RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 UHRF1BP1Q6BDS2 1440 aa18.43■□□□□ 0.54
SHISA9-201ENST00000423335 CAVIN1Q6NZI2 390 aaKnown RBP18.43■□□□□ 0.54
SHISA9-201ENST00000423335 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
SHISA9-201ENST00000423335 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
SHISA9-201ENST00000423335 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
SHISA9-201ENST00000423335 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
SHISA9-201ENST00000423335 SAMD9LQ8IVG5 1584 aa18.42■□□□□ 0.54
SHISA9-201ENST00000423335 AAMPQ13685 434 aa18.42■□□□□ 0.54
SHISA9-201ENST00000423335 SPINK5Q9NQ38 1064 aaPredicted RBP18.42■□□□□ 0.54
SHISA9-201ENST00000423335 UGGT1Q9NYU2 1555 aa18.42■□□□□ 0.54
SHISA9-201ENST00000423335 DDX58O95786 925 aaKnown RBP18.41■□□□□ 0.54
SHISA9-201ENST00000423335 ANXA1P04083 346 aa18.41■□□□□ 0.54
SHISA9-201ENST00000423335 C8orf34Q49A92 452 aa18.41■□□□□ 0.54
SHISA9-201ENST00000423335 KCNH5Q8NCM2 988 aa18.41■□□□□ 0.54
SHISA9-201ENST00000423335 NASPP49321 788 aaPredicted RBP18.41■□□□□ 0.54
SHISA9-201ENST00000423335 POLKQ9UBT6 870 aa18.41■□□□□ 0.54
SHISA9-201ENST00000423335 REC8O95072 547 aa18.41■□□□□ 0.54
SHISA9-201ENST00000423335 MPNDQ8N594 471 aa18.41■□□□□ 0.54
SHISA9-201ENST00000423335 CCDC85AQ96PX6 553 aaPredicted RBP18.4■□□□□ 0.54
SHISA9-201ENST00000423335 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
SHISA9-201ENST00000423335 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
SHISA9-201ENST00000423335 PCDHB15Q9Y5E8 787 aa18.4■□□□□ 0.54
SHISA9-201ENST00000423335 CCDC30Q5VVM6 783 aa18.39■□□□□ 0.54
SHISA9-201ENST00000423335 PHF23Q9BUL5 403 aaPredicted RBP18.39■□□□□ 0.54
SHISA9-201ENST00000423335 PPIP5K1Q6PFW1 1433 aa18.39■□□□□ 0.54
SHISA9-201ENST00000423335 CDC45O75419 566 aa18.39■□□□□ 0.53
SHISA9-201ENST00000423335 SEC24BO95487 1268 aa18.39■□□□□ 0.53
SHISA9-201ENST00000423335 PLEKHH1Q9ULM0 1364 aa18.39■□□□□ 0.53
SHISA9-201ENST00000423335 F6X3S4 739 aa18.39■□□□□ 0.53
SHISA9-201ENST00000423335 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
SHISA9-201ENST00000423335 NKTRP30414 1462 aaKnown RBP18.39■□□□□ 0.53
SHISA9-201ENST00000423335 GNAT3A8MTJ3 354 aa18.38■□□□□ 0.53
SHISA9-201ENST00000423335 PARD3Q8TEW0 1356 aa18.38■□□□□ 0.53
SHISA9-201ENST00000423335 INTS3Q68E01 1043 aaKnown RBP18.38■□□□□ 0.53
SHISA9-201ENST00000423335 YTHDC2Q9H6S0 1430 aaKnown RBP18.37■□□□□ 0.53
SHISA9-201ENST00000423335 NGLY1Q96IV0 654 aa18.37■□□□□ 0.53
SHISA9-201ENST00000423335 TBX22Q9Y458 520 aa18.37■□□□□ 0.53
SHISA9-201ENST00000423335 ZCCHC11Q5TAX3 1644 aaKnown RBP18.37■□□□□ 0.53
SHISA9-201ENST00000423335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.37■□□□□ 0.53
SHISA9-201ENST00000423335 SURF6O75683 361 aaKnown RBP18.37■□□□□ 0.53
SHISA9-201ENST00000423335 CHD1LQ86WJ1 897 aa18.37■□□□□ 0.53
SHISA9-201ENST00000423335 UBAP1LF5GYI3 381 aa18.37■□□□□ 0.53
SHISA9-201ENST00000423335 PRPF40AO75400 957 aaKnown RBP18.37■□□□□ 0.53
SHISA9-201ENST00000423335 HDAC5Q9UQL6 1122 aa18.37■□□□□ 0.53
SHISA9-201ENST00000423335 TULP1O00294 542 aaPredicted RBP18.36■□□□□ 0.53
SHISA9-201ENST00000423335 KLHL34Q8N239 644 aa18.36■□□□□ 0.53
SHISA9-201ENST00000423335 NEUROD6Q96NK8 337 aa18.36■□□□□ 0.53
SHISA9-201ENST00000423335 GRPEL1Q9HAV7 217 aa18.36■□□□□ 0.53
SHISA9-201ENST00000423335 A0A1W2PP64 1363 aa18.36■□□□□ 0.53
SHISA9-201ENST00000423335 NEK4P51957 841 aa18.36■□□□□ 0.53
SHISA9-201ENST00000423335 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
SHISA9-201ENST00000423335 PHACTR3Q96KR7 559 aa18.35■□□□□ 0.53
SHISA9-201ENST00000423335 NEO1Q92859 1461 aa18.35■□□□□ 0.53
SHISA9-201ENST00000423335 NUCB2P80303 420 aa18.35■□□□□ 0.53
SHISA9-201ENST00000423335 SIL1Q9H173 461 aa18.35■□□□□ 0.53
SHISA9-201ENST00000423335 TOMM22Q9NS69 142 aa18.35■□□□□ 0.53
SHISA9-201ENST00000423335 C19orf44Q9H6X5 657 aa18.35■□□□□ 0.53
SHISA9-201ENST00000423335 ANKRD24Q8TF21 1146 aa18.34■□□□□ 0.53
SHISA9-201ENST00000423335 KRT24Q2M2I5 525 aa18.34■□□□□ 0.53
SHISA9-201ENST00000423335 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
SHISA9-201ENST00000423335 TRIM27P14373 513 aa18.34■□□□□ 0.53
SHISA9-201ENST00000423335 MYO5CQ9NQX4 1742 aa18.34■□□□□ 0.53
SHISA9-201ENST00000423335 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
SHISA9-201ENST00000423335 G3BP1Q13283 466 aaKnown RBP eCLIP18.33■□□□□ 0.53
SHISA9-201ENST00000423335 RLBP1P12271 317 aa18.33■□□□□ 0.52
SHISA9-201ENST00000423335 EIF4A2Q14240 407 aaKnown RBP18.33■□□□□ 0.52
SHISA9-201ENST00000423335 GPATCH3Q96I76 525 aa18.33■□□□□ 0.52
SHISA9-201ENST00000423335 RNF123Q5XPI4 1314 aa18.32■□□□□ 0.52
SHISA9-201ENST00000423335 IFIT2P09913 472 aaKnown RBP18.32■□□□□ 0.52
SHISA9-201ENST00000423335 PIP4K2AP48426 406 aaPredicted RBP18.32■□□□□ 0.52
SHISA9-201ENST00000423335 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
SHISA9-201ENST00000423335 G3V3G9 751 aa18.31■□□□□ 0.52
SHISA9-201ENST00000423335 DCAF8Q5TAQ9 597 aa18.31■□□□□ 0.52
SHISA9-201ENST00000423335 BCL11BQ9C0K0 894 aaPredicted RBP18.31■□□□□ 0.52
SHISA9-201ENST00000423335 SLC39A6Q13433 755 aa18.3■□□□□ 0.52
SHISA9-201ENST00000423335 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
SHISA9-201ENST00000423335 GCP02774 474 aa18.3■□□□□ 0.52
SHISA9-201ENST00000423335 ESPNB1AK53 854 aa18.3■□□□□ 0.52
SHISA9-201ENST00000423335 HSP90B1P14625 803 aaKnown RBP18.3■□□□□ 0.52
SHISA9-201ENST00000423335 RBM10P98175 930 aaKnown RBP18.3■□□□□ 0.52
SHISA9-201ENST00000423335 MSH6P52701 1360 aa18.3■□□□□ 0.52
SHISA9-201ENST00000423335 MAST1Q9Y2H9 1570 aa18.29■□□□□ 0.52
SHISA9-201ENST00000423335 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
SHISA9-201ENST00000423335 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
SHISA9-201ENST00000423335 PANK2Q9BZ23 570 aa18.29■□□□□ 0.52
SHISA9-201ENST00000423335 BICDL1Q6ZP65 573 aa18.29■□□□□ 0.52
SHISA9-201ENST00000423335 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
SHISA9-201ENST00000423335 VPS37CA5D8V6 355 aaPredicted RBP18.28■□□□□ 0.52
SHISA9-201ENST00000423335 JARID2Q92833 1246 aaPredicted RBP18.28■□□□□ 0.52
SHISA9-201ENST00000423335 PHF14O94880 888 aa18.28■□□□□ 0.52
SHISA9-201ENST00000423335 TBC1D32Q96NH3 1257 aa18.28■□□□□ 0.52
SHISA9-201ENST00000423335 IL1RAPL2Q9NP60 686 aa18.28■□□□□ 0.52
SHISA9-201ENST00000423335 DIAPH3Q9NSV4 1193 aa18.28■□□□□ 0.52
SHISA9-201ENST00000423335 METP08581 1390 aa18.28■□□□□ 0.52
SHISA9-201ENST00000423335 NINLQ9Y2I6 1382 aa18.27■□□□□ 0.52
SHISA9-201ENST00000423335 ZFYVE16Q7Z3T8 1539 aa18.27■□□□□ 0.52
SHISA9-201ENST00000423335 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
SHISA9-201ENST00000423335 TMX4Q9H1E5 349 aaPredicted RBP18.27■□□□□ 0.51
SHISA9-201ENST00000423335 MBIPQ9NS73 344 aa18.27■□□□□ 0.51
SHISA9-201ENST00000423335 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms