RNA–Protein interactions for RNA: ENST00000416219.6

ATP2C2-202, Transcript of ATPase secretory pathway Ca2+ transporting 2, humanhuman

TSL 1 (best) BASIC

Gene ATP2C2, Length 3,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C2-202ENST00000416219 C3P01024 1663 aa16.02■□□□□ 0.16
ATP2C2-202ENST00000416219 PDE3AQ14432 1141 aa16.02■□□□□ 0.15
ATP2C2-202ENST00000416219 FER1L4A9Z1Z3 1794 aa16.02■□□□□ 0.15
ATP2C2-202ENST00000416219 CENPQQ7L2Z9 268 aaPredicted RBP16.02■□□□□ 0.15
ATP2C2-202ENST00000416219 USP6P35125 1406 aa16.01■□□□□ 0.15
ATP2C2-202ENST00000416219 ANP32AP39687 249 aaKnown RBP16■□□□□ 0.15
ATP2C2-202ENST00000416219 MBIPQ9NS73 344 aa16■□□□□ 0.15
ATP2C2-202ENST00000416219 TRIM27P14373 513 aa16■□□□□ 0.15
ATP2C2-202ENST00000416219 RTF1Q92541 710 aaKnown RBP15.99■□□□□ 0.15
ATP2C2-202ENST00000416219 C1orf115Q9H7X2 142 aa15.99■□□□□ 0.15
ATP2C2-202ENST00000416219 PCDHB15Q9Y5E8 787 aa15.99■□□□□ 0.15
ATP2C2-202ENST00000416219 SHPRHQ149N8 1683 aa15.99■□□□□ 0.15
ATP2C2-202ENST00000416219 RIMS1Q86UR5 1692 aaKnown RBP15.99■□□□□ 0.15
ATP2C2-202ENST00000416219 GNAI1P63096 354 aa15.98■□□□□ 0.15
ATP2C2-202ENST00000416219 C8orf58Q8NAV2 365 aa15.98■□□□□ 0.15
ATP2C2-202ENST00000416219 EYA1Q99502 592 aa15.98■□□□□ 0.15
ATP2C2-202ENST00000416219 COL3A1P02461 1466 aaPredicted RBP15.98■□□□□ 0.15
ATP2C2-202ENST00000416219 TWISTNBQ3B726 338 aaPredicted RBP15.97■□□□□ 0.15
ATP2C2-202ENST00000416219 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.97■□□□□ 0.15
ATP2C2-202ENST00000416219 IQSEC2Q5JU85 1478 aa15.97■□□□□ 0.15
ATP2C2-202ENST00000416219 TMEM57Q8N5G2 664 aa15.97■□□□□ 0.15
ATP2C2-202ENST00000416219 MED14O60244 1454 aa15.97■□□□□ 0.15
ATP2C2-202ENST00000416219 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
ATP2C2-202ENST00000416219 ZC3H6P61129 1189 aaKnown RBP15.96■□□□□ 0.15
ATP2C2-202ENST00000416219 ATF7IPQ6VMQ6 1270 aa15.96■□□□□ 0.15
ATP2C2-202ENST00000416219 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
ATP2C2-202ENST00000416219 ARHGAP23Q9P227 1491 aa15.96■□□□□ 0.15
ATP2C2-202ENST00000416219 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
ATP2C2-202ENST00000416219 LMOD3Q0VAK6 560 aa15.96■□□□□ 0.14
ATP2C2-202ENST00000416219 MTHFSDQ2M296 383 aaKnown RBP15.95■□□□□ 0.14
ATP2C2-202ENST00000416219 AATKQ6ZMQ8 1374 aa15.95■□□□□ 0.14
ATP2C2-202ENST00000416219 TTC21AQ8NDW8 1320 aa15.95■□□□□ 0.14
ATP2C2-202ENST00000416219 CDC42BPGQ6DT37 1551 aa15.95■□□□□ 0.14
ATP2C2-202ENST00000416219 MVPQ14764 893 aaKnown RBP15.95■□□□□ 0.14
ATP2C2-202ENST00000416219 LRRC59Q96AG4 307 aaKnown RBP15.95■□□□□ 0.14
ATP2C2-202ENST00000416219 IPO8O15397 1037 aaKnown RBP15.94■□□□□ 0.14
ATP2C2-202ENST00000416219 SLIT1O75093 1534 aa15.94■□□□□ 0.14
ATP2C2-202ENST00000416219 CABLES1Q8TDN4 633 aa15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 SETD1BQ9UPS6 1966 aaKnown RBP15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 KDM2BQ8NHM5 1336 aa15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 MAP2P11137 1827 aaKnown RBP15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 APBB1O00213 710 aa15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 VAMP4O75379 141 aa15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 ZNF428Q96B54 188 aa15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 CEP170BQ9Y4F5 1589 aaPredicted RBP15.93■□□□□ 0.14
ATP2C2-202ENST00000416219 HOXC9P31274 260 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 CFAP44Q96MT7 982 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 ATF3P18847 181 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 NBR1Q14596 966 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 BACH2Q9BYV9 841 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 IFT57Q9NWB7 429 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 TSPYL4Q9UJ04 414 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 IL16Q14005 1332 aa15.92■□□□□ 0.14
ATP2C2-202ENST00000416219 SLC4A3P48751 1232 aa15.91■□□□□ 0.14
ATP2C2-202ENST00000416219 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
ATP2C2-202ENST00000416219 RWDD1Q9H446 243 aaPredicted RBP15.9■□□□□ 0.14
ATP2C2-202ENST00000416219 NPHP4O75161 1426 aaPredicted RBP15.9■□□□□ 0.14
ATP2C2-202ENST00000416219 PTCH1Q13635 1447 aa15.9■□□□□ 0.14
ATP2C2-202ENST00000416219 FLT4P35916 1363 aa15.9■□□□□ 0.14
ATP2C2-202ENST00000416219 MS4A1P11836 297 aa15.89■□□□□ 0.13
ATP2C2-202ENST00000416219 KRT28Q7Z3Y7 464 aa15.89■□□□□ 0.13
ATP2C2-202ENST00000416219 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
ATP2C2-202ENST00000416219 KIF16BQ96L93 1317 aa15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 CT47B1P0C2W7 299 aaPredicted RBP15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 DDX19BQ9UMR2 479 aa15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 PDZRN3Q9UPQ7 1066 aa15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 OVOS2A0A0J9YW53 1432 aa15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 OVOS2Q6IE36 1432 aa15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 DIP2AQ14689 1571 aa15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 ZBTB47Q9UFB7 747 aaPredicted RBP15.88■□□□□ 0.13
ATP2C2-202ENST00000416219 KIF20BQ96Q89 1820 aa15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 GCP02774 474 aa15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 SBNO1A3KN83 1393 aa15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 SLC4A2P04920 1241 aa15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 MRPL50Q8N5N7 158 aaKnown RBP15.86■□□□□ 0.13
ATP2C2-202ENST00000416219 CSB-PGBD3P0DP91 1061 aa15.85■□□□□ 0.13
ATP2C2-202ENST00000416219 C19orf44Q9H6X5 657 aa15.85■□□□□ 0.13
ATP2C2-202ENST00000416219 HAP1P54257 671 aaPredicted RBP15.85■□□□□ 0.13
ATP2C2-202ENST00000416219 F6X3S4 739 aa15.85■□□□□ 0.13
ATP2C2-202ENST00000416219 PIK3R4Q99570 1358 aa15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 RGPD8O14715 1765 aaPredicted RBP15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 GAS2L2Q8NHY3 880 aa15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 LNPKQ9C0E8 428 aa15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 ZNF853P0CG23 659 aa15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 FAM161AQ3B820 660 aa15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 NOP58Q9Y2X3 529 aaKnown RBP15.84■□□□□ 0.13
ATP2C2-202ENST00000416219 USP31Q70CQ4 1352 aa15.83■□□□□ 0.12
ATP2C2-202ENST00000416219 MPRIPQ6WCQ1 1025 aa15.83■□□□□ 0.12
ATP2C2-202ENST00000416219 IPO9Q96P70 1041 aaKnown RBP15.83■□□□□ 0.12
ATP2C2-202ENST00000416219 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.12
ATP2C2-202ENST00000416219 DAXXQ9UER7 740 aaPredicted RBP15.83■□□□□ 0.12
ATP2C2-202ENST00000416219 GNAT3A8MTJ3 354 aa15.82■□□□□ 0.12
ATP2C2-202ENST00000416219 SSH2Q76I76 1423 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms