RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 MPNDQ8N594 471 aa21.55■■□□□ 1.04
PMS1-206ENST00000418224 IPO8O15397 1037 aaKnown RBP21.55■■□□□ 1.04
PMS1-206ENST00000418224 RNF214Q8ND24 703 aa21.55■■□□□ 1.04
PMS1-206ENST00000418224 ZBTB40Q9NUA8 1239 aa21.55■■□□□ 1.04
PMS1-206ENST00000418224 PTMAP06454 111 aaKnown RBP21.54■■□□□ 1.04
PMS1-206ENST00000418224 UTP14CQ5TAP6 766 aaKnown RBP21.54■■□□□ 1.04
PMS1-206ENST00000418224 ZC3H13Q5T200 1668 aaKnown RBP21.53■■□□□ 1.04
PMS1-206ENST00000418224 NCBP3Q53F19 620 aaKnown RBP21.53■■□□□ 1.04
PMS1-206ENST00000418224 A0A1W2PP64 1363 aa21.53■■□□□ 1.04
PMS1-206ENST00000418224 IBTKQ9P2D0 1353 aaPredicted RBP21.53■■□□□ 1.04
PMS1-206ENST00000418224 FAM177BA6PVY3 158 aa21.53■■□□□ 1.04
PMS1-206ENST00000418224 VGFO15240 615 aaPredicted RBP21.53■■□□□ 1.04
PMS1-206ENST00000418224 PRPF40AO75400 957 aaKnown RBP21.53■■□□□ 1.04
PMS1-206ENST00000418224 RPGRIP1LQ68CZ1 1315 aa21.52■■□□□ 1.04
PMS1-206ENST00000418224 KIF16BQ96L93 1317 aa21.52■■□□□ 1.04
PMS1-206ENST00000418224 TULP4Q9NRJ4 1543 aa21.52■■□□□ 1.04
PMS1-206ENST00000418224 MINK1Q8N4C8 1332 aaPredicted RBP21.52■■□□□ 1.03
PMS1-206ENST00000418224 USP32Q8NFA0 1604 aa21.51■■□□□ 1.03
PMS1-206ENST00000418224 CCDC39Q9UFE4 941 aa21.51■■□□□ 1.03
PMS1-206ENST00000418224 NUCB1Q02818 461 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 LMBRD1Q9NUN5 540 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 ADGRB2O60241 1585 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 PPLO60437 1756 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 KIDINS220Q9ULH0 1771 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 DIAPH1O60610 1272 aaKnown RBP21.5■■□□□ 1.03
PMS1-206ENST00000418224 PKP1Q13835 747 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 ANKRD45Q5TZF3 282 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 CHD1LQ86WJ1 897 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 C1orf115Q9H7X2 142 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 PPP4R3BQ5MIZ7 849 aa21.5■■□□□ 1.03
PMS1-206ENST00000418224 ABCC11Q96J66 1382 aa21.49■■□□□ 1.03
PMS1-206ENST00000418224 SYCE3A1L190 88 aa21.49■■□□□ 1.03
PMS1-206ENST00000418224 CHAMP1Q96JM3 812 aa21.49■■□□□ 1.03
PMS1-206ENST00000418224 FYB1O15117 783 aa21.48■■□□□ 1.03
PMS1-206ENST00000418224 GLI2P10070 1586 aa21.48■■□□□ 1.03
PMS1-206ENST00000418224 LMTK2Q8IWU2 1503 aa21.48■■□□□ 1.03
PMS1-206ENST00000418224 PUS7Q96PZ0 661 aaKnown RBP21.47■■□□□ 1.03
PMS1-206ENST00000418224 TERF2IPQ9NYB0 399 aa21.47■■□□□ 1.03
PMS1-206ENST00000418224 MCM5P33992 734 aa21.47■■□□□ 1.03
PMS1-206ENST00000418224 IL16Q14005 1332 aa21.46■■□□□ 1.03
PMS1-206ENST00000418224 IGSF3O75054 1194 aa21.46■■□□□ 1.03
PMS1-206ENST00000418224 ASXL2Q76L83 1435 aa21.46■■□□□ 1.03
PMS1-206ENST00000418224 ELL2O00472 640 aaPredicted RBP21.46■■□□□ 1.03
PMS1-206ENST00000418224 FOXD4L5Q5VV16 416 aaPredicted RBP21.46■■□□□ 1.03
PMS1-206ENST00000418224 FOXD4L4Q8WXT5 416 aaPredicted RBP21.46■■□□□ 1.03
PMS1-206ENST00000418224 CLEC17AQ6ZS10 378 aa21.45■■□□□ 1.02
PMS1-206ENST00000418224 TBC1D9Q6ZT07 1266 aa21.45■■□□□ 1.02
PMS1-206ENST00000418224 GPT2Q8TD30 523 aa21.45■■□□□ 1.02
PMS1-206ENST00000418224 SPDYE4A6NLX3 237 aa21.45■■□□□ 1.02
PMS1-206ENST00000418224 FBLN1P23142 703 aa21.45■■□□□ 1.02
PMS1-206ENST00000418224 KIAA2012Q0VF49 1180 aa21.45■■□□□ 1.02
PMS1-206ENST00000418224 THUMPD2Q9BTF0 503 aaKnown RBP21.45■■□□□ 1.02
PMS1-206ENST00000418224 ATP2B3Q16720 1220 aa21.44■■□□□ 1.02
PMS1-206ENST00000418224 ZNF710Q8N1W2 664 aa21.44■■□□□ 1.02
PMS1-206ENST00000418224 MYRIPQ8NFW9 859 aa21.44■■□□□ 1.02
PMS1-206ENST00000418224 GTF2E1P29083 439 aaPredicted RBP21.44■■□□□ 1.02
PMS1-206ENST00000418224 ZNF830Q96NB3 372 aaPredicted RBP21.44■■□□□ 1.02
PMS1-206ENST00000418224 PRKAR2BP31323 418 aa21.43■■□□□ 1.02
PMS1-206ENST00000418224 AK9Q5TCS8 1911 aa21.43■■□□□ 1.02
PMS1-206ENST00000418224 PRAM1Q96QH2 718 aa21.43■■□□□ 1.02
PMS1-206ENST00000418224 NUCB2P80303 420 aa21.42■■□□□ 1.02
PMS1-206ENST00000418224 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.42■■□□□ 1.02
PMS1-206ENST00000418224 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.42■■□□□ 1.02
PMS1-206ENST00000418224 TMEM63CQ9P1W3 806 aa21.42■■□□□ 1.02
PMS1-206ENST00000418224 ALDH1L2Q3SY69 923 aa21.42■■□□□ 1.02
PMS1-206ENST00000418224 BMP2KLQ5H9B9 411 aa21.42■■□□□ 1.02
PMS1-206ENST00000418224 HMOX1P09601 288 aa21.41■■□□□ 1.02
PMS1-206ENST00000418224 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
PMS1-206ENST00000418224 LRSAM1Q6UWE0 723 aa21.41■■□□□ 1.02
PMS1-206ENST00000418224 HDGFL2Q7Z4V5 671 aaPredicted RBP21.41■■□□□ 1.02
PMS1-206ENST00000418224 GTPBP4Q9BZE4 634 aaKnown RBP21.41■■□□□ 1.02
PMS1-206ENST00000418224 IDI1Q13907 227 aa21.4■■□□□ 1.02
PMS1-206ENST00000418224 ARHGEF28Q8N1W1 1705 aaKnown RBP21.4■■□□□ 1.02
PMS1-206ENST00000418224 C17orf53Q8N3J3 647 aaPredicted RBP21.4■■□□□ 1.02
PMS1-206ENST00000418224 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.02
PMS1-206ENST00000418224 NPM1P06748 294 aaKnown RBP eCLIP21.38■■□□□ 1.01
PMS1-206ENST00000418224 BCL11BQ9C0K0 894 aaPredicted RBP21.38■■□□□ 1.01
PMS1-206ENST00000418224 CABP1Q9NZU7 370 aa21.38■■□□□ 1.01
PMS1-206ENST00000418224 CAMSAP1Q5T5Y3 1602 aa21.38■■□□□ 1.01
PMS1-206ENST00000418224 ZBTB7BO15156 539 aaPredicted RBP21.37■■□□□ 1.01
PMS1-206ENST00000418224 KIF20AO95235 890 aa21.37■■□□□ 1.01
PMS1-206ENST00000418224 TSPYL6Q8N831 410 aa21.37■■□□□ 1.01
PMS1-206ENST00000418224 FCHSD2O94868 740 aa21.37■■□□□ 1.01
PMS1-206ENST00000418224 ZGPATQ8N5A5 531 aaKnown RBP21.37■■□□□ 1.01
PMS1-206ENST00000418224 ATAD2Q6PL18 1390 aa21.37■■□□□ 1.01
PMS1-206ENST00000418224 GCC1Q96CN9 775 aa21.37■■□□□ 1.01
PMS1-206ENST00000418224 PPIP5K1Q6PFW1 1433 aa21.36■■□□□ 1.01
PMS1-206ENST00000418224 RAPGEF3O95398 923 aa21.36■■□□□ 1.01
PMS1-206ENST00000418224 PHACTR3Q96KR7 559 aa21.36■■□□□ 1.01
PMS1-206ENST00000418224 ABCC3O15438 1527 aa21.35■■□□□ 1.01
PMS1-206ENST00000418224 LETM1O95202 739 aaPredicted RBP21.35■■□□□ 1.01
PMS1-206ENST00000418224 CHMP4BQ9H444 224 aaKnown RBP21.34■■□□□ 1.01
PMS1-206ENST00000418224 CDK19Q9BWU1 502 aa21.34■■□□□ 1.01
PMS1-206ENST00000418224 VAMP4O75379 141 aa21.34■■□□□ 1.01
PMS1-206ENST00000418224 MRPL50Q8N5N7 158 aaKnown RBP21.34■■□□□ 1.01
PMS1-206ENST00000418224 KIF3AQ9Y496 699 aa21.34■■□□□ 1.01
PMS1-206ENST00000418224 FRMPD1Q5SYB0 1578 aa21.34■■□□□ 1.01
PMS1-206ENST00000418224 NEXMIFQ5QGS0 1516 aa21.33■■□□□ 1.01
PMS1-206ENST00000418224 CYP2E1P05181 493 aaPredicted RBP21.33■■□□□ 1
PMS1-206ENST00000418224 NOLC1Q14978 699 aaKnown RBP eCLIP21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms