RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
RFFL-205ENST00000415395 MAP3K19Q56UN5 1328 aa15.06■□□□□ 0
RFFL-205ENST00000415395 MAPK8IP3Q9UPT6 1336 aa15.06■□□□□ 0
RFFL-205ENST00000415395 FOXO3O43524 673 aa15.06■□□□□ 0
RFFL-205ENST00000415395 RRP1P56182 461 aaKnown RBP15.06■□□□□ 0
RFFL-205ENST00000415395 KCNH5Q8NCM2 988 aa15.06■□□□□ 0
RFFL-205ENST00000415395 NPHP3Q7Z494 1330 aa15.06■□□□□ 0
RFFL-205ENST00000415395 SENP3-EIF4A1A0A087X0R7 540 aa15.06■□□□□ 0
RFFL-205ENST00000415395 NEFMP07197 916 aa15.05■□□□□ -0
RFFL-205ENST00000415395 KRT28Q7Z3Y7 464 aa15.05■□□□□ -0
RFFL-205ENST00000415395 RSPH6AQ9H0K4 717 aa15.05■□□□□ -0
RFFL-205ENST00000415395 E9PSI1 815 aa15.04■□□□□ -0
RFFL-205ENST00000415395 TCERG1O14776 1098 aaKnown RBP15.04■□□□□ -0
RFFL-205ENST00000415395 WDR63Q8IWG1 891 aa15.04■□□□□ -0
RFFL-205ENST00000415395 WWC1Q8IX03 1113 aa15.04■□□□□ -0
RFFL-205ENST00000415395 IPO9Q96P70 1041 aaKnown RBP15.04■□□□□ -0
RFFL-205ENST00000415395 RCAN3Q9UKA8 241 aa15.04■□□□□ -0
RFFL-205ENST00000415395 USP19O94966 1318 aa15.04■□□□□ -0
RFFL-205ENST00000415395 SLFN5Q08AF3 891 aa15.03■□□□□ -0
RFFL-205ENST00000415395 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
RFFL-205ENST00000415395 TRMT2AQ8IZ69 625 aaKnown RBP15.03■□□□□ -0
RFFL-205ENST00000415395 CDCA7LQ96GN5 454 aa15.03■□□□□ -0
RFFL-205ENST00000415395 ARHGEF10O15013 1369 aa15.03■□□□□ -0
RFFL-205ENST00000415395 PXDNQ92626 1479 aa15.03■□□□□ -0
RFFL-205ENST00000415395 TMPOP42166 694 aaKnown RBP15.02□□□□□ -0.01
RFFL-205ENST00000415395 AMPHP49418 695 aa15.02□□□□□ -0.01
RFFL-205ENST00000415395 DUSP27Q5VZP5 1158 aa15.02□□□□□ -0.01
RFFL-205ENST00000415395 ZBTB47Q9UFB7 747 aaPredicted RBP15.02□□□□□ -0.01
RFFL-205ENST00000415395 MS4A1P11836 297 aa15.01□□□□□ -0.01
RFFL-205ENST00000415395 MED1Q15648 1581 aaPredicted RBP15.01□□□□□ -0.01
RFFL-205ENST00000415395 TNS3Q68CZ2 1445 aa15.01□□□□□ -0.01
RFFL-205ENST00000415395 PRKAR2BP31323 418 aa15□□□□□ -0.01
RFFL-205ENST00000415395 HSP90AB2PQ58FF8 381 aa15□□□□□ -0.01
RFFL-205ENST00000415395 NUTM2GQ5VZR2 741 aa15□□□□□ -0.01
RFFL-205ENST00000415395 SOX12O15370 315 aa15□□□□□ -0.01
RFFL-205ENST00000415395 HOXC9P31274 260 aa15□□□□□ -0.01
RFFL-205ENST00000415395 CRYBG1Q9Y4K1 1723 aa14.99□□□□□ -0.01
RFFL-205ENST00000415395 RTL5Q5HYW3 569 aaPredicted RBP14.99□□□□□ -0.01
RFFL-205ENST00000415395 KDRP35968 1356 aa14.99□□□□□ -0.01
RFFL-205ENST00000415395 IL16Q14005 1332 aa14.99□□□□□ -0.01
RFFL-205ENST00000415395 ABCC6O95255 1503 aa14.99□□□□□ -0.01
RFFL-205ENST00000415395 NHSL1Q5SYE7 1610 aa14.99□□□□□ -0.01
RFFL-205ENST00000415395 DLG5Q8TDM6 1919 aa14.99□□□□□ -0.01
RFFL-205ENST00000415395 BRINP3Q76B58 766 aa14.98□□□□□ -0.01
RFFL-205ENST00000415395 IP6K1Q92551 441 aa14.98□□□□□ -0.01
RFFL-205ENST00000415395 SLAIN2Q9P270 581 aa14.98□□□□□ -0.01
RFFL-205ENST00000415395 RRP7AQ9Y3A4 280 aaKnown RBP14.98□□□□□ -0.01
RFFL-205ENST00000415395 IGSF1Q8N6C5 1336 aa14.98□□□□□ -0.01
RFFL-205ENST00000415395 HMOX1P09601 288 aa14.97□□□□□ -0.01
RFFL-205ENST00000415395 XPCQ01831 940 aaPredicted RBP14.97□□□□□ -0.01
RFFL-205ENST00000415395 NEUROD2Q15784 382 aa14.97□□□□□ -0.01
RFFL-205ENST00000415395 NFE2L2Q16236 605 aa14.97□□□□□ -0.01
RFFL-205ENST00000415395 LTBP4Q8N2S1 1624 aa14.97□□□□□ -0.01
RFFL-205ENST00000415395 GCP02774 474 aa14.97□□□□□ -0.01
RFFL-205ENST00000415395 RIPK4P57078 832 aa14.96□□□□□ -0.01
RFFL-205ENST00000415395 LMOD3Q0VAK6 560 aa14.96□□□□□ -0.01
RFFL-205ENST00000415395 SPATA31A3Q5VYP0 1347 aa14.96□□□□□ -0.02
RFFL-205ENST00000415395 SULT6B1Q6IMI4 303 aa14.95□□□□□ -0.02
RFFL-205ENST00000415395 ARHGEF25Q86VW2 580 aa14.95□□□□□ -0.02
RFFL-205ENST00000415395 MYH16Q9H6N6 1097 aa14.95□□□□□ -0.02
RFFL-205ENST00000415395 TRIM35Q9UPQ4 493 aa14.95□□□□□ -0.02
RFFL-205ENST00000415395 CALD1Q05682 793 aaKnown RBP14.95□□□□□ -0.02
RFFL-205ENST00000415395 SOS2Q07890 1332 aaPredicted RBP14.94□□□□□ -0.02
RFFL-205ENST00000415395 LMOD2Q6P5Q4 547 aa14.94□□□□□ -0.02
RFFL-205ENST00000415395 SPINK5Q9NQ38 1064 aaPredicted RBP14.94□□□□□ -0.02
RFFL-205ENST00000415395 CAMTA1Q9Y6Y1 1673 aa14.94□□□□□ -0.02
RFFL-205ENST00000415395 DEKP35659 375 aaKnown RBP14.93□□□□□ -0.02
RFFL-205ENST00000415395 PHACTR3Q96KR7 559 aa14.93□□□□□ -0.02
RFFL-205ENST00000415395 EXOC6Q8TAG9 804 aa14.92□□□□□ -0.02
RFFL-205ENST00000415395 EYA1Q99502 592 aa14.92□□□□□ -0.02
RFFL-205ENST00000415395 FAM208AQ9UK61 1670 aaKnown RBP14.92□□□□□ -0.02
RFFL-205ENST00000415395 COL18A1P39060 1754 aa14.91□□□□□ -0.02
RFFL-205ENST00000415395 CT47B1P0C2W7 299 aaPredicted RBP14.91□□□□□ -0.02
RFFL-205ENST00000415395 AEBP1Q8IUX7 1158 aa14.91□□□□□ -0.02
RFFL-205ENST00000415395 NCAPD2Q15021 1401 aa14.91□□□□□ -0.02
RFFL-205ENST00000415395 DDX17Q92841 729 aaKnown RBP14.9□□□□□ -0.02
RFFL-205ENST00000415395 DDRGK1Q96HY6 314 aa14.9□□□□□ -0.02
RFFL-205ENST00000415395 CPDO75976 1380 aa14.9□□□□□ -0.02
RFFL-205ENST00000415395 ABCA3Q99758 1704 aa14.9□□□□□ -0.02
RFFL-205ENST00000415395 AHDC1Q5TGY3 1603 aaPredicted RBP14.89□□□□□ -0.03
RFFL-205ENST00000415395 RGPD5Q99666 1765 aa14.89□□□□□ -0.03
RFFL-205ENST00000415395 RGPD2P0DJD1 1756 aa14.89□□□□□ -0.03
RFFL-205ENST00000415395 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.89□□□□□ -0.03
RFFL-205ENST00000415395 LMO7Q8WWI1 1683 aa14.88□□□□□ -0.03
RFFL-205ENST00000415395 ROBO1Q9Y6N7 1651 aa14.88□□□□□ -0.03
RFFL-205ENST00000415395 GAS2L2Q8NHY3 880 aa14.88□□□□□ -0.03
RFFL-205ENST00000415395 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
RFFL-205ENST00000415395 PDE4AP27815 886 aa14.87□□□□□ -0.03
RFFL-205ENST00000415395 NBR1Q14596 966 aa14.86□□□□□ -0.03
RFFL-205ENST00000415395 IFT57Q9NWB7 429 aa14.86□□□□□ -0.03
RFFL-205ENST00000415395 PLEKHG2Q9H7P9 1386 aa14.86□□□□□ -0.03
RFFL-205ENST00000415395 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
RFFL-205ENST00000415395 GNAI1P63096 354 aa14.86□□□□□ -0.03
RFFL-205ENST00000415395 BACH2Q9BYV9 841 aa14.86□□□□□ -0.03
RFFL-205ENST00000415395 LTV1Q96GA3 475 aaPredicted RBP14.85□□□□□ -0.03
RFFL-205ENST00000415395 LRRC37A3O60309 1634 aa14.85□□□□□ -0.03
RFFL-205ENST00000415395 ZNF853P0CG23 659 aa14.84□□□□□ -0.03
RFFL-205ENST00000415395 ANKRD24Q8TF21 1146 aa14.84□□□□□ -0.03
RFFL-205ENST00000415395 ERBB3P21860 1342 aa14.84□□□□□ -0.03
RFFL-205ENST00000415395 COL22A1Q8NFW1 1626 aaPredicted RBP14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms