RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 PRKAR2BP31323 418 aa18.84■□□□□ 0.61
CDK3-201ENST00000425876 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
CDK3-201ENST00000425876 ORAI2Q96SN7 254 aa18.84■□□□□ 0.61
CDK3-201ENST00000425876 MST1RQ04912 1400 aa18.83■□□□□ 0.61
CDK3-201ENST00000425876 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.6
CDK3-201ENST00000425876 IL16Q14005 1332 aa18.83■□□□□ 0.6
CDK3-201ENST00000425876 TRIM35Q9UPQ4 493 aa18.82■□□□□ 0.6
CDK3-201ENST00000425876 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
CDK3-201ENST00000425876 HMOX1P09601 288 aa18.81■□□□□ 0.6
CDK3-201ENST00000425876 RIPK4P57078 832 aa18.81■□□□□ 0.6
CDK3-201ENST00000425876 NFE2L2Q16236 605 aa18.81■□□□□ 0.6
CDK3-201ENST00000425876 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
CDK3-201ENST00000425876 MYH16Q9H6N6 1097 aa18.81■□□□□ 0.6
CDK3-201ENST00000425876 RTL1A6NKG5 1358 aa18.8■□□□□ 0.6
CDK3-201ENST00000425876 MSH6P52701 1360 aa18.8■□□□□ 0.6
CDK3-201ENST00000425876 RGPD1P0DJD0 1748 aa18.8■□□□□ 0.6
CDK3-201ENST00000425876 FOXO3O43524 673 aa18.8■□□□□ 0.6
CDK3-201ENST00000425876 TOM1O60784 492 aa18.8■□□□□ 0.6
CDK3-201ENST00000425876 ARHGEF10O15013 1369 aa18.8■□□□□ 0.6
CDK3-201ENST00000425876 AMPHP49418 695 aa18.79■□□□□ 0.6
CDK3-201ENST00000425876 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
CDK3-201ENST00000425876 KCNH5Q8NCM2 988 aa18.79■□□□□ 0.6
CDK3-201ENST00000425876 SOX12O15370 315 aa18.78■□□□□ 0.6
CDK3-201ENST00000425876 TRPM3Q9HCF6 1732 aaPredicted RBP18.78■□□□□ 0.6
CDK3-201ENST00000425876 NFAT5O94916 1531 aa18.77■□□□□ 0.6
CDK3-201ENST00000425876 NUTM2GQ5VZR2 741 aa18.77■□□□□ 0.6
CDK3-201ENST00000425876 KRT28Q7Z3Y7 464 aa18.77■□□□□ 0.6
CDK3-201ENST00000425876 PHACTR3Q96KR7 559 aa18.77■□□□□ 0.6
CDK3-201ENST00000425876 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.76■□□□□ 0.59
CDK3-201ENST00000425876 HOXC9P31274 260 aa18.76■□□□□ 0.59
CDK3-201ENST00000425876 LMOD3Q0VAK6 560 aa18.76■□□□□ 0.59
CDK3-201ENST00000425876 SLIT3O75094 1523 aa18.75■□□□□ 0.59
CDK3-201ENST00000425876 KDRP35968 1356 aa18.75■□□□□ 0.59
CDK3-201ENST00000425876 CT47B1P0C2W7 299 aaPredicted RBP18.75■□□□□ 0.59
CDK3-201ENST00000425876 CALD1Q05682 793 aaKnown RBP18.75■□□□□ 0.59
CDK3-201ENST00000425876 SULT6B1Q6IMI4 303 aa18.75■□□□□ 0.59
CDK3-201ENST00000425876 PHRF1Q9P1Y6 1649 aaKnown RBP18.74■□□□□ 0.59
CDK3-201ENST00000425876 USP19O94966 1318 aa18.74■□□□□ 0.59
CDK3-201ENST00000425876 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
CDK3-201ENST00000425876 ROBO1Q9Y6N7 1651 aa18.73■□□□□ 0.59
CDK3-201ENST00000425876 IP6K1Q92551 441 aa18.72■□□□□ 0.59
CDK3-201ENST00000425876 NPHP3Q7Z494 1330 aa18.72■□□□□ 0.59
CDK3-201ENST00000425876 AEBP1Q8IUX7 1158 aa18.72■□□□□ 0.59
CDK3-201ENST00000425876 FANCIQ9NVI1 1328 aa18.71■□□□□ 0.59
CDK3-201ENST00000425876 ALS2Q96Q42 1657 aa18.7■□□□□ 0.58
CDK3-201ENST00000425876 GCP02774 474 aa18.7■□□□□ 0.58
CDK3-201ENST00000425876 EYA1Q99502 592 aa18.7■□□□□ 0.58
CDK3-201ENST00000425876 PLIN1O60240 522 aa18.69■□□□□ 0.58
CDK3-201ENST00000425876 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
CDK3-201ENST00000425876 LTN1O94822 1766 aa18.69■□□□□ 0.58
CDK3-201ENST00000425876 ARHGEF25Q86VW2 580 aa18.68■□□□□ 0.58
CDK3-201ENST00000425876 SLAIN2Q9P270 581 aa18.68■□□□□ 0.58
CDK3-201ENST00000425876 RARSP54136 660 aaKnown RBP18.68■□□□□ 0.58
CDK3-201ENST00000425876 EXOC6Q8TAG9 804 aa18.67■□□□□ 0.58
CDK3-201ENST00000425876 IFT57Q9NWB7 429 aa18.67■□□□□ 0.58
CDK3-201ENST00000425876 BCAR3O75815 825 aa18.66■□□□□ 0.58
CDK3-201ENST00000425876 HSPA1LP34931 641 aa18.66■□□□□ 0.58
CDK3-201ENST00000425876 GNAI1P63096 354 aa18.66■□□□□ 0.58
CDK3-201ENST00000425876 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
CDK3-201ENST00000425876 PXDNQ92626 1479 aa18.66■□□□□ 0.58
CDK3-201ENST00000425876 ZNF853P0CG23 659 aa18.65■□□□□ 0.58
CDK3-201ENST00000425876 B4GALNT3Q6L9W6 998 aa18.65■□□□□ 0.58
CDK3-201ENST00000425876 TSR2Q969E8 191 aaKnown RBP18.65■□□□□ 0.58
CDK3-201ENST00000425876 TNS3Q68CZ2 1445 aa18.65■□□□□ 0.58
CDK3-201ENST00000425876 PDE3AQ14432 1141 aa18.64■□□□□ 0.58
CDK3-201ENST00000425876 LMOD2Q6P5Q4 547 aa18.64■□□□□ 0.58
CDK3-201ENST00000425876 BRINP3Q76B58 766 aa18.64■□□□□ 0.58
CDK3-201ENST00000425876 EXOSC9Q06265 439 aaKnown RBP18.64■□□□□ 0.57
CDK3-201ENST00000425876 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
CDK3-201ENST00000425876 ZNF428Q96B54 188 aa18.64■□□□□ 0.57
CDK3-201ENST00000425876 CCDC136Q96JN2 1154 aa18.64■□□□□ 0.57
CDK3-201ENST00000425876 CFAP44Q96MT7 982 aa18.63■□□□□ 0.57
CDK3-201ENST00000425876 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
CDK3-201ENST00000425876 MED1Q15648 1581 aaPredicted RBP18.62■□□□□ 0.57
CDK3-201ENST00000425876 SPATA31A3Q5VYP0 1347 aa18.62■□□□□ 0.57
CDK3-201ENST00000425876 HTATSF1O43719 755 aaKnown RBP18.61■□□□□ 0.57
CDK3-201ENST00000425876 C20orf194Q5TEA3 1177 aa18.61■□□□□ 0.57
CDK3-201ENST00000425876 PHLPP1O60346 1717 aa18.61■□□□□ 0.57
CDK3-201ENST00000425876 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
CDK3-201ENST00000425876 DDX17Q92841 729 aaKnown RBP18.59■□□□□ 0.57
CDK3-201ENST00000425876 LTV1Q96GA3 475 aaPredicted RBP18.59■□□□□ 0.57
CDK3-201ENST00000425876 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
CDK3-201ENST00000425876 NCAPD2Q15021 1401 aa18.59■□□□□ 0.57
CDK3-201ENST00000425876 SOS2Q07890 1332 aaPredicted RBP18.59■□□□□ 0.57
CDK3-201ENST00000425876 ABCC6O95255 1503 aa18.59■□□□□ 0.57
CDK3-201ENST00000425876 AHDC1Q5TGY3 1603 aaPredicted RBP18.58■□□□□ 0.57
CDK3-201ENST00000425876 FAM83GA6ND36 823 aa18.58■□□□□ 0.56
CDK3-201ENST00000425876 COL16A1Q07092 1604 aaPredicted RBP18.58■□□□□ 0.56
CDK3-201ENST00000425876 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
CDK3-201ENST00000425876 NHSL1Q5SYE7 1610 aa18.58■□□□□ 0.56
CDK3-201ENST00000425876 NBPF6Q5VWK0 638 aa18.57■□□□□ 0.56
CDK3-201ENST00000425876 NBPF4Q96M43 638 aa18.57■□□□□ 0.56
CDK3-201ENST00000425876 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
CDK3-201ENST00000425876 CANXP27824 592 aaKnown RBP18.56■□□□□ 0.56
CDK3-201ENST00000425876 BRPF1P55201 1214 aaPredicted RBP18.56■□□□□ 0.56
CDK3-201ENST00000425876 RTF1Q92541 710 aaKnown RBP18.56■□□□□ 0.56
CDK3-201ENST00000425876 LAS1LQ9Y4W2 734 aaKnown RBP18.56■□□□□ 0.56
CDK3-201ENST00000425876 CHL1O00533 1208 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 DCTN1Q14203 1278 aa18.55■□□□□ 0.56
CDK3-201ENST00000425876 CRB1P82279 1406 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms