RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 QRICH2Q9H0J4 1663 aa12.66□□□□□ -0.38
SSPN-202ENST00000422622 RSPH6AQ9H0K4 717 aa12.66□□□□□ -0.38
SSPN-202ENST00000422622 SLKQ9H2G2 1235 aaPredicted RBP12.66□□□□□ -0.38
SSPN-202ENST00000422622 PTPRMP28827 1452 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
SSPN-202ENST00000422622 ZMYM4Q5VZL5 1548 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 RLBP1P12271 317 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 ARID3AQ99856 593 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 STK31Q9BXU1 1019 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 NRXN1Q9ULB1 1477 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 IL13P35225 146 aa12.65□□□□□ -0.38
SSPN-202ENST00000422622 PDE4AP27815 886 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 C1orf141Q5JVX7 400 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 BLMP54132 1417 aaPredicted RBP12.64□□□□□ -0.39
SSPN-202ENST00000422622 DNTTIP2Q5QJE6 756 aaKnown RBP12.64□□□□□ -0.39
SSPN-202ENST00000422622 MBIPQ9NS73 344 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 IQGAP1P46940 1657 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 AGLP35573 1532 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 MS4A1P11836 297 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 EYA1Q99502 592 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 RWDD1Q9H446 243 aaPredicted RBP12.64□□□□□ -0.39
SSPN-202ENST00000422622 MYO5BQ9ULV0 1848 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 SLC4A3P48751 1232 aa12.64□□□□□ -0.39
SSPN-202ENST00000422622 CCDC9Q9Y3X0 531 aaKnown RBP12.64□□□□□ -0.39
SSPN-202ENST00000422622 CENPQQ7L2Z9 268 aaPredicted RBP12.63□□□□□ -0.39
SSPN-202ENST00000422622 TMEM131LA2VDJ0 1609 aa12.63□□□□□ -0.39
SSPN-202ENST00000422622 MPRIPQ6WCQ1 1025 aa12.63□□□□□ -0.39
SSPN-202ENST00000422622 TMEM57Q8N5G2 664 aa12.63□□□□□ -0.39
SSPN-202ENST00000422622 EDC4Q6P2E9 1401 aaKnown RBP12.63□□□□□ -0.39
SSPN-202ENST00000422622 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
SSPN-202ENST00000422622 EVA1CP58658 441 aa12.62□□□□□ -0.39
SSPN-202ENST00000422622 NLRP1Q9C000 1473 aa12.62□□□□□ -0.39
SSPN-202ENST00000422622 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
SSPN-202ENST00000422622 PTMAP06454 111 aaKnown RBP12.62□□□□□ -0.39
SSPN-202ENST00000422622 FKBP5Q13451 457 aaPredicted RBP12.62□□□□□ -0.39
SSPN-202ENST00000422622 C8orf58Q8NAV2 365 aa12.62□□□□□ -0.39
SSPN-202ENST00000422622 TRIM27P14373 513 aa12.62□□□□□ -0.39
SSPN-202ENST00000422622 PLCB2Q00722 1185 aa12.62□□□□□ -0.39
SSPN-202ENST00000422622 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
SSPN-202ENST00000422622 PLEKHG3A1L390 1219 aa12.61□□□□□ -0.39
SSPN-202ENST00000422622 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
SSPN-202ENST00000422622 RAPGEF4Q8WZA2 1011 aa12.61□□□□□ -0.39
SSPN-202ENST00000422622 PPLO60437 1756 aa12.61□□□□□ -0.39
SSPN-202ENST00000422622 LNPKQ9C0E8 428 aa12.61□□□□□ -0.39
SSPN-202ENST00000422622 PIP4K2BP78356 416 aa12.61□□□□□ -0.39
SSPN-202ENST00000422622 IPO9Q96P70 1041 aaKnown RBP12.61□□□□□ -0.39
SSPN-202ENST00000422622 ADAMTS13Q76LX8 1427 aa12.61□□□□□ -0.39
SSPN-202ENST00000422622 GOLGA6L22H0YM25 854 aa12.6□□□□□ -0.39
SSPN-202ENST00000422622 IGHDP01880 384 aa12.6□□□□□ -0.39
SSPN-202ENST00000422622 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
SSPN-202ENST00000422622 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
SSPN-202ENST00000422622 PRDM11Q9NQV5 511 aa12.6□□□□□ -0.39
SSPN-202ENST00000422622 SETBP1Q9Y6X0 1596 aa12.6□□□□□ -0.39
SSPN-202ENST00000422622 F6X3S4 739 aa12.6□□□□□ -0.39
SSPN-202ENST00000422622 C19orf44Q9H6X5 657 aa12.6□□□□□ -0.39
SSPN-202ENST00000422622 GAS2L2Q8NHY3 880 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 GCP02774 474 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 ANXA1P04083 346 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 PLEKHF1Q96S99 279 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 PDE3AQ14432 1141 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 DDX19BQ9UMR2 479 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 LAMC1P11047 1609 aa12.59□□□□□ -0.39
SSPN-202ENST00000422622 HOXC9P31274 260 aa12.58□□□□□ -0.39
SSPN-202ENST00000422622 DDX54Q8TDD1 881 aaKnown RBP12.58□□□□□ -0.4
SSPN-202ENST00000422622 SYTL4Q96C24 671 aaPredicted RBP12.58□□□□□ -0.4
SSPN-202ENST00000422622 ZNF521Q96K83 1311 aa12.58□□□□□ -0.4
SSPN-202ENST00000422622 KIF16BQ96L93 1317 aa12.58□□□□□ -0.4
SSPN-202ENST00000422622 POLR1AO95602 1720 aaPredicted RBP12.58□□□□□ -0.4
SSPN-202ENST00000422622 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
SSPN-202ENST00000422622 MVPQ14764 893 aaKnown RBP12.58□□□□□ -0.4
SSPN-202ENST00000422622 NUTM2BA6NNL0 878 aaPredicted RBP12.57□□□□□ -0.4
SSPN-202ENST00000422622 NUTM2EB1AL46 878 aaPredicted RBP12.57□□□□□ -0.4
SSPN-202ENST00000422622 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
SSPN-202ENST00000422622 TOM1L2Q6ZVM7 507 aa12.57□□□□□ -0.4
SSPN-202ENST00000422622 PCDHB15Q9Y5E8 787 aa12.57□□□□□ -0.4
SSPN-202ENST00000422622 TTC21AQ8NDW8 1320 aa12.57□□□□□ -0.4
SSPN-202ENST00000422622 GNAT3A8MTJ3 354 aa12.57□□□□□ -0.4
SSPN-202ENST00000422622 ANKRD24Q8TF21 1146 aa12.57□□□□□ -0.4
SSPN-202ENST00000422622 SIRT1Q96EB6 747 aa12.57□□□□□ -0.4
SSPN-202ENST00000422622 SPATA31D1Q6ZQQ2 1576 aa12.57□□□□□ -0.4
SSPN-202ENST00000422622 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
SSPN-202ENST00000422622 MFAP1P55081 439 aaKnown RBP12.56□□□□□ -0.4
SSPN-202ENST00000422622 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
SSPN-202ENST00000422622 CFAP44Q96MT7 982 aa12.56□□□□□ -0.4
SSPN-202ENST00000422622 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
SSPN-202ENST00000422622 KCNH5Q8NCM2 988 aa12.56□□□□□ -0.4
SSPN-202ENST00000422622 SETD1BQ9UPS6 1966 aaKnown RBP12.55□□□□□ -0.4
SSPN-202ENST00000422622 NBPF6Q5VWK0 638 aa12.55□□□□□ -0.4
SSPN-202ENST00000422622 NBPF4Q96M43 638 aa12.55□□□□□ -0.4
SSPN-202ENST00000422622 IFT57Q9NWB7 429 aa12.55□□□□□ -0.4
SSPN-202ENST00000422622 HDGFL1Q5TGJ6 251 aa12.55□□□□□ -0.4
SSPN-202ENST00000422622 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
SSPN-202ENST00000422622 USP6P35125 1406 aa12.54□□□□□ -0.4
SSPN-202ENST00000422622 FAM135BQ49AJ0 1406 aa12.54□□□□□ -0.4
SSPN-202ENST00000422622 FLT4P35916 1363 aa12.54□□□□□ -0.4
SSPN-202ENST00000422622 TMEM94Q12767 1356 aa12.54□□□□□ -0.4
SSPN-202ENST00000422622 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms