RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 VAMP4O75379 141 aa16.8■□□□□ 0.28
CSTF2-203ENST00000415585 MFAP1P55081 439 aaKnown RBP16.8■□□□□ 0.28
CSTF2-203ENST00000415585 CALD1Q05682 793 aaKnown RBP16.8■□□□□ 0.28
CSTF2-203ENST00000415585 AATKQ6ZMQ8 1374 aa16.8■□□□□ 0.28
CSTF2-203ENST00000415585 C3P01024 1663 aa16.8■□□□□ 0.28
CSTF2-203ENST00000415585 AKAP12Q02952 1782 aa16.79■□□□□ 0.28
CSTF2-203ENST00000415585 NUCB1Q02818 461 aa16.79■□□□□ 0.28
CSTF2-203ENST00000415585 ZRANB1Q9UGI0 708 aa16.79■□□□□ 0.28
CSTF2-203ENST00000415585 MRPL50Q8N5N7 158 aaKnown RBP16.79■□□□□ 0.28
CSTF2-203ENST00000415585 IFT57Q9NWB7 429 aa16.79■□□□□ 0.28
CSTF2-203ENST00000415585 PTCH1Q13635 1447 aa16.78■□□□□ 0.28
CSTF2-203ENST00000415585 CPS1P31327 1500 aa16.78■□□□□ 0.28
CSTF2-203ENST00000415585 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
CSTF2-203ENST00000415585 FER1L4A9Z1Z3 1794 aa16.78■□□□□ 0.28
CSTF2-203ENST00000415585 GNAI1P63096 354 aa16.78■□□□□ 0.28
CSTF2-203ENST00000415585 ZNF853P0CG23 659 aa16.77■□□□□ 0.28
CSTF2-203ENST00000415585 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
CSTF2-203ENST00000415585 TSPYL6Q8N831 410 aa16.77■□□□□ 0.28
CSTF2-203ENST00000415585 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.77■□□□□ 0.28
CSTF2-203ENST00000415585 NUDT16Q96DE0 195 aaKnown RBP16.77■□□□□ 0.28
CSTF2-203ENST00000415585 BRPF3Q9ULD4 1205 aa16.77■□□□□ 0.28
CSTF2-203ENST00000415585 PIK3R4Q99570 1358 aa16.77■□□□□ 0.28
CSTF2-203ENST00000415585 ZBTB7BO15156 539 aaPredicted RBP16.77■□□□□ 0.27
CSTF2-203ENST00000415585 ARHGAP45Q92619 1136 aa16.77■□□□□ 0.27
CSTF2-203ENST00000415585 UBR1Q8IWV7 1749 aa16.76■□□□□ 0.27
CSTF2-203ENST00000415585 MBIPQ9NS73 344 aa16.76■□□□□ 0.27
CSTF2-203ENST00000415585 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
CSTF2-203ENST00000415585 CHD1LQ86WJ1 897 aa16.76■□□□□ 0.27
CSTF2-203ENST00000415585 COG3Q96JB2 828 aa16.76■□□□□ 0.27
CSTF2-203ENST00000415585 LNPKQ9C0E8 428 aa16.76■□□□□ 0.27
CSTF2-203ENST00000415585 TECPR2O15040 1411 aa16.75■□□□□ 0.27
CSTF2-203ENST00000415585 TMEM2Q9UHN6 1383 aa16.75■□□□□ 0.27
CSTF2-203ENST00000415585 LTKP29376 864 aa16.75■□□□□ 0.27
CSTF2-203ENST00000415585 CCDC61Q9Y6R9 512 aa16.75■□□□□ 0.27
CSTF2-203ENST00000415585 RRS1Q15050 365 aaKnown RBP16.74■□□□□ 0.27
CSTF2-203ENST00000415585 CHMP4BQ9H444 224 aaKnown RBP16.74■□□□□ 0.27
CSTF2-203ENST00000415585 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
CSTF2-203ENST00000415585 ABCC4O15439 1325 aa16.73■□□□□ 0.27
CSTF2-203ENST00000415585 ELL2O00472 640 aaPredicted RBP16.73■□□□□ 0.27
CSTF2-203ENST00000415585 LMOD3Q0VAK6 560 aa16.73■□□□□ 0.27
CSTF2-203ENST00000415585 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
CSTF2-203ENST00000415585 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
CSTF2-203ENST00000415585 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
CSTF2-203ENST00000415585 SPRYD3Q8NCJ5 442 aa16.73■□□□□ 0.27
CSTF2-203ENST00000415585 GCC1Q96CN9 775 aa16.72■□□□□ 0.27
CSTF2-203ENST00000415585 C1orf115Q9H7X2 142 aa16.72■□□□□ 0.27
CSTF2-203ENST00000415585 NRKQ7Z2Y5 1582 aa16.72■□□□□ 0.27
CSTF2-203ENST00000415585 C8orf58Q8NAV2 365 aa16.71■□□□□ 0.27
CSTF2-203ENST00000415585 PRR36Q9H6K5 1346 aa16.7■□□□□ 0.26
CSTF2-203ENST00000415585 FAM83GA6ND36 823 aa16.7■□□□□ 0.26
CSTF2-203ENST00000415585 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
CSTF2-203ENST00000415585 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
CSTF2-203ENST00000415585 RBM25P49756 843 aaKnown RBP16.69■□□□□ 0.26
CSTF2-203ENST00000415585 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
CSTF2-203ENST00000415585 HDGFP51858 240 aaKnown RBP16.69■□□□□ 0.26
CSTF2-203ENST00000415585 SIRT2Q8IXJ6 389 aa16.69■□□□□ 0.26
CSTF2-203ENST00000415585 RIMS1Q86UR5 1692 aaKnown RBP16.68■□□□□ 0.26
CSTF2-203ENST00000415585 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
CSTF2-203ENST00000415585 HSCBQ8IWL3 235 aa16.68■□□□□ 0.26
CSTF2-203ENST00000415585 API5Q9BZZ5 524 aaKnown RBP16.68■□□□□ 0.26
CSTF2-203ENST00000415585 CHMP5Q9NZZ3 219 aa16.68■□□□□ 0.26
CSTF2-203ENST00000415585 ROBO2Q9HCK4 1378 aa16.67■□□□□ 0.26
CSTF2-203ENST00000415585 TOPAZ1Q8N9V7 1692 aa16.66■□□□□ 0.26
CSTF2-203ENST00000415585 ADAMTS13Q76LX8 1427 aa16.66■□□□□ 0.26
CSTF2-203ENST00000415585 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.66■□□□□ 0.26
CSTF2-203ENST00000415585 NCOA3Q9Y6Q9 1424 aa16.65■□□□□ 0.26
CSTF2-203ENST00000415585 MCM4P33991 863 aa16.65■□□□□ 0.26
CSTF2-203ENST00000415585 EIF4A2Q14240 407 aaKnown RBP16.65■□□□□ 0.26
CSTF2-203ENST00000415585 AEBP1Q8IUX7 1158 aa16.65■□□□□ 0.26
CSTF2-203ENST00000415585 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
CSTF2-203ENST00000415585 SNX21Q969T3 373 aa16.65■□□□□ 0.26
CSTF2-203ENST00000415585 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
CSTF2-203ENST00000415585 KIF24Q5T7B8 1368 aa16.64■□□□□ 0.25
CSTF2-203ENST00000415585 NALCNQ8IZF0 1738 aa16.64■□□□□ 0.25
CSTF2-203ENST00000415585 TTC21BQ7Z4L5 1316 aa16.64■□□□□ 0.25
CSTF2-203ENST00000415585 ARHGAP23Q9P227 1491 aa16.64■□□□□ 0.25
CSTF2-203ENST00000415585 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
CSTF2-203ENST00000415585 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
CSTF2-203ENST00000415585 PEAK1Q9H792 1746 aa16.63■□□□□ 0.25
CSTF2-203ENST00000415585 OVOS2A0A0J9YW53 1432 aa16.63■□□□□ 0.25
CSTF2-203ENST00000415585 OVOS2Q6IE36 1432 aa16.63■□□□□ 0.25
CSTF2-203ENST00000415585 SLIT1O75093 1534 aa16.62■□□□□ 0.25
CSTF2-203ENST00000415585 RGPD1P0DJD0 1748 aa16.62■□□□□ 0.25
CSTF2-203ENST00000415585 TBC1D9Q6ZT07 1266 aa16.62■□□□□ 0.25
CSTF2-203ENST00000415585 THEMISQ8N1K5 641 aaPredicted RBP16.62■□□□□ 0.25
CSTF2-203ENST00000415585 ACEP12821 1306 aa16.61■□□□□ 0.25
CSTF2-203ENST00000415585 DDIT3P35638 169 aa16.61■□□□□ 0.25
CSTF2-203ENST00000415585 KIF2CQ99661 725 aa16.61■□□□□ 0.25
CSTF2-203ENST00000415585 EID1Q9Y6B2 187 aa16.61■□□□□ 0.25
CSTF2-203ENST00000415585 RGS12O14924 1447 aa16.6■□□□□ 0.25
CSTF2-203ENST00000415585 INTS3Q68E01 1043 aaKnown RBP16.6■□□□□ 0.25
CSTF2-203ENST00000415585 USP6P35125 1406 aa16.6■□□□□ 0.25
CSTF2-203ENST00000415585 PLEKHG3A1L390 1219 aa16.6■□□□□ 0.25
CSTF2-203ENST00000415585 CHL1O00533 1208 aa16.6■□□□□ 0.25
CSTF2-203ENST00000415585 KRT24Q2M2I5 525 aa16.6■□□□□ 0.25
CSTF2-203ENST00000415585 L1TD1Q5T7N2 865 aaKnown RBP16.59■□□□□ 0.25
CSTF2-203ENST00000415585 DCTPP1Q9H773 170 aa16.59■□□□□ 0.25
CSTF2-203ENST00000415585 PTPRUQ92729 1446 aa16.59■□□□□ 0.25
CSTF2-203ENST00000415585 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.25
CSTF2-203ENST00000415585 HSP90AB2PQ58FF8 381 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms