□□□ 0.76
PKP4-205ENST00000426248 MCM10Q7L590 875 aa19.8■□□□□ 0.76
PKP4-205ENST00000426248 C1orf141Q5JVX7 400 aa19.79■□□□□ 0.76
PKP4-205ENST00000426248 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.79■□□□□ 0.76
PKP4-205ENST00000426248 RAPGEF4Q8WZA2 1011 aa19.79■□□□□ 0.76
PKP4-205ENST00000426248 TEFQ10587 303 aa19.79■□□□□ 0.76
PKP4-205ENST00000426248 DUSP27Q5VZP5 1158 aa19.79■□□□□ 0.76
PKP4-205ENST00000426248 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
PKP4-205ENST00000426248 SEC24BO95487 1268 aa19.78■□□□□ 0.76
PKP4-205ENST00000426248 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
PKP4-205ENST00000426248 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
PKP4-205ENST00000426248 GNAI1P63096 354 aa19.78■□□□□ 0.76
PKP4-205ENST00000426248 WDR63Q8IWG1 891 aa19.78■□□□□ 0.76
PKP4-205ENST00000426248 CHMP5Q9NZZ3 219 aa19.77■□□□□ 0.76
PKP4-205ENST00000426248 SETD1BQ9UPS6 1966 aaKnown RBP19.77■□□□□ 0.76
PKP4-205ENST00000426248 PANK1Q8TE04 598 aa19.77■□□□□ 0.76
PKP4-205ENST00000426248 TSPYL4Q9UJ04 414 aa19.77■□□□□ 0.75
PKP4-205ENST00000426248 DDX11L8A8MPP1 907 aa19.76■□□□□ 0.75
PKP4-205ENST00000426248 IPO8O15397 1037 aaKnown RBP19.76■□□□□ 0.75
PKP4-205ENST00000426248 MAPK8IP2Q13387 824 aaPredicted RBP19.76■□□□□ 0.75
PKP4-205ENST00000426248 ERBB4Q15303 1308 aa19.76■□□□□ 0.75
PKP4-205ENST00000426248 KDM4FA0A1W2PPD8 638 aa19.76■□□□□ 0.75
PKP4-205ENST00000426248 GCP02774 474 aa19.76■□□□□ 0.75
PKP4-205ENST00000426248 PTMAP06454 111 aaKnown RBP19.76■□□□□ 0.75
PKP4-205ENST00000426248 HSP90AB1P08238 724 aaKnown RBP19.76■□□□□ 0.75
PKP4-205ENST00000426248 CEP170BQ9Y4F5 1589 aaPredicted RBP19.76■□□□□ 0.75
PKP4-205ENST00000426248 UQCRHLA0A096LP55 91 aa19.75■□□□□ 0.75
PKP4-205ENST00000426248 UQCRHP07919 91 aa19.75■□□□□ 0.75
PKP4-205ENST00000426248 PIK3R4Q99570 1358 aa19.75■□□□□ 0.75
PKP4-205ENST00000426248 TBC1D2Q9BYX2 928 aa19.75■□□□□ 0.75
PKP4-205ENST00000426248 NPHP3Q7Z494 1330 aa19.75■□□□□ 0.75
PKP4-205ENST00000426248 MAP7D2Q96T17 732 aa19.74■□□□□ 0.75
PKP4-205ENST00000426248 NUTM2BA6NNL0 878 aaPredicted RBP19.74■□□□□ 0.75
PKP4-205ENST00000426248 NUTM2EB1AL46 878 aaPredicted RBP19.74■□□□□ 0.75
PKP4-205ENST00000426248 NUTM2AQ8IVF1 878 aaPredicted RBP19.74■□□□□ 0.75
PKP4-205ENST00000426248 GOLGA6L22H0YM25 854 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms