RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 RSPH6AQ9H0K4 717 aa9.66□□□□□ -0.86
CSTF1-202ENST00000415828 POLR3EQ9NVU0 708 aa9.66□□□□□ -0.86
CSTF1-202ENST00000415828 J3QL48 77 aa9.65□□□□□ -0.86
CSTF1-202ENST00000415828 AVPP01185 164 aa9.65□□□□□ -0.86
CSTF1-202ENST00000415828 SMPD1P17405 629 aa9.65□□□□□ -0.86
CSTF1-202ENST00000415828 KCNH2Q12809 1159 aa9.65□□□□□ -0.86
CSTF1-202ENST00000415828 PRPF38BQ5VTL8 546 aaKnown RBP9.65□□□□□ -0.86
CSTF1-202ENST00000415828 UNC93B1Q9H1C4 597 aa9.65□□□□□ -0.86
CSTF1-202ENST00000415828 CUX1P39880 1505 aa9.65□□□□□ -0.86
CSTF1-202ENST00000415828 POTECB2RU33 542 aa9.64□□□□□ -0.87
CSTF1-202ENST00000415828 QPCTQ16769 361 aa9.64□□□□□ -0.87
CSTF1-202ENST00000415828 TEX14Q8IWB6 1497 aa9.64□□□□□ -0.87
CSTF1-202ENST00000415828 RUSC2Q8N2Y8 1516 aa9.63□□□□□ -0.87
CSTF1-202ENST00000415828 ABCC2Q92887 1545 aa9.63□□□□□ -0.87
CSTF1-202ENST00000415828 NUTM2BA6NNL0 878 aaPredicted RBP9.63□□□□□ -0.87
CSTF1-202ENST00000415828 NUTM2EB1AL46 878 aaPredicted RBP9.63□□□□□ -0.87
CSTF1-202ENST00000415828 SH3BP2P78314 561 aa9.63□□□□□ -0.87
CSTF1-202ENST00000415828 LINC01559Q495D7 138 aa9.63□□□□□ -0.87
CSTF1-202ENST00000415828 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
CSTF1-202ENST00000415828 LYPD8Q6UX82 237 aa9.63□□□□□ -0.87
CSTF1-202ENST00000415828 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
CSTF1-202ENST00000415828 TSC1Q92574 1164 aa9.63□□□□□ -0.87
CSTF1-202ENST00000415828 LTBP4Q8N2S1 1624 aa9.63□□□□□ -0.87
CSTF1-202ENST00000415828 CTHP32929 405 aa9.62□□□□□ -0.87
CSTF1-202ENST00000415828 CRIPAKQ8N1N5 446 aa9.62□□□□□ -0.87
CSTF1-202ENST00000415828 EHBP1Q8NDI1 1231 aa9.62□□□□□ -0.87
CSTF1-202ENST00000415828 BAP1Q92560 729 aa9.62□□□□□ -0.87
CSTF1-202ENST00000415828 DACH1Q9UI36 760 aa9.62□□□□□ -0.87
CSTF1-202ENST00000415828 AXIN1O15169 862 aa9.61□□□□□ -0.87
CSTF1-202ENST00000415828 CLK2P49760 499 aaKnown RBP9.61□□□□□ -0.87
CSTF1-202ENST00000415828 EPRSP07814 1512 aaKnown RBP9.61□□□□□ -0.87
CSTF1-202ENST00000415828 PER1O15534 1290 aaPredicted RBP9.6□□□□□ -0.87
CSTF1-202ENST00000415828 LILRB3O75022 631 aa9.6□□□□□ -0.87
CSTF1-202ENST00000415828 ALDH1A1P00352 501 aa9.6□□□□□ -0.87
CSTF1-202ENST00000415828 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
CSTF1-202ENST00000415828 TUSC1Q2TAM9 212 aa9.6□□□□□ -0.87
CSTF1-202ENST00000415828 SH3D19Q5HYK7 790 aa9.6□□□□□ -0.87
CSTF1-202ENST00000415828 MAP10Q9P2G4 905 aa9.6□□□□□ -0.87
CSTF1-202ENST00000415828 PLB1Q6P1J6 1458 aa9.59□□□□□ -0.87
CSTF1-202ENST00000415828 SETD1AO15047 1707 aaKnown RBP9.59□□□□□ -0.87
CSTF1-202ENST00000415828 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
CSTF1-202ENST00000415828 HPS1Q92902 700 aa9.59□□□□□ -0.87
CSTF1-202ENST00000415828 KIAA0586Q9BVV6 1533 aa9.58□□□□□ -0.88
CSTF1-202ENST00000415828 SIAH2O43255 324 aa9.58□□□□□ -0.88
CSTF1-202ENST00000415828 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
CSTF1-202ENST00000415828 ZNF511Q8NB15 262 aa9.58□□□□□ -0.88
CSTF1-202ENST00000415828 PROCA1Q8NCQ7 364 aaPredicted RBP9.58□□□□□ -0.88
CSTF1-202ENST00000415828 F12P00748 615 aaPredicted RBP9.57□□□□□ -0.88
CSTF1-202ENST00000415828 SMCPP49901 116 aaPredicted RBP9.57□□□□□ -0.88
CSTF1-202ENST00000415828 PREX1Q8TCU6 1659 aa9.57□□□□□ -0.88
CSTF1-202ENST00000415828 PCMTD1Q96MG8 357 aaPredicted RBP9.56□□□□□ -0.88
CSTF1-202ENST00000415828 ABCA10Q8WWZ4 1543 aa9.56□□□□□ -0.88
CSTF1-202ENST00000415828 CFAP43Q8NDM7 1665 aa9.55□□□□□ -0.88
CSTF1-202ENST00000415828 ZNF775Q96BV0 537 aaPredicted RBP9.55□□□□□ -0.88
CSTF1-202ENST00000415828 IQSEC2Q5JU85 1478 aa9.54□□□□□ -0.88
CSTF1-202ENST00000415828 GMPR2Q9P2T1 348 aaKnown RBP9.54□□□□□ -0.88
CSTF1-202ENST00000415828 SIGLEC1Q9BZZ2 1709 aa9.53□□□□□ -0.88
CSTF1-202ENST00000415828 VARSP26640 1264 aaKnown RBP9.53□□□□□ -0.88
CSTF1-202ENST00000415828 HELBQ8NG08 1087 aaPredicted RBP9.53□□□□□ -0.88
CSTF1-202ENST00000415828 TLL2Q9Y6L7 1015 aa9.53□□□□□ -0.88
CSTF1-202ENST00000415828 WASF2Q9Y6W5 498 aa9.53□□□□□ -0.88
CSTF1-202ENST00000415828 ZCCHC11Q5TAX3 1644 aaKnown RBP9.53□□□□□ -0.88
CSTF1-202ENST00000415828 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.89
CSTF1-202ENST00000415828 FOXJ1Q92949 421 aa9.52□□□□□ -0.89
CSTF1-202ENST00000415828 FER1L4A9Z1Z3 1794 aa9.52□□□□□ -0.89
CSTF1-202ENST00000415828 TTBK1Q5TCY1 1321 aaPredicted RBP9.52□□□□□ -0.89
CSTF1-202ENST00000415828 YEATS2Q9ULM3 1422 aa9.51□□□□□ -0.89
CSTF1-202ENST00000415828 GOPCQ9HD26 462 aa9.51□□□□□ -0.89
CSTF1-202ENST00000415828 ATP13A2Q9NQ11 1180 aa9.51□□□□□ -0.89
CSTF1-202ENST00000415828 C11orf95C9JLR9 678 aaPredicted RBP9.5□□□□□ -0.89
CSTF1-202ENST00000415828 HSPA1LP34931 641 aa9.5□□□□□ -0.89
CSTF1-202ENST00000415828 FBXO31Q5XUX0 539 aaPredicted RBP9.5□□□□□ -0.89
CSTF1-202ENST00000415828 UBAP1LF5GYI3 381 aa9.49□□□□□ -0.89
CSTF1-202ENST00000415828 CTDSPL2Q05D32 466 aa9.49□□□□□ -0.89
CSTF1-202ENST00000415828 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.49□□□□□ -0.89
CSTF1-202ENST00000415828 AGERQ15109 404 aa9.48□□□□□ -0.89
CSTF1-202ENST00000415828 C4orf48Q5BLP8 95 aa9.47□□□□□ -0.89
CSTF1-202ENST00000415828 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
CSTF1-202ENST00000415828 RGS17Q9UGC6 210 aaPredicted RBP9.47□□□□□ -0.89
CSTF1-202ENST00000415828 MPNDQ8N594 471 aa9.46□□□□□ -0.9
CSTF1-202ENST00000415828 MAGI3Q5TCQ9 1506 aa9.46□□□□□ -0.9
CSTF1-202ENST00000415828 CAPN5O15484 640 aaPredicted RBP9.45□□□□□ -0.9
CSTF1-202ENST00000415828 NNTQ13423 1086 aa9.45□□□□□ -0.9
CSTF1-202ENST00000415828 ARID5BQ14865 1188 aa9.45□□□□□ -0.9
CSTF1-202ENST00000415828 BPHLQ86WA6 291 aaPredicted RBP9.45□□□□□ -0.9
CSTF1-202ENST00000415828 ARMC2Q8NEN0 867 aa9.45□□□□□ -0.9
CSTF1-202ENST00000415828 LRRN4Q8WUT4 740 aa9.45□□□□□ -0.9
CSTF1-202ENST00000415828 ARID4BQ4LE39 1312 aaPredicted RBP9.45□□□□□ -0.9
CSTF1-202ENST00000415828 AP1G2O75843 785 aa9.44□□□□□ -0.9
CSTF1-202ENST00000415828 SNRPBP14678 240 aaKnown RBP9.44□□□□□ -0.9
CSTF1-202ENST00000415828 PTPRGP23470 1445 aa9.44□□□□□ -0.9
CSTF1-202ENST00000415828 FRMPD1Q5SYB0 1578 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 TTC37Q6PGP7 1564 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 ARAP3Q8WWN8 1544 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 PTPRTO14522 1441 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 BMP1P13497 986 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 RFC5P40937 340 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 NBPF14Q5TI25 921 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
CSTF1-202ENST00000415828 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms