RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 TMF1P82094 1093 aa12.55□□□□□ -0.4
TPM3P4-201ENST00000425942 ORAI2Q96SN7 254 aa12.55□□□□□ -0.4
TPM3P4-201ENST00000425942 SPATA31A6Q5VVP1 1343 aa12.55□□□□□ -0.4
TPM3P4-201ENST00000425942 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 ANKRD26Q9UPS8 1709 aa12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 PLEKHG3A1L390 1219 aa12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 PNPLA6Q8IY17 1366 aa12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 USP6P35125 1406 aa12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
TPM3P4-201ENST00000425942 ZEB1P37275 1124 aaPredicted RBP12.53□□□□□ -0.4
TPM3P4-201ENST00000425942 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
TPM3P4-201ENST00000425942 NUTM2FA1L443 756 aa12.52□□□□□ -0.41
TPM3P4-201ENST00000425942 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
TPM3P4-201ENST00000425942 PSME1Q06323 249 aa12.52□□□□□ -0.41
TPM3P4-201ENST00000425942 CD163L1Q9NR16 1453 aa12.52□□□□□ -0.41
TPM3P4-201ENST00000425942 CABP2Q9NPB3 220 aa12.51□□□□□ -0.41
TPM3P4-201ENST00000425942 ANKRD36BQ8N2N9 1353 aa12.51□□□□□ -0.41
TPM3P4-201ENST00000425942 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
TPM3P4-201ENST00000425942 PLCH1Q4KWH8 1693 aa12.51□□□□□ -0.41
TPM3P4-201ENST00000425942 FOXO3O43524 673 aa12.5□□□□□ -0.41
TPM3P4-201ENST00000425942 NGDNQ8NEJ9 315 aaKnown RBP12.5□□□□□ -0.41
TPM3P4-201ENST00000425942 SPATA31A3Q5VYP0 1347 aa12.5□□□□□ -0.41
TPM3P4-201ENST00000425942 SSH2Q76I76 1423 aa12.5□□□□□ -0.41
TPM3P4-201ENST00000425942 ABCC6O95255 1503 aa12.5□□□□□ -0.41
TPM3P4-201ENST00000425942 COL14A1Q05707 1796 aaKnown RBP12.49□□□□□ -0.41
TPM3P4-201ENST00000425942 LRP6O75581 1613 aa12.49□□□□□ -0.41
TPM3P4-201ENST00000425942 SLIT3O75094 1523 aa12.49□□□□□ -0.41
TPM3P4-201ENST00000425942 ACEP12821 1306 aa12.49□□□□□ -0.41
TPM3P4-201ENST00000425942 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
TPM3P4-201ENST00000425942 HSPA5P11021 654 aaKnown RBP12.48□□□□□ -0.41
TPM3P4-201ENST00000425942 PLCG2P16885 1265 aa12.48□□□□□ -0.41
TPM3P4-201ENST00000425942 KRT28Q7Z3Y7 464 aa12.48□□□□□ -0.41
TPM3P4-201ENST00000425942 PMFBP1Q8TBY8 1022 aa12.48□□□□□ -0.41
TPM3P4-201ENST00000425942 A0A1W2PP64 1363 aa12.47□□□□□ -0.41
TPM3P4-201ENST00000425942 KTN1Q86UP2 1357 aaKnown RBP12.47□□□□□ -0.41
TPM3P4-201ENST00000425942 TTC21AQ8NDW8 1320 aa12.47□□□□□ -0.41
TPM3P4-201ENST00000425942 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
TPM3P4-201ENST00000425942 NRAPQ86VF7 1730 aa12.47□□□□□ -0.41
TPM3P4-201ENST00000425942 LTN1O94822 1766 aa12.46□□□□□ -0.41
TPM3P4-201ENST00000425942 MAMSTRQ6ZN01 415 aa12.46□□□□□ -0.41
TPM3P4-201ENST00000425942 HDGFL2Q7Z4V5 671 aaPredicted RBP12.46□□□□□ -0.41
TPM3P4-201ENST00000425942 DDX17Q92841 729 aaKnown RBP12.46□□□□□ -0.41
TPM3P4-201ENST00000425942 GOLGA2Q08379 1002 aa12.45□□□□□ -0.42
TPM3P4-201ENST00000425942 OCEL1Q9H607 264 aa12.45□□□□□ -0.42
TPM3P4-201ENST00000425942 CABP1Q9NZU7 370 aa12.45□□□□□ -0.42
TPM3P4-201ENST00000425942 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
TPM3P4-201ENST00000425942 MKRN3Q13064 507 aaKnown RBP12.44□□□□□ -0.42
TPM3P4-201ENST00000425942 SCUBE2Q9NQ36 999 aa12.44□□□□□ -0.42
TPM3P4-201ENST00000425942 LMO7Q8WWI1 1683 aa12.44□□□□□ -0.42
TPM3P4-201ENST00000425942 USP19O94966 1318 aa12.43□□□□□ -0.42
TPM3P4-201ENST00000425942 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
TPM3P4-201ENST00000425942 OVOS2A0A0J9YW53 1432 aa12.43□□□□□ -0.42
TPM3P4-201ENST00000425942 OVOS2Q6IE36 1432 aa12.43□□□□□ -0.42
TPM3P4-201ENST00000425942 NFAT5O94916 1531 aa12.42□□□□□ -0.42
TPM3P4-201ENST00000425942 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
TPM3P4-201ENST00000425942 USP31Q70CQ4 1352 aa12.42□□□□□ -0.42
TPM3P4-201ENST00000425942 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
TPM3P4-201ENST00000425942 TTC21BQ7Z4L5 1316 aa12.4□□□□□ -0.42
TPM3P4-201ENST00000425942 WNK3Q9BYP7 1800 aa12.4□□□□□ -0.42
TPM3P4-201ENST00000425942 PDCD7Q8N8D1 485 aaKnown RBP12.4□□□□□ -0.42
TPM3P4-201ENST00000425942 NSD2O96028 1365 aa12.4□□□□□ -0.42
TPM3P4-201ENST00000425942 NSD3Q9BZ95 1437 aa12.39□□□□□ -0.43
TPM3P4-201ENST00000425942 SLIT2O94813 1529 aa12.39□□□□□ -0.43
TPM3P4-201ENST00000425942 CPDO75976 1380 aa12.39□□□□□ -0.43
TPM3P4-201ENST00000425942 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
TPM3P4-201ENST00000425942 KIF7Q2M1P5 1343 aa12.38□□□□□ -0.43
TPM3P4-201ENST00000425942 COL18A1P39060 1754 aa12.38□□□□□ -0.43
TPM3P4-201ENST00000425942 ECM2O94769 699 aaPredicted RBP12.38□□□□□ -0.43
TPM3P4-201ENST00000425942 MEX3CQ5U5Q3 659 aaKnown RBP12.38□□□□□ -0.43
TPM3P4-201ENST00000425942 NLRP13Q86W25 1043 aa12.38□□□□□ -0.43
TPM3P4-201ENST00000425942 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
TPM3P4-201ENST00000425942 HAP1P54257 671 aaPredicted RBP12.37□□□□□ -0.43
TPM3P4-201ENST00000425942 ABTB2Q8N961 1025 aa12.37□□□□□ -0.43
TPM3P4-201ENST00000425942 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
TPM3P4-201ENST00000425942 RGPD5Q99666 1765 aa12.36□□□□□ -0.43
TPM3P4-201ENST00000425942 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
TPM3P4-201ENST00000425942 LMOD2Q6P5Q4 547 aa12.36□□□□□ -0.43
TPM3P4-201ENST00000425942 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
TPM3P4-201ENST00000425942 KCNH5Q8NCM2 988 aa12.35□□□□□ -0.43
TPM3P4-201ENST00000425942 CGNL1Q0VF96 1302 aa12.35□□□□□ -0.43
TPM3P4-201ENST00000425942 MAP2P11137 1827 aaKnown RBP12.34□□□□□ -0.43
TPM3P4-201ENST00000425942 CDK12Q9NYV4 1490 aaPredicted RBP12.34□□□□□ -0.43
TPM3P4-201ENST00000425942 RTL1A6NKG5 1358 aa12.34□□□□□ -0.43
TPM3P4-201ENST00000425942 ZNF772Q68DY9 489 aaPredicted RBP12.34□□□□□ -0.43
TPM3P4-201ENST00000425942 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
TPM3P4-201ENST00000425942 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
TPM3P4-201ENST00000425942 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
TPM3P4-201ENST00000425942 NLRP6P59044 892 aa12.33□□□□□ -0.44
TPM3P4-201ENST00000425942 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
TPM3P4-201ENST00000425942 WASHC2AQ641Q2 1341 aa12.33□□□□□ -0.44
TPM3P4-201ENST00000425942 CAMTA1Q9Y6Y1 1673 aa12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 KIAA0232Q92628 1395 aa12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 NPC1L1Q9UHC9 1359 aa12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 ATRNO75882 1429 aa12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 BLMP54132 1417 aaPredicted RBP12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
TPM3P4-201ENST00000425942 EFCAB3Q8N7B9 438 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms