RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 LRRCC1Q9C099 1032 aa12.74□□□□□ -0.37
COL12A1-203ENST00000416123 GNL3LQ9NVN8 582 aaKnown RBP12.73□□□□□ -0.37
COL12A1-203ENST00000416123 CEBPAP49715 358 aaPredicted RBP12.73□□□□□ -0.37
COL12A1-203ENST00000416123 MCM10Q7L590 875 aa12.73□□□□□ -0.37
COL12A1-203ENST00000416123 THUMPD2Q9BTF0 503 aaKnown RBP12.73□□□□□ -0.37
COL12A1-203ENST00000416123 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
COL12A1-203ENST00000416123 ERC1Q8IUD2 1116 aa12.73□□□□□ -0.37
COL12A1-203ENST00000416123 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
COL12A1-203ENST00000416123 PIBF1Q8WXW3 757 aa12.73□□□□□ -0.37
COL12A1-203ENST00000416123 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
COL12A1-203ENST00000416123 SDF4Q9BRK5 362 aa12.72□□□□□ -0.37
COL12A1-203ENST00000416123 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-203ENST00000416123 AACSQ86V21 672 aa12.72□□□□□ -0.37
COL12A1-203ENST00000416123 CT47A1Q5JQC4 288 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-203ENST00000416123 ZFYVE27Q5T4F4 411 aa12.72□□□□□ -0.37
COL12A1-203ENST00000416123 RNF214Q8ND24 703 aa12.72□□□□□ -0.37
COL12A1-203ENST00000416123 TNNT3P45378 269 aaPredicted RBP12.72□□□□□ -0.37
COL12A1-203ENST00000416123 CCT4P50991 539 aaKnown RBP12.72□□□□□ -0.37
COL12A1-203ENST00000416123 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.72□□□□□ -0.37
COL12A1-203ENST00000416123 GNAT3A8MTJ3 354 aa12.71□□□□□ -0.37
COL12A1-203ENST00000416123 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
COL12A1-203ENST00000416123 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
COL12A1-203ENST00000416123 CDK5RAP3Q96JB5 506 aa12.71□□□□□ -0.37
COL12A1-203ENST00000416123 PRXQ9BXM0 1461 aa12.71□□□□□ -0.37
COL12A1-203ENST00000416123 BRPF1P55201 1214 aaPredicted RBP12.71□□□□□ -0.37
COL12A1-203ENST00000416123 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
COL12A1-203ENST00000416123 ODF2Q5BJF6 829 aa12.71□□□□□ -0.38
COL12A1-203ENST00000416123 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 SRGAP3O43295 1099 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 ZSCAN29Q8IWY8 852 aaPredicted RBP12.7□□□□□ -0.38
COL12A1-203ENST00000416123 FMNL2Q96PY5 1086 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 R3HCC1Q9Y3T6 440 aaKnown RBP12.7□□□□□ -0.38
COL12A1-203ENST00000416123 FBXO31Q5XUX0 539 aaPredicted RBP12.7□□□□□ -0.38
COL12A1-203ENST00000416123 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 SRCIN1Q9C0H9 1055 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 IL1RAPL2Q9NP60 686 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 HIP1O00291 1037 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 CWC27Q6UX04 472 aaKnown RBP12.7□□□□□ -0.38
COL12A1-203ENST00000416123 ADGRL1O94910 1474 aa12.7□□□□□ -0.38
COL12A1-203ENST00000416123 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
COL12A1-203ENST00000416123 MPRIPQ6WCQ1 1025 aa12.69□□□□□ -0.38
COL12A1-203ENST00000416123 CCDC69A6NI79 296 aa12.69□□□□□ -0.38
COL12A1-203ENST00000416123 ATF7IPQ6VMQ6 1270 aa12.68□□□□□ -0.38
COL12A1-203ENST00000416123 PNISRQ8TF01 805 aaKnown RBP12.68□□□□□ -0.38
COL12A1-203ENST00000416123 GCC1Q96CN9 775 aa12.68□□□□□ -0.38
COL12A1-203ENST00000416123 FIBPO43427 364 aa12.68□□□□□ -0.38
COL12A1-203ENST00000416123 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
COL12A1-203ENST00000416123 PRPF40AO75400 957 aaKnown RBP12.67□□□□□ -0.38
COL12A1-203ENST00000416123 FOXO3O43524 673 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 TMPOP42166 694 aaKnown RBP12.67□□□□□ -0.38
COL12A1-203ENST00000416123 KRT18P05783 430 aaKnown RBP12.67□□□□□ -0.38
COL12A1-203ENST00000416123 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL12A1-203ENST00000416123 SMC2O95347 1197 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 KIAA0586Q9BVV6 1533 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 TDO2P48775 406 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 NAT10Q9H0A0 1025 aaKnown RBP12.67□□□□□ -0.38
COL12A1-203ENST00000416123 ATAD2Q6PL18 1390 aa12.67□□□□□ -0.38
COL12A1-203ENST00000416123 OFD1O75665 1012 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 NFKBIBQ15653 356 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 NME9Q86XW9 330 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 LRP2BPQ9P2M1 347 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 MPHOSPH10O00566 681 aaKnown RBP12.66□□□□□ -0.38
COL12A1-203ENST00000416123 CTTNBP2Q8WZ74 1663 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 MVPQ14764 893 aaKnown RBP12.66□□□□□ -0.38
COL12A1-203ENST00000416123 RAI14Q9P0K7 980 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 ABCF2Q9UG63 623 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
COL12A1-203ENST00000416123 STARD3NLO95772 234 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 CYP46A1Q9Y6A2 500 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 AAMPQ13685 434 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 KINO60870 393 aaKnown RBP12.65□□□□□ -0.38
COL12A1-203ENST00000416123 RPGRIP1LQ68CZ1 1315 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 ANKRD30BQ9BXX2 1392 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 IDH1O75874 414 aaKnown RBP12.65□□□□□ -0.38
COL12A1-203ENST00000416123 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 SMARCA5O60264 1052 aaPredicted RBP12.65□□□□□ -0.38
COL12A1-203ENST00000416123 HSP90AB2PQ58FF8 381 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 TMEM57Q8N5G2 664 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 DUSP27Q5VZP5 1158 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 SKIDA1Q1XH10 827 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 MYD88Q99836 296 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
COL12A1-203ENST00000416123 ZPR1O75312 459 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 IBSPP21815 317 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-203ENST00000416123 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-203ENST00000416123 AMOTL2Q9Y2J4 779 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 SPC24Q8NBT2 197 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 EXOC6BQ9Y2D4 811 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 FANCIQ9NVI1 1328 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 PDE3AQ14432 1141 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 TXLNAP40222 546 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-203ENST00000416123 HSP90AA2PQ14568 343 aaPredicted RBP12.64□□□□□ -0.39
COL12A1-203ENST00000416123 BICRAQ9NZM4 1560 aa12.64□□□□□ -0.39
COL12A1-203ENST00000416123 IGHMBP2P38935 993 aaKnown RBP12.64□□□□□ -0.39
COL12A1-203ENST00000416123 GRIN2AQ12879 1464 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms