RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 CLASRPQ8N2M8 674 aaKnown RBP13.08□□□□□ -0.31
PTCH1-206ENST00000421141 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.32
PTCH1-206ENST00000421141 HSPA2P54652 639 aa13.08□□□□□ -0.32
PTCH1-206ENST00000421141 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
PTCH1-206ENST00000421141 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
PTCH1-206ENST00000421141 GNAI2P04899 355 aa13.08□□□□□ -0.32
PTCH1-206ENST00000421141 L1TD1Q5T7N2 865 aaKnown RBP13.08□□□□□ -0.32
PTCH1-206ENST00000421141 SLC4A2P04920 1241 aa13.08□□□□□ -0.32
PTCH1-206ENST00000421141 NSD2O96028 1365 aa13.08□□□□□ -0.32
PTCH1-206ENST00000421141 CCDC158Q5M9N0 1113 aa13.07□□□□□ -0.32
PTCH1-206ENST00000421141 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
PTCH1-206ENST00000421141 RALYLQ86SE5 291 aaKnown RBP13.07□□□□□ -0.32
PTCH1-206ENST00000421141 CT47B1P0C2W7 299 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-206ENST00000421141 CDC42BPAQ5VT25 1732 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 CPLX1O14810 134 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 TTC39AQ5SRH9 613 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 WDR63Q8IWG1 891 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 CNTROBQ8N137 903 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 ABCC1P33527 1531 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 TCOF1Q13428 1488 aaKnown RBP13.06□□□□□ -0.32
PTCH1-206ENST00000421141 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTCH1-206ENST00000421141 ANO2Q9NQ90 1003 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 ACEP12821 1306 aa13.06□□□□□ -0.32
PTCH1-206ENST00000421141 PPIP5K1Q6PFW1 1433 aa13.05□□□□□ -0.32
PTCH1-206ENST00000421141 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
PTCH1-206ENST00000421141 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTCH1-206ENST00000421141 NFE2L2Q16236 605 aa13.05□□□□□ -0.32
PTCH1-206ENST00000421141 BICDL1Q6ZP65 573 aa13.05□□□□□ -0.32
PTCH1-206ENST00000421141 LRRC59Q96AG4 307 aaKnown RBP13.05□□□□□ -0.32
PTCH1-206ENST00000421141 TRPM2O94759 1503 aa13.05□□□□□ -0.32
PTCH1-206ENST00000421141 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTCH1-206ENST00000421141 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-206ENST00000421141 IKQ13123 557 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-206ENST00000421141 NME9Q86XW9 330 aa13.05□□□□□ -0.32
PTCH1-206ENST00000421141 IGHMBP2P38935 993 aaKnown RBP13.05□□□□□ -0.32
PTCH1-206ENST00000421141 AK7Q96M32 723 aa13.04□□□□□ -0.32
PTCH1-206ENST00000421141 CCDC43Q96MW1 224 aaKnown RBP13.04□□□□□ -0.32
PTCH1-206ENST00000421141 ARHGEF5Q12774 1597 aa13.04□□□□□ -0.32
PTCH1-206ENST00000421141 HIP1O00291 1037 aa13.04□□□□□ -0.32
PTCH1-206ENST00000421141 ABCA8O94911 1581 aa13.04□□□□□ -0.32
PTCH1-206ENST00000421141 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
PTCH1-206ENST00000421141 ATP6V1DQ9Y5K8 247 aa13.03□□□□□ -0.32
PTCH1-206ENST00000421141 SURF6O75683 361 aaKnown RBP13.03□□□□□ -0.32
PTCH1-206ENST00000421141 SART3Q15020 963 aaKnown RBP13.03□□□□□ -0.32
PTCH1-206ENST00000421141 HSP90AB3PQ58FF7 597 aa13.03□□□□□ -0.32
PTCH1-206ENST00000421141 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-206ENST00000421141 TAF7Q15545 349 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-206ENST00000421141 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.32
PTCH1-206ENST00000421141 BCL11BQ9C0K0 894 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-206ENST00000421141 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.33
PTCH1-206ENST00000421141 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.33
PTCH1-206ENST00000421141 PHF14O94880 888 aa13.01□□□□□ -0.33
PTCH1-206ENST00000421141 ANKRD24Q8TF21 1146 aa13.01□□□□□ -0.33
PTCH1-206ENST00000421141 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
PTCH1-206ENST00000421141 MCTP1Q6DN14 999 aa13.01□□□□□ -0.33
PTCH1-206ENST00000421141 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
PTCH1-206ENST00000421141 NOB1Q9ULX3 412 aaKnown RBP13□□□□□ -0.33
PTCH1-206ENST00000421141 TTC37Q6PGP7 1564 aa13□□□□□ -0.33
PTCH1-206ENST00000421141 RFC4P35249 363 aa13□□□□□ -0.33
PTCH1-206ENST00000421141 IFNL2Q8IZJ0 200 aa13□□□□□ -0.33
PTCH1-206ENST00000421141 BRMS1Q9HCU9 246 aa13□□□□□ -0.33
PTCH1-206ENST00000421141 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
PTCH1-206ENST00000421141 FSD1Q9BTV5 496 aa12.99□□□□□ -0.33
PTCH1-206ENST00000421141 ANKIB1Q9P2G1 1089 aa12.99□□□□□ -0.33
PTCH1-206ENST00000421141 XBP1P17861 261 aa12.99□□□□□ -0.33
PTCH1-206ENST00000421141 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
PTCH1-206ENST00000421141 ZSCAN25Q6NSZ9 544 aa12.99□□□□□ -0.33
PTCH1-206ENST00000421141 DNAJC2Q99543 621 aaKnown RBP12.99□□□□□ -0.33
PTCH1-206ENST00000421141 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
PTCH1-206ENST00000421141 A0A087WZG4 1122 aa12.99□□□□□ -0.33
PTCH1-206ENST00000421141 SAFBQ15424 915 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTCH1-206ENST00000421141 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
PTCH1-206ENST00000421141 CREBRFQ8IUR6 639 aa12.98□□□□□ -0.33
PTCH1-206ENST00000421141 FMNL2Q96PY5 1086 aa12.98□□□□□ -0.33
PTCH1-206ENST00000421141 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
PTCH1-206ENST00000421141 NPATQ14207 1427 aa12.98□□□□□ -0.33
PTCH1-206ENST00000421141 CHRNA2Q15822 529 aa12.98□□□□□ -0.33
PTCH1-206ENST00000421141 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
PTCH1-206ENST00000421141 LARP1Q6PKG0 1096 aaKnown RBP12.98□□□□□ -0.33
PTCH1-206ENST00000421141 SLKQ9H2G2 1235 aaPredicted RBP12.97□□□□□ -0.33
PTCH1-206ENST00000421141 HYPKQ9NX55 129 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 KDM5DQ9BY66 1539 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 PSMA5P28066 241 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 TMOD2Q9NZR1 351 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 ASXL1Q8IXJ9 1541 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 NACAP1Q9BZK3 213 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 LNPKQ9C0E8 428 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 ST5P78524 1137 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 DDB1Q16531 1140 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 EXOC6Q8TAG9 804 aa12.97□□□□□ -0.33
PTCH1-206ENST00000421141 TPM2P07951 284 aa12.96□□□□□ -0.33
PTCH1-206ENST00000421141 SIL1Q9H173 461 aa12.96□□□□□ -0.33
PTCH1-206ENST00000421141 MCM10Q7L590 875 aa12.96□□□□□ -0.33
PTCH1-206ENST00000421141 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
PTCH1-206ENST00000421141 HOOK1Q9UJC3 728 aaKnown RBP12.96□□□□□ -0.33
PTCH1-206ENST00000421141 WDHD1O75717 1129 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms