RNA–Protein interactions for RNA: ENST00000420077.5

SEMA4F-204, Transcript of ssemaphorin 4F, humanhuman

TSL 1 (best)

Gene SEMA4F, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4F-204ENST00000420077 NCKAP5LQ9HCH0 1330 aa21.37■■□□□ 1.01
SEMA4F-204ENST00000420077 IPO8O15397 1037 aaKnown RBP21.37■■□□□ 1.01
SEMA4F-204ENST00000420077 ZNF428Q96B54 188 aa21.37■■□□□ 1.01
SEMA4F-204ENST00000420077 COG3Q96JB2 828 aa21.37■■□□□ 1.01
SEMA4F-204ENST00000420077 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
SEMA4F-204ENST00000420077 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.36■■□□□ 1.01
SEMA4F-204ENST00000420077 BRPF1P55201 1214 aaPredicted RBP21.36■■□□□ 1.01
SEMA4F-204ENST00000420077 TMEM57Q8N5G2 664 aa21.36■■□□□ 1.01
SEMA4F-204ENST00000420077 PRR36Q9H6K5 1346 aa21.35■■□□□ 1.01
SEMA4F-204ENST00000420077 LTKP29376 864 aa21.35■■□□□ 1.01
SEMA4F-204ENST00000420077 CALD1Q05682 793 aaKnown RBP21.35■■□□□ 1.01
SEMA4F-204ENST00000420077 ROBO2Q9HCK4 1378 aa21.35■■□□□ 1.01
SEMA4F-204ENST00000420077 ZNF692Q9BU19 519 aaPredicted RBP21.33■■□□□ 1.01
SEMA4F-204ENST00000420077 ZBTB40Q9NUA8 1239 aa21.33■■□□□ 1.01
SEMA4F-204ENST00000420077 RIMS1Q86UR5 1692 aaKnown RBP21.33■■□□□ 1.01
SEMA4F-204ENST00000420077 IFT57Q9NWB7 429 aa21.32■■□□□ 1
SEMA4F-204ENST00000420077 RRS1Q15050 365 aaKnown RBP21.31■■□□□ 1
SEMA4F-204ENST00000420077 GNAI1P63096 354 aa21.31■■□□□ 1
SEMA4F-204ENST00000420077 NFKBIBQ15653 356 aa21.31■■□□□ 1
SEMA4F-204ENST00000420077 THUMPD2Q9BTF0 503 aaKnown RBP21.31■■□□□ 1
SEMA4F-204ENST00000420077 PLEKHG1Q9ULL1 1385 aa21.31■■□□□ 1
SEMA4F-204ENST00000420077 ZNF853P0CG23 659 aa21.3■■□□□ 1
SEMA4F-204ENST00000420077 SMC5Q8IY18 1101 aa21.3■■□□□ 1
SEMA4F-204ENST00000420077 NALCNQ8IZF0 1738 aa21.3■■□□□ 1
SEMA4F-204ENST00000420077 SLC26A8Q96RN1 970 aa21.3■■□□□ 1
SEMA4F-204ENST00000420077 PTCH1Q13635 1447 aa21.29■■□□□ 1
SEMA4F-204ENST00000420077 VAMP4O75379 141 aa21.29■■□□□ 1
SEMA4F-204ENST00000420077 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
SEMA4F-204ENST00000420077 UPF2Q9HAU5 1272 aaKnown RBP21.29■■□□□ 1
SEMA4F-204ENST00000420077 TBC1D32Q96NH3 1257 aa21.28■■□□□ 1
SEMA4F-204ENST00000420077 PIK3R4Q99570 1358 aa21.28■■□□□ 1
SEMA4F-204ENST00000420077 OVOS2A0A0J9YW53 1432 aa21.27■■□□□ 1
SEMA4F-204ENST00000420077 OVOS2Q6IE36 1432 aa21.27■■□□□ 1
SEMA4F-204ENST00000420077 MRPL50Q8N5N7 158 aaKnown RBP21.27■■□□□ 1
SEMA4F-204ENST00000420077 MBIPQ9NS73 344 aa21.27■■□□□ 1
SEMA4F-204ENST00000420077 ARHGAP45Q92619 1136 aa21.26■□□□□ 0.99
SEMA4F-204ENST00000420077 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
SEMA4F-204ENST00000420077 BECN1Q14457 450 aa21.25■□□□□ 0.99
SEMA4F-204ENST00000420077 CFAP44Q96MT7 982 aa21.25■□□□□ 0.99
SEMA4F-204ENST00000420077 TTC21BQ7Z4L5 1316 aa21.25■□□□□ 0.99
SEMA4F-204ENST00000420077 EID1Q9Y6B2 187 aa21.24■□□□□ 0.99
SEMA4F-204ENST00000420077 USP6P35125 1406 aa21.24■□□□□ 0.99
SEMA4F-204ENST00000420077 PEAK1Q9H792 1746 aa21.24■□□□□ 0.99
SEMA4F-204ENST00000420077 PLEKHG3A1L390 1219 aa21.23■□□□□ 0.99
SEMA4F-204ENST00000420077 ACEP12821 1306 aa21.23■□□□□ 0.99
SEMA4F-204ENST00000420077 RGPD1P0DJD0 1748 aa21.23■□□□□ 0.99
SEMA4F-204ENST00000420077 PTPRUQ92729 1446 aa21.23■□□□□ 0.99
SEMA4F-204ENST00000420077 TWISTNBQ3B726 338 aaPredicted RBP21.21■□□□□ 0.99
SEMA4F-204ENST00000420077 THEMISQ8N1K5 641 aaPredicted RBP21.21■□□□□ 0.99
SEMA4F-204ENST00000420077 EIF4A2Q14240 407 aaKnown RBP21.21■□□□□ 0.99
SEMA4F-204ENST00000420077 CHMP4BQ9H444 224 aaKnown RBP21.21■□□□□ 0.99
SEMA4F-204ENST00000420077 SLIT1O75093 1534 aa21.21■□□□□ 0.99
SEMA4F-204ENST00000420077 ABCC4O15439 1325 aa21.2■□□□□ 0.98
SEMA4F-204ENST00000420077 ZBTB7BO15156 539 aaPredicted RBP21.2■□□□□ 0.98
SEMA4F-204ENST00000420077 NUCB1Q02818 461 aa21.2■□□□□ 0.98
SEMA4F-204ENST00000420077 FAM83GA6ND36 823 aa21.2■□□□□ 0.98
SEMA4F-204ENST00000420077 FMN2Q9NZ56 1722 aa21.2■□□□□ 0.98
SEMA4F-204ENST00000420077 ARHGAP23Q9P227 1491 aa21.19■□□□□ 0.98
SEMA4F-204ENST00000420077 USP31Q70CQ4 1352 aa21.19■□□□□ 0.98
SEMA4F-204ENST00000420077 ELL2O00472 640 aaPredicted RBP21.19■□□□□ 0.98
SEMA4F-204ENST00000420077 C8orf58Q8NAV2 365 aa21.19■□□□□ 0.98
SEMA4F-204ENST00000420077 SSH2Q76I76 1423 aa21.18■□□□□ 0.98
SEMA4F-204ENST00000420077 ADAMTSL3P82987 1691 aa21.18■□□□□ 0.98
SEMA4F-204ENST00000420077 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
SEMA4F-204ENST00000420077 TBX22Q9Y458 520 aa21.17■□□□□ 0.98
SEMA4F-204ENST00000420077 DCTN1Q14203 1278 aa21.16■□□□□ 0.98
SEMA4F-204ENST00000420077 SULT6B1Q6IMI4 303 aa21.16■□□□□ 0.98
SEMA4F-204ENST00000420077 NUTM2FA1L443 756 aa21.16■□□□□ 0.98
SEMA4F-204ENST00000420077 RGPD8O14715 1765 aaPredicted RBP21.16■□□□□ 0.98
SEMA4F-204ENST00000420077 FRAT2O75474 233 aaPredicted RBP21.15■□□□□ 0.98
SEMA4F-204ENST00000420077 CHD1LQ86WJ1 897 aa21.15■□□□□ 0.98
SEMA4F-204ENST00000420077 AMOTL2Q9Y2J4 779 aa21.15■□□□□ 0.98
SEMA4F-204ENST00000420077 DIP2AQ14689 1571 aa21.14■□□□□ 0.97
SEMA4F-204ENST00000420077 GCC1Q96CN9 775 aa21.14■□□□□ 0.97
SEMA4F-204ENST00000420077 API5Q9BZZ5 524 aaKnown RBP21.14■□□□□ 0.97
SEMA4F-204ENST00000420077 LNPKQ9C0E8 428 aa21.14■□□□□ 0.97
SEMA4F-204ENST00000420077 CEP170BQ9Y4F5 1589 aaPredicted RBP21.14■□□□□ 0.97
SEMA4F-204ENST00000420077 TBC1D2Q9BYX2 928 aa21.13■□□□□ 0.97
SEMA4F-204ENST00000420077 MFAP1P55081 439 aaKnown RBP21.13■□□□□ 0.97
SEMA4F-204ENST00000420077 GSE1Q14687 1217 aa21.13■□□□□ 0.97
SEMA4F-204ENST00000420077 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
SEMA4F-204ENST00000420077 KIF24Q5T7B8 1368 aa21.12■□□□□ 0.97
SEMA4F-204ENST00000420077 C1orf115Q9H7X2 142 aa21.12■□□□□ 0.97
SEMA4F-204ENST00000420077 TTC21AQ8NDW8 1320 aa21.12■□□□□ 0.97
SEMA4F-204ENST00000420077 HSP90AB2PQ58FF8 381 aa21.12■□□□□ 0.97
SEMA4F-204ENST00000420077 XRN1Q8IZH2 1706 aaKnown RBP21.11■□□□□ 0.97
SEMA4F-204ENST00000420077 ANTXR1Q9H6X2 564 aa21.11■□□□□ 0.97
SEMA4F-204ENST00000420077 ARHGEF10O15013 1369 aa21.1■□□□□ 0.97
SEMA4F-204ENST00000420077 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
SEMA4F-204ENST00000420077 PIK3C2AO00443 1686 aa21.09■□□□□ 0.97
SEMA4F-204ENST00000420077 CHL1O00533 1208 aa21.09■□□□□ 0.97
SEMA4F-204ENST00000420077 SIRT2Q8IXJ6 389 aa21.09■□□□□ 0.97
SEMA4F-204ENST00000420077 KIAA0232Q92628 1395 aa21.09■□□□□ 0.97
SEMA4F-204ENST00000420077 HAP1P54257 671 aaPredicted RBP21.08■□□□□ 0.97
SEMA4F-204ENST00000420077 BMP2KLQ5H9B9 411 aa21.08■□□□□ 0.97
SEMA4F-204ENST00000420077 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
SEMA4F-204ENST00000420077 RGS12O14924 1447 aa21.07■□□□□ 0.96
SEMA4F-204ENST00000420077 MAP3K19Q56UN5 1328 aa21.07■□□□□ 0.96
SEMA4F-204ENST00000420077 MCM10Q7L590 875 aa21.07■□□□□ 0.96
SEMA4F-204ENST00000420077 SBNO1A3KN83 1393 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms