RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 ESCO1Q5FWF5 840 aa17.75■□□□□ 0.43
LINC00940-201ENST00000418006 PHACTR3Q96KR7 559 aa17.75■□□□□ 0.43
LINC00940-201ENST00000418006 PHF23Q9BUL5 403 aaPredicted RBP17.75■□□□□ 0.43
LINC00940-201ENST00000418006 HSPA2P54652 639 aa17.74■□□□□ 0.43
LINC00940-201ENST00000418006 NLRP6P59044 892 aa17.74■□□□□ 0.43
LINC00940-201ENST00000418006 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
LINC00940-201ENST00000418006 TSR2Q969E8 191 aaKnown RBP17.74■□□□□ 0.43
LINC00940-201ENST00000418006 PNNQ9H307 717 aaKnown RBP17.74■□□□□ 0.43
LINC00940-201ENST00000418006 TRIM35Q9UPQ4 493 aa17.74■□□□□ 0.43
LINC00940-201ENST00000418006 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
LINC00940-201ENST00000418006 NRKQ7Z2Y5 1582 aa17.73■□□□□ 0.43
LINC00940-201ENST00000418006 BCL2L13Q9BXK5 485 aa17.73■□□□□ 0.43
LINC00940-201ENST00000418006 PROSER2Q86WR7 435 aaPredicted RBP17.72■□□□□ 0.43
LINC00940-201ENST00000418006 ABTB2Q8N961 1025 aa17.72■□□□□ 0.43
LINC00940-201ENST00000418006 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.72■□□□□ 0.43
LINC00940-201ENST00000418006 PHF8Q9UPP1 1060 aa17.72■□□□□ 0.43
LINC00940-201ENST00000418006 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
LINC00940-201ENST00000418006 OVOS2A0A0J9YW53 1432 aa17.71■□□□□ 0.43
LINC00940-201ENST00000418006 OVOS2Q6IE36 1432 aa17.71■□□□□ 0.43
LINC00940-201ENST00000418006 TTC21AQ8NDW8 1320 aa17.71■□□□□ 0.43
LINC00940-201ENST00000418006 CDK12Q9NYV4 1490 aaPredicted RBP17.71■□□□□ 0.43
LINC00940-201ENST00000418006 LRRC7Q96NW7 1537 aa17.71■□□□□ 0.43
LINC00940-201ENST00000418006 FRAT2O75474 233 aaPredicted RBP17.71■□□□□ 0.43
LINC00940-201ENST00000418006 CANXP27824 592 aaKnown RBP17.71■□□□□ 0.43
LINC00940-201ENST00000418006 MYH16Q9H6N6 1097 aa17.71■□□□□ 0.43
LINC00940-201ENST00000418006 NALCNQ8IZF0 1738 aa17.71■□□□□ 0.43
LINC00940-201ENST00000418006 EIF4A2Q14240 407 aaKnown RBP17.71■□□□□ 0.42
LINC00940-201ENST00000418006 SSH2Q76I76 1423 aa17.71■□□□□ 0.42
LINC00940-201ENST00000418006 FAM43AQ8N2R8 423 aa17.71■□□□□ 0.42
LINC00940-201ENST00000418006 XPCQ01831 940 aaPredicted RBP17.7■□□□□ 0.42
LINC00940-201ENST00000418006 ANKARQ7Z5J8 1434 aa17.7■□□□□ 0.42
LINC00940-201ENST00000418006 AEBP1Q8IUX7 1158 aa17.69■□□□□ 0.42
LINC00940-201ENST00000418006 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
LINC00940-201ENST00000418006 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
LINC00940-201ENST00000418006 FMN2Q9NZ56 1722 aa17.69■□□□□ 0.42
LINC00940-201ENST00000418006 AMPHP49418 695 aa17.68■□□□□ 0.42
LINC00940-201ENST00000418006 PSME1Q06323 249 aa17.68■□□□□ 0.42
LINC00940-201ENST00000418006 FAM161AQ3B820 660 aa17.68■□□□□ 0.42
LINC00940-201ENST00000418006 C8orf34Q49A92 452 aa17.68■□□□□ 0.42
LINC00940-201ENST00000418006 SULT6B1Q6IMI4 303 aa17.68■□□□□ 0.42
LINC00940-201ENST00000418006 ORAI2Q96SN7 254 aa17.68■□□□□ 0.42
LINC00940-201ENST00000418006 CENPQQ7L2Z9 268 aaPredicted RBP17.67■□□□□ 0.42
LINC00940-201ENST00000418006 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
LINC00940-201ENST00000418006 FOXO3O43524 673 aa17.66■□□□□ 0.42
LINC00940-201ENST00000418006 EXOSC9Q06265 439 aaKnown RBP17.66■□□□□ 0.42
LINC00940-201ENST00000418006 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
LINC00940-201ENST00000418006 NFE2L2Q16236 605 aa17.66■□□□□ 0.42
LINC00940-201ENST00000418006 LMOD2Q6P5Q4 547 aa17.66■□□□□ 0.42
LINC00940-201ENST00000418006 USP31Q70CQ4 1352 aa17.65■□□□□ 0.42
LINC00940-201ENST00000418006 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
LINC00940-201ENST00000418006 FAM83GA6ND36 823 aa17.64■□□□□ 0.41
LINC00940-201ENST00000418006 LTV1Q96GA3 475 aaPredicted RBP17.64■□□□□ 0.41
LINC00940-201ENST00000418006 PIK3C2AO00443 1686 aa17.63■□□□□ 0.41
LINC00940-201ENST00000418006 DCTN1Q14203 1278 aa17.63■□□□□ 0.41
LINC00940-201ENST00000418006 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
LINC00940-201ENST00000418006 PANK1Q8TE04 598 aa17.63■□□□□ 0.41
LINC00940-201ENST00000418006 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
LINC00940-201ENST00000418006 CLUAP1Q96AJ1 413 aa17.61■□□□□ 0.41
LINC00940-201ENST00000418006 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
LINC00940-201ENST00000418006 KDM4FA0A1W2PPD8 638 aa17.6■□□□□ 0.41
LINC00940-201ENST00000418006 COG6Q9Y2V7 657 aa17.6■□□□□ 0.41
LINC00940-201ENST00000418006 SBNO1A3KN83 1393 aa17.59■□□□□ 0.41
LINC00940-201ENST00000418006 FLT4P35916 1363 aa17.59■□□□□ 0.41
LINC00940-201ENST00000418006 C19orf44Q9H6X5 657 aa17.59■□□□□ 0.41
LINC00940-201ENST00000418006 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.41
LINC00940-201ENST00000418006 SMC4Q9NTJ3 1288 aa17.58■□□□□ 0.41
LINC00940-201ENST00000418006 IL16Q14005 1332 aa17.57■□□□□ 0.4
LINC00940-201ENST00000418006 ATF3P18847 181 aa17.57■□□□□ 0.4
LINC00940-201ENST00000418006 HOXC9P31274 260 aa17.57■□□□□ 0.4
LINC00940-201ENST00000418006 EYA1Q99502 592 aa17.57■□□□□ 0.4
LINC00940-201ENST00000418006 TMEM94Q12767 1356 aa17.57■□□□□ 0.4
LINC00940-201ENST00000418006 DDX17Q92841 729 aaKnown RBP17.57■□□□□ 0.4
LINC00940-201ENST00000418006 RGS3P49796 1198 aa17.56■□□□□ 0.4
LINC00940-201ENST00000418006 MCM10Q7L590 875 aa17.55■□□□□ 0.4
LINC00940-201ENST00000418006 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
LINC00940-201ENST00000418006 RLBP1P12271 317 aa17.54■□□□□ 0.4
LINC00940-201ENST00000418006 LMOD3Q0VAK6 560 aa17.54■□□□□ 0.4
LINC00940-201ENST00000418006 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
LINC00940-201ENST00000418006 PDE3AQ14432 1141 aa17.54■□□□□ 0.4
LINC00940-201ENST00000418006 KRT28Q7Z3Y7 464 aa17.54■□□□□ 0.4
LINC00940-201ENST00000418006 NWD1Q149M9 1564 aa17.54■□□□□ 0.4
LINC00940-201ENST00000418006 CALD1Q05682 793 aaKnown RBP17.53■□□□□ 0.4
LINC00940-201ENST00000418006 MBIPQ9NS73 344 aa17.53■□□□□ 0.4
LINC00940-201ENST00000418006 GNAI1P63096 354 aa17.53■□□□□ 0.4
LINC00940-201ENST00000418006 VIRMAQ69YN4 1812 aaKnown RBP17.52■□□□□ 0.4
LINC00940-201ENST00000418006 TSPYL6Q8N831 410 aa17.52■□□□□ 0.4
LINC00940-201ENST00000418006 MTHFSDQ2M296 383 aaKnown RBP17.52■□□□□ 0.39
LINC00940-201ENST00000418006 FTSJ3Q8IY81 847 aaKnown RBP17.52■□□□□ 0.39
LINC00940-201ENST00000418006 RRAGDQ9NQL2 400 aaPredicted RBP17.52■□□□□ 0.39
LINC00940-201ENST00000418006 DLG5Q8TDM6 1919 aa17.52■□□□□ 0.39
LINC00940-201ENST00000418006 IFT57Q9NWB7 429 aa17.51■□□□□ 0.39
LINC00940-201ENST00000418006 C1orf167Q5SNV9 1468 aa17.51■□□□□ 0.39
LINC00940-201ENST00000418006 CT47B1P0C2W7 299 aaPredicted RBP17.51■□□□□ 0.39
LINC00940-201ENST00000418006 NOB1Q9ULX3 412 aaKnown RBP17.51■□□□□ 0.39
LINC00940-201ENST00000418006 MARF1Q9Y4F3 1742 aaKnown RBP17.5■□□□□ 0.39
LINC00940-201ENST00000418006 ARHGEF10O15013 1369 aa17.5■□□□□ 0.39
LINC00940-201ENST00000418006 ZKSCAN2Q63HK3 967 aa17.5■□□□□ 0.39
LINC00940-201ENST00000418006 CFAP44Q96MT7 982 aa17.5■□□□□ 0.39
LINC00940-201ENST00000418006 STRCP1A6NGW2 1772 aa17.49■□□□□ 0.39
LINC00940-201ENST00000418006 USP19O94966 1318 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms