RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CEBPAP49715 358 aaPredicted RBP16.06■□□□□ 0.16
LRRTM1-205ENST00000417012 ZBTB40Q9NUA8 1239 aa16.06■□□□□ 0.16
LRRTM1-205ENST00000417012 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
LRRTM1-205ENST00000417012 HMOX1P09601 288 aa16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 MRE11P49959 708 aa16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 PODXL2Q9NZ53 605 aa16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 TNRQ92752 1358 aa16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 NUDT16Q96DE0 195 aaKnown RBP16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 PANK2Q9BZ23 570 aa16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 PNPLA6Q8IY17 1366 aa16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 NUTM2FA1L443 756 aa16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 RBM25P49756 843 aaKnown RBP16.05■□□□□ 0.16
LRRTM1-205ENST00000417012 NCOA3Q9Y6Q9 1424 aa16.04■□□□□ 0.16
LRRTM1-205ENST00000417012 NUCB1Q02818 461 aa16.04■□□□□ 0.16
LRRTM1-205ENST00000417012 ATP7BP35670 1465 aa16.04■□□□□ 0.16
LRRTM1-205ENST00000417012 PNNQ9H307 717 aaKnown RBP16.04■□□□□ 0.16
LRRTM1-205ENST00000417012 PRKAR2BP31323 418 aa16.03■□□□□ 0.16
LRRTM1-205ENST00000417012 SNX21Q969T3 373 aa16.03■□□□□ 0.16
LRRTM1-205ENST00000417012 ZNF692Q9BU19 519 aaPredicted RBP16.03■□□□□ 0.16
LRRTM1-205ENST00000417012 LNPKQ9C0E8 428 aa16.03■□□□□ 0.16
LRRTM1-205ENST00000417012 ISY1Q9ULR0 285 aaKnown RBP16.03■□□□□ 0.16
LRRTM1-205ENST00000417012 HSP90AB1P08238 724 aaKnown RBP16.02■□□□□ 0.16
LRRTM1-205ENST00000417012 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.16
LRRTM1-205ENST00000417012 ALDH1L2Q3SY69 923 aa16.02■□□□□ 0.16
LRRTM1-205ENST00000417012 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.15
LRRTM1-205ENST00000417012 PHACTR3Q96KR7 559 aa16.02■□□□□ 0.15
LRRTM1-205ENST00000417012 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.15
LRRTM1-205ENST00000417012 TMEM2Q9UHN6 1383 aa16.01■□□□□ 0.15
LRRTM1-205ENST00000417012 LTKP29376 864 aa16.01■□□□□ 0.15
LRRTM1-205ENST00000417012 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
LRRTM1-205ENST00000417012 LRRC7Q96NW7 1537 aa16.01■□□□□ 0.15
LRRTM1-205ENST00000417012 HDGFP51858 240 aaKnown RBP16■□□□□ 0.15
LRRTM1-205ENST00000417012 GRPEL1Q9HAV7 217 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 CCDC61Q9Y6R9 512 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 ROBO2Q9HCK4 1378 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 UBR1Q8IWV7 1749 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 CLCN1P35523 988 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 DDIT3P35638 169 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 GBP4Q96PP9 640 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 THUMPD2Q9BTF0 503 aaKnown RBP16■□□□□ 0.15
LRRTM1-205ENST00000417012 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 FCHSD2O94868 740 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 BMP2KLQ5H9B9 411 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
LRRTM1-205ENST00000417012 CPS1P31327 1500 aa15.99■□□□□ 0.15
LRRTM1-205ENST00000417012 EDC4Q6P2E9 1401 aaKnown RBP15.99■□□□□ 0.15
LRRTM1-205ENST00000417012 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
LRRTM1-205ENST00000417012 HSP90AA1P07900 732 aaKnown RBP15.98■□□□□ 0.15
LRRTM1-205ENST00000417012 TNPO1Q92973 898 aaKnown RBP15.98■□□□□ 0.15
LRRTM1-205ENST00000417012 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
LRRTM1-205ENST00000417012 COG3Q96JB2 828 aa15.97■□□□□ 0.15
LRRTM1-205ENST00000417012 PTMSP20962 102 aa15.97■□□□□ 0.15
LRRTM1-205ENST00000417012 NAP1L5Q96NT1 182 aaPredicted RBP15.97■□□□□ 0.15
LRRTM1-205ENST00000417012 GCC1Q96CN9 775 aa15.97■□□□□ 0.15
LRRTM1-205ENST00000417012 IL13P35225 146 aa15.96■□□□□ 0.15
LRRTM1-205ENST00000417012 FAM135BQ49AJ0 1406 aa15.96■□□□□ 0.15
LRRTM1-205ENST00000417012 ADAMTS13Q76LX8 1427 aa15.96■□□□□ 0.15
LRRTM1-205ENST00000417012 ANKRD45Q5TZF3 282 aa15.96■□□□□ 0.15
LRRTM1-205ENST00000417012 RAB3GAP1Q15042 981 aa15.95■□□□□ 0.14
LRRTM1-205ENST00000417012 SKOR2Q2VWA4 1001 aaPredicted RBP15.95■□□□□ 0.14
LRRTM1-205ENST00000417012 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
LRRTM1-205ENST00000417012 KNDC1Q76NI1 1749 aa15.95■□□□□ 0.14
LRRTM1-205ENST00000417012 BRPF1P55201 1214 aaPredicted RBP15.95■□□□□ 0.14
LRRTM1-205ENST00000417012 TECPR2O15040 1411 aa15.95■□□□□ 0.14
LRRTM1-205ENST00000417012 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.94■□□□□ 0.14
LRRTM1-205ENST00000417012 SOX12O15370 315 aa15.93■□□□□ 0.14
LRRTM1-205ENST00000417012 MON2Q7Z3U7 1717 aa15.93■□□□□ 0.14
LRRTM1-205ENST00000417012 K7ELQ4 463 aaPredicted RBP15.93■□□□□ 0.14
LRRTM1-205ENST00000417012 SIRT1Q96EB6 747 aa15.93■□□□□ 0.14
LRRTM1-205ENST00000417012 ELL2O00472 640 aaPredicted RBP15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 ZBTB7BO15156 539 aaPredicted RBP15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 CALD1Q05682 793 aaKnown RBP15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 NFE2L2Q16236 605 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 TRIM44Q96DX7 344 aaPredicted RBP15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 ITSN1Q15811 1721 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 KIF2CQ99661 725 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 FAM83GA6ND36 823 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 TBC1D9Q6ZT07 1266 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 ARHGAP45Q92619 1136 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 C1orf115Q9H7X2 142 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 ACEP12821 1306 aa15.92■□□□□ 0.14
LRRTM1-205ENST00000417012 PTCH1Q13635 1447 aa15.91■□□□□ 0.14
LRRTM1-205ENST00000417012 AKAP12Q02952 1782 aa15.91■□□□□ 0.14
LRRTM1-205ENST00000417012 ESPNB1AK53 854 aa15.91■□□□□ 0.14
LRRTM1-205ENST00000417012 PIK3R4Q99570 1358 aa15.91■□□□□ 0.14
LRRTM1-205ENST00000417012 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 C3P01024 1663 aa15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 CDK12Q9NYV4 1490 aaPredicted RBP15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 GOLGA6L22H0YM25 854 aa15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 DCTN1Q14203 1278 aa15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 MRPL50Q8N5N7 158 aaKnown RBP15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 AATKQ6ZMQ8 1374 aa15.9■□□□□ 0.14
LRRTM1-205ENST00000417012 PLEKHG1Q9ULL1 1385 aa15.89■□□□□ 0.13
LRRTM1-205ENST00000417012 VAMP4O75379 141 aa15.89■□□□□ 0.13
LRRTM1-205ENST00000417012 CD2BP2O95400 341 aaKnown RBP15.89■□□□□ 0.13
LRRTM1-205ENST00000417012 AEBP1Q8IUX7 1158 aa15.89■□□□□ 0.13
LRRTM1-205ENST00000417012 AMOTL2Q9Y2J4 779 aa15.89■□□□□ 0.13
LRRTM1-205ENST00000417012 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms