RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 AEBP1Q8IUX7 1158 aa22.37■■□□□ 1.17
CALD1-204ENST00000417172 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
CALD1-204ENST00000417172 ZBTB7CA1YPR0 619 aa22.37■■□□□ 1.17
CALD1-204ENST00000417172 FCHSD2O94868 740 aa22.37■■□□□ 1.17
CALD1-204ENST00000417172 HOXC9P31274 260 aa22.37■■□□□ 1.17
CALD1-204ENST00000417172 MAPK8IP3Q9UPT6 1336 aa22.36■■□□□ 1.17
CALD1-204ENST00000417172 GOLGA2Q08379 1002 aa22.36■■□□□ 1.17
CALD1-204ENST00000417172 PHACTR3Q96KR7 559 aa22.35■■□□□ 1.17
CALD1-204ENST00000417172 USP19O94966 1318 aa22.35■■□□□ 1.17
CALD1-204ENST00000417172 TNS3Q68CZ2 1445 aa22.35■■□□□ 1.17
CALD1-204ENST00000417172 GCP02774 474 aa22.35■■□□□ 1.17
CALD1-204ENST00000417172 PHRF1Q9P1Y6 1649 aaKnown RBP22.35■■□□□ 1.17
CALD1-204ENST00000417172 TMPOP42166 694 aaKnown RBP22.34■■□□□ 1.17
CALD1-204ENST00000417172 DLG5Q8TDM6 1919 aa22.34■■□□□ 1.17
CALD1-204ENST00000417172 SULT6B1Q6IMI4 303 aa22.33■■□□□ 1.17
CALD1-204ENST00000417172 CRYBG1Q9Y4K1 1723 aa22.33■■□□□ 1.17
CALD1-204ENST00000417172 RGPD5Q99666 1765 aa22.33■■□□□ 1.16
CALD1-204ENST00000417172 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.16
CALD1-204ENST00000417172 LTV1Q96GA3 475 aaPredicted RBP22.33■■□□□ 1.16
CALD1-204ENST00000417172 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.16
CALD1-204ENST00000417172 RGPD2P0DJD1 1756 aa22.32■■□□□ 1.16
CALD1-204ENST00000417172 DUSP27Q5VZP5 1158 aa22.32■■□□□ 1.16
CALD1-204ENST00000417172 KCNH5Q8NCM2 988 aa22.32■■□□□ 1.16
CALD1-204ENST00000417172 CABLES1Q8TDN4 633 aa22.32■■□□□ 1.16
CALD1-204ENST00000417172 SLFN5Q08AF3 891 aa22.31■■□□□ 1.16
CALD1-204ENST00000417172 FKBP8Q14318 412 aa22.31■■□□□ 1.16
CALD1-204ENST00000417172 NHSL1Q5SYE7 1610 aa22.31■■□□□ 1.16
CALD1-204ENST00000417172 NGEFQ8N5V2 710 aa22.31■■□□□ 1.16
CALD1-204ENST00000417172 SPATA31A3Q5VYP0 1347 aa22.31■■□□□ 1.16
CALD1-204ENST00000417172 KIF24Q5T7B8 1368 aa22.31■■□□□ 1.16
CALD1-204ENST00000417172 RTL1A6NKG5 1358 aa22.3■■□□□ 1.16
CALD1-204ENST00000417172 PNNQ9H307 717 aaKnown RBP22.29■■□□□ 1.16
CALD1-204ENST00000417172 TRIM35Q9UPQ4 493 aa22.29■■□□□ 1.16
CALD1-204ENST00000417172 EYA1Q99502 592 aa22.29■■□□□ 1.16
CALD1-204ENST00000417172 RIPK4P57078 832 aa22.28■■□□□ 1.16
CALD1-204ENST00000417172 ZC3H6P61129 1189 aaKnown RBP22.28■■□□□ 1.16
CALD1-204ENST00000417172 CCDC27Q2M243 656 aa22.28■■□□□ 1.16
CALD1-204ENST00000417172 ARHGEF25Q86VW2 580 aa22.28■■□□□ 1.16
CALD1-204ENST00000417172 IP6K1Q92551 441 aa22.28■■□□□ 1.16
CALD1-204ENST00000417172 ARHGEF10O15013 1369 aa22.28■■□□□ 1.16
CALD1-204ENST00000417172 SOS2Q07890 1332 aaPredicted RBP22.28■■□□□ 1.16
CALD1-204ENST00000417172 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
CALD1-204ENST00000417172 TRMT2AQ8IZ69 625 aaKnown RBP22.27■■□□□ 1.16
CALD1-204ENST00000417172 IGSF1Q8N6C5 1336 aa22.26■■□□□ 1.15
CALD1-204ENST00000417172 NEFLP07196 543 aa22.25■■□□□ 1.15
CALD1-204ENST00000417172 E9PSI1 815 aa22.25■■□□□ 1.15
CALD1-204ENST00000417172 NEFMP07197 916 aa22.25■■□□□ 1.15
CALD1-204ENST00000417172 RCAN3Q9UKA8 241 aa22.25■■□□□ 1.15
CALD1-204ENST00000417172 NFE2L2Q16236 605 aa22.24■■□□□ 1.15
CALD1-204ENST00000417172 USHBP1Q8N6Y0 703 aa22.24■■□□□ 1.15
CALD1-204ENST00000417172 AXIN2Q9Y2T1 843 aa22.23■■□□□ 1.15
CALD1-204ENST00000417172 KDRP35968 1356 aa22.23■■□□□ 1.15
CALD1-204ENST00000417172 ABCA3Q99758 1704 aa22.23■■□□□ 1.15
CALD1-204ENST00000417172 WDR63Q8IWG1 891 aa22.22■■□□□ 1.15
CALD1-204ENST00000417172 NCBP3Q53F19 620 aaKnown RBP22.21■■□□□ 1.15
CALD1-204ENST00000417172 THUMPD2Q9BTF0 503 aaKnown RBP22.21■■□□□ 1.15
CALD1-204ENST00000417172 COL18A1P39060 1754 aa22.21■■□□□ 1.15
CALD1-204ENST00000417172 LRRC59Q96AG4 307 aaKnown RBP22.21■■□□□ 1.15
CALD1-204ENST00000417172 RNF123Q5XPI4 1314 aa22.2■■□□□ 1.14
CALD1-204ENST00000417172 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
CALD1-204ENST00000417172 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
CALD1-204ENST00000417172 FAM83GA6ND36 823 aa22.19■■□□□ 1.14
CALD1-204ENST00000417172 CHRNA2Q15822 529 aa22.19■■□□□ 1.14
CALD1-204ENST00000417172 ANKRD24Q8TF21 1146 aa22.18■■□□□ 1.14
CALD1-204ENST00000417172 TSR2Q969E8 191 aaKnown RBP22.18■■□□□ 1.14
CALD1-204ENST00000417172 DCTN1Q14203 1278 aa22.17■■□□□ 1.14
CALD1-204ENST00000417172 AEBP2Q6ZN18 517 aaPredicted RBP22.17■■□□□ 1.14
CALD1-204ENST00000417172 KIAA0232Q92628 1395 aa22.17■■□□□ 1.14
CALD1-204ENST00000417172 MTHFSDQ2M296 383 aaKnown RBP22.15■■□□□ 1.14
CALD1-204ENST00000417172 RRP1P56182 461 aaKnown RBP22.14■■□□□ 1.14
CALD1-204ENST00000417172 FANCIQ9NVI1 1328 aa22.14■■□□□ 1.14
CALD1-204ENST00000417172 CAMTA1Q9Y6Y1 1673 aa22.14■■□□□ 1.13
CALD1-204ENST00000417172 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
CALD1-204ENST00000417172 PLIN1O60240 522 aa22.13■■□□□ 1.13
CALD1-204ENST00000417172 ERBB3P21860 1342 aa22.12■■□□□ 1.13
CALD1-204ENST00000417172 MYH16Q9H6N6 1097 aa22.12■■□□□ 1.13
CALD1-204ENST00000417172 LAS1LQ9Y4W2 734 aaKnown RBP22.12■■□□□ 1.13
CALD1-204ENST00000417172 MCM10Q7L590 875 aa22.11■■□□□ 1.13
CALD1-204ENST00000417172 CPDO75976 1380 aa22.1■■□□□ 1.13
CALD1-204ENST00000417172 IL16Q14005 1332 aa22.1■■□□□ 1.13
CALD1-204ENST00000417172 LMO7Q8WWI1 1683 aa22.1■■□□□ 1.13
CALD1-204ENST00000417172 PHLPP1O60346 1717 aa22.1■■□□□ 1.13
CALD1-204ENST00000417172 HAP1P54257 671 aaPredicted RBP22.1■■□□□ 1.13
CALD1-204ENST00000417172 PIP4K2BP78356 416 aa22.1■■□□□ 1.13
CALD1-204ENST00000417172 NCAPD2Q15021 1401 aa22.09■■□□□ 1.13
CALD1-204ENST00000417172 FAM208AQ9UK61 1670 aaKnown RBP22.08■■□□□ 1.12
CALD1-204ENST00000417172 BCAR3O75815 825 aa22.08■■□□□ 1.12
CALD1-204ENST00000417172 LMOD3Q0VAK6 560 aa22.08■■□□□ 1.12
CALD1-204ENST00000417172 EXOSC9Q06265 439 aaKnown RBP22.07■■□□□ 1.12
CALD1-204ENST00000417172 PRDM11Q9NQV5 511 aa22.07■■□□□ 1.12
CALD1-204ENST00000417172 ABCC6O95255 1503 aa22.07■■□□□ 1.12
CALD1-204ENST00000417172 COL16A1Q07092 1604 aaPredicted RBP22.06■■□□□ 1.12
CALD1-204ENST00000417172 GAS2L2Q8NHY3 880 aa22.05■■□□□ 1.12
CALD1-204ENST00000417172 NLRP2Q9NX02 1062 aa22.04■■□□□ 1.12
CALD1-204ENST00000417172 VIRMAQ69YN4 1812 aaKnown RBP22.03■■□□□ 1.12
CALD1-204ENST00000417172 ZNF853P0CG23 659 aa22.03■■□□□ 1.12
CALD1-204ENST00000417172 CSB-PGBD3P0DP91 1061 aa22.03■■□□□ 1.12
CALD1-204ENST00000417172 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
CALD1-204ENST00000417172 MBIPQ9NS73 344 aa22.03■■□□□ 1.12
CALD1-204ENST00000417172 COL22A1Q8NFW1 1626 aaPredicted RBP22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms