RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 HS6ST3Q8IZP7 471 aa9.86□□□□□ -0.83
CHCHD3P1-201ENST00000425516 CABP1Q9NZU7 370 aa9.86□□□□□ -0.83
CHCHD3P1-201ENST00000425516 BOLA1Q9Y3E2 137 aa9.86□□□□□ -0.83
CHCHD3P1-201ENST00000425516 NKX1-1Q15270 411 aaPredicted RBP9.85□□□□□ -0.83
CHCHD3P1-201ENST00000425516 CDCA8Q53HL2 280 aa9.85□□□□□ -0.83
CHCHD3P1-201ENST00000425516 PMFBP1Q8TBY8 1022 aa9.85□□□□□ -0.83
CHCHD3P1-201ENST00000425516 TAOK2Q9UL54 1235 aa9.85□□□□□ -0.83
CHCHD3P1-201ENST00000425516 TOPAZ1Q8N9V7 1692 aa9.85□□□□□ -0.83
CHCHD3P1-201ENST00000425516 ROBO1Q9Y6N7 1651 aa9.85□□□□□ -0.83
CHCHD3P1-201ENST00000425516 POLR3AO14802 1390 aaPredicted RBP9.85□□□□□ -0.83
CHCHD3P1-201ENST00000425516 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 FOXO3O43524 673 aa9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 TMEM92Q6UXU6 159 aa9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 MICALL2Q8IY33 904 aa9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 DDX17Q92841 729 aaKnown RBP9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 TMEM121BQ9BXQ6 578 aaPredicted RBP9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 SLC12A5Q9H2X9 1139 aa9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 CD163L1Q9NR16 1453 aa9.84□□□□□ -0.83
CHCHD3P1-201ENST00000425516 ACEP12821 1306 aa9.83□□□□□ -0.84
CHCHD3P1-201ENST00000425516 SOS2Q07890 1332 aaPredicted RBP9.83□□□□□ -0.84
CHCHD3P1-201ENST00000425516 KIF7Q2M1P5 1343 aa9.83□□□□□ -0.84
CHCHD3P1-201ENST00000425516 WASHC2AQ641Q2 1341 aa9.83□□□□□ -0.84
CHCHD3P1-201ENST00000425516 CPSF1Q10570 1443 aaKnown RBP9.83□□□□□ -0.84
CHCHD3P1-201ENST00000425516 PPP1R37O75864 691 aa9.83□□□□□ -0.84
CHCHD3P1-201ENST00000425516 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.83□□□□□ -0.84
CHCHD3P1-201ENST00000425516 AHDC1Q5TGY3 1603 aaPredicted RBP9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 C3orf67Q6ZVT6 689 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 CCDC7Q96M83 1385 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 NINLQ9Y2I6 1382 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 KIF1AQ12756 1690 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 ITSN1Q15811 1721 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 NHSL1Q5SYE7 1610 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 NPHP3Q7Z494 1330 aa9.82□□□□□ -0.84
CHCHD3P1-201ENST00000425516 PXDNQ92626 1479 aa9.81□□□□□ -0.84
CHCHD3P1-201ENST00000425516 NLRP6P59044 892 aa9.81□□□□□ -0.84
CHCHD3P1-201ENST00000425516 KRT28Q7Z3Y7 464 aa9.81□□□□□ -0.84
CHCHD3P1-201ENST00000425516 NGDNQ8NEJ9 315 aaKnown RBP9.81□□□□□ -0.84
CHCHD3P1-201ENST00000425516 TMC1Q8TDI8 760 aa9.81□□□□□ -0.84
CHCHD3P1-201ENST00000425516 HSPA1LP34931 641 aa9.8□□□□□ -0.84
CHCHD3P1-201ENST00000425516 PSME1Q06323 249 aa9.8□□□□□ -0.84
CHCHD3P1-201ENST00000425516 FAM163AQ96GL9 167 aaPredicted RBP9.8□□□□□ -0.84
CHCHD3P1-201ENST00000425516 MYOM1P52179 1685 aa9.8□□□□□ -0.84
CHCHD3P1-201ENST00000425516 A0A1W2PP64 1363 aa9.79□□□□□ -0.84
CHCHD3P1-201ENST00000425516 SBNO1A3KN83 1393 aa9.79□□□□□ -0.84
CHCHD3P1-201ENST00000425516 ANKRD36BQ8N2N9 1353 aa9.79□□□□□ -0.84
CHCHD3P1-201ENST00000425516 XPCQ01831 940 aaPredicted RBP9.79□□□□□ -0.84
CHCHD3P1-201ENST00000425516 CARD14Q9BXL6 1004 aa9.79□□□□□ -0.84
CHCHD3P1-201ENST00000425516 USP6P35125 1406 aa9.79□□□□□ -0.84
CHCHD3P1-201ENST00000425516 SPATA31A3Q5VYP0 1347 aa9.79□□□□□ -0.84
CHCHD3P1-201ENST00000425516 COL16A1Q07092 1604 aaPredicted RBP9.78□□□□□ -0.84
CHCHD3P1-201ENST00000425516 BRD4O60885 1362 aaPredicted RBP9.78□□□□□ -0.84
CHCHD3P1-201ENST00000425516 LRRC59Q96AG4 307 aaKnown RBP9.78□□□□□ -0.84
CHCHD3P1-201ENST00000425516 TERF2IPQ9NYB0 399 aa9.78□□□□□ -0.84
CHCHD3P1-201ENST00000425516 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
CHCHD3P1-201ENST00000425516 AKAP12Q02952 1782 aa9.78□□□□□ -0.84
CHCHD3P1-201ENST00000425516 KTN1Q86UP2 1357 aaKnown RBP9.77□□□□□ -0.84
CHCHD3P1-201ENST00000425516 PHLPP1O60346 1717 aa9.77□□□□□ -0.85
CHCHD3P1-201ENST00000425516 ZNF316A6NFI3 1004 aaPredicted RBP9.77□□□□□ -0.85
CHCHD3P1-201ENST00000425516 PER1O15534 1290 aaPredicted RBP9.77□□□□□ -0.85
CHCHD3P1-201ENST00000425516 HDGFL2Q7Z4V5 671 aaPredicted RBP9.77□□□□□ -0.85
CHCHD3P1-201ENST00000425516 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
CHCHD3P1-201ENST00000425516 PANK3Q9H999 370 aa9.77□□□□□ -0.85
CHCHD3P1-201ENST00000425516 TTC21BQ7Z4L5 1316 aa9.77□□□□□ -0.85
CHCHD3P1-201ENST00000425516 EDC4Q6P2E9 1401 aaKnown RBP9.76□□□□□ -0.85
CHCHD3P1-201ENST00000425516 PNPLA6Q8IY17 1366 aa9.75□□□□□ -0.85
CHCHD3P1-201ENST00000425516 TNS3Q68CZ2 1445 aa9.75□□□□□ -0.85
CHCHD3P1-201ENST00000425516 ALS2Q96Q42 1657 aa9.75□□□□□ -0.85
CHCHD3P1-201ENST00000425516 MON2Q7Z3U7 1717 aa9.75□□□□□ -0.85
CHCHD3P1-201ENST00000425516 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
CHCHD3P1-201ENST00000425516 NRKQ7Z2Y5 1582 aa9.75□□□□□ -0.85
CHCHD3P1-201ENST00000425516 ST18O60284 1047 aa9.74□□□□□ -0.85
CHCHD3P1-201ENST00000425516 JCADQ9P266 1359 aa9.74□□□□□ -0.85
CHCHD3P1-201ENST00000425516 G3V3G9 751 aa9.73□□□□□ -0.85
CHCHD3P1-201ENST00000425516 FYB1O15117 783 aa9.73□□□□□ -0.85
CHCHD3P1-201ENST00000425516 ABTB2Q8N961 1025 aa9.73□□□□□ -0.85
CHCHD3P1-201ENST00000425516 ARHGEF10O15013 1369 aa9.73□□□□□ -0.85
CHCHD3P1-201ENST00000425516 USP31Q70CQ4 1352 aa9.73□□□□□ -0.85
CHCHD3P1-201ENST00000425516 NSD3Q9BZ95 1437 aa9.73□□□□□ -0.85
CHCHD3P1-201ENST00000425516 POTEMA6NI47 508 aa9.72□□□□□ -0.85
CHCHD3P1-201ENST00000425516 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
CHCHD3P1-201ENST00000425516 NME9Q86XW9 330 aa9.72□□□□□ -0.85
CHCHD3P1-201ENST00000425516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.72□□□□□ -0.85
CHCHD3P1-201ENST00000425516 USP19O94966 1318 aa9.72□□□□□ -0.85
CHCHD3P1-201ENST00000425516 COL22A1Q8NFW1 1626 aaPredicted RBP9.71□□□□□ -0.85
CHCHD3P1-201ENST00000425516 PIK3C2AO00443 1686 aa9.71□□□□□ -0.85
CHCHD3P1-201ENST00000425516 SHPRHQ149N8 1683 aa9.71□□□□□ -0.85
CHCHD3P1-201ENST00000425516 HOXB3P14651 431 aaPredicted RBP9.71□□□□□ -0.86
CHCHD3P1-201ENST00000425516 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
CHCHD3P1-201ENST00000425516 NLRP13Q86W25 1043 aa9.71□□□□□ -0.86
CHCHD3P1-201ENST00000425516 MED1Q15648 1581 aaPredicted RBP9.71□□□□□ -0.86
CHCHD3P1-201ENST00000425516 LMOD2Q6P5Q4 547 aa9.7□□□□□ -0.86
CHCHD3P1-201ENST00000425516 POTEGQ6S5H5 508 aa9.7□□□□□ -0.86
CHCHD3P1-201ENST00000425516 CABLES1Q8TDN4 633 aa9.7□□□□□ -0.86
CHCHD3P1-201ENST00000425516 SPATA31A6Q5VVP1 1343 aa9.7□□□□□ -0.86
CHCHD3P1-201ENST00000425516 OVOS2A0A0J9YW53 1432 aa9.7□□□□□ -0.86
CHCHD3P1-201ENST00000425516 OVOS2Q6IE36 1432 aa9.7□□□□□ -0.86
CHCHD3P1-201ENST00000425516 USP54Q70EL1 1684 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms