RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 ALDH1L2Q3SY69 923 aa18.54■□□□□ 0.56
PRKD1-202ENST00000415220 MRPL50Q8N5N7 158 aaKnown RBP18.54■□□□□ 0.56
PRKD1-202ENST00000415220 REREQ9P2R6 1566 aa18.53■□□□□ 0.56
PRKD1-202ENST00000415220 EDC4Q6P2E9 1401 aaKnown RBP18.53■□□□□ 0.56
PRKD1-202ENST00000415220 C22orf23Q9BZE7 217 aa18.53■□□□□ 0.56
PRKD1-202ENST00000415220 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
PRKD1-202ENST00000415220 IPO8O15397 1037 aaKnown RBP18.52■□□□□ 0.56
PRKD1-202ENST00000415220 NUCB1Q02818 461 aa18.52■□□□□ 0.55
PRKD1-202ENST00000415220 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.55
PRKD1-202ENST00000415220 NUTM2FA1L443 756 aa18.51■□□□□ 0.55
PRKD1-202ENST00000415220 ZBTB7BO15156 539 aaPredicted RBP18.51■□□□□ 0.55
PRKD1-202ENST00000415220 CDK12Q9NYV4 1490 aaPredicted RBP18.5■□□□□ 0.55
PRKD1-202ENST00000415220 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
PRKD1-202ENST00000415220 AEBP1Q8IUX7 1158 aa18.5■□□□□ 0.55
PRKD1-202ENST00000415220 MON2Q7Z3U7 1717 aa18.49■□□□□ 0.55
PRKD1-202ENST00000415220 SIRT2Q8IXJ6 389 aa18.49■□□□□ 0.55
PRKD1-202ENST00000415220 CHD1LQ86WJ1 897 aa18.48■□□□□ 0.55
PRKD1-202ENST00000415220 COG3Q96JB2 828 aa18.48■□□□□ 0.55
PRKD1-202ENST00000415220 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
PRKD1-202ENST00000415220 IFT57Q9NWB7 429 aa18.48■□□□□ 0.55
PRKD1-202ENST00000415220 C3P01024 1663 aa18.47■□□□□ 0.55
PRKD1-202ENST00000415220 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
PRKD1-202ENST00000415220 PTCH1Q13635 1447 aa18.47■□□□□ 0.55
PRKD1-202ENST00000415220 PPP6R1Q9UPN7 881 aa18.46■□□□□ 0.55
PRKD1-202ENST00000415220 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
PRKD1-202ENST00000415220 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
PRKD1-202ENST00000415220 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
PRKD1-202ENST00000415220 BRPF1P55201 1214 aaPredicted RBP18.46■□□□□ 0.55
PRKD1-202ENST00000415220 GNAI1P63096 354 aa18.46■□□□□ 0.55
PRKD1-202ENST00000415220 ANKRD45Q5TZF3 282 aa18.46■□□□□ 0.55
PRKD1-202ENST00000415220 PRKCSHP14314 528 aaPredicted RBP18.45■□□□□ 0.54
PRKD1-202ENST00000415220 AATKQ6ZMQ8 1374 aa18.45■□□□□ 0.54
PRKD1-202ENST00000415220 ITSN1Q15811 1721 aa18.44■□□□□ 0.54
PRKD1-202ENST00000415220 KNDC1Q76NI1 1749 aa18.44■□□□□ 0.54
PRKD1-202ENST00000415220 ABCC4O15439 1325 aa18.44■□□□□ 0.54
PRKD1-202ENST00000415220 PIK3R4Q99570 1358 aa18.44■□□□□ 0.54
PRKD1-202ENST00000415220 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
PRKD1-202ENST00000415220 SOX12O15370 315 aa18.43■□□□□ 0.54
PRKD1-202ENST00000415220 EIF4A2Q14240 407 aaKnown RBP18.42■□□□□ 0.54
PRKD1-202ENST00000415220 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.42■□□□□ 0.54
PRKD1-202ENST00000415220 SULT6B1Q6IMI4 303 aa18.42■□□□□ 0.54
PRKD1-202ENST00000415220 MCM10Q7L590 875 aa18.41■□□□□ 0.54
PRKD1-202ENST00000415220 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.41■□□□□ 0.54
PRKD1-202ENST00000415220 ZNF428Q96B54 188 aa18.41■□□□□ 0.54
PRKD1-202ENST00000415220 ARHGAP45Q92619 1136 aa18.4■□□□□ 0.54
PRKD1-202ENST00000415220 TECPR2O15040 1411 aa18.4■□□□□ 0.54
PRKD1-202ENST00000415220 PEAK1Q9H792 1746 aa18.4■□□□□ 0.54
PRKD1-202ENST00000415220 CALD1Q05682 793 aaKnown RBP18.4■□□□□ 0.54
PRKD1-202ENST00000415220 ESF1Q9H501 851 aaKnown RBP18.4■□□□□ 0.54
PRKD1-202ENST00000415220 HSP90AB2PQ58FF8 381 aa18.39■□□□□ 0.53
PRKD1-202ENST00000415220 ARXQ96QS3 562 aa18.39■□□□□ 0.53
PRKD1-202ENST00000415220 ACEP12821 1306 aa18.39■□□□□ 0.53
PRKD1-202ENST00000415220 UBR1Q8IWV7 1749 aa18.38■□□□□ 0.53
PRKD1-202ENST00000415220 NRKQ7Z2Y5 1582 aa18.38■□□□□ 0.53
PRKD1-202ENST00000415220 ADAMTS13Q76LX8 1427 aa18.38■□□□□ 0.53
PRKD1-202ENST00000415220 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
PRKD1-202ENST00000415220 TNRQ92752 1358 aa18.38■□□□□ 0.53
PRKD1-202ENST00000415220 CD2BP2O95400 341 aaKnown RBP18.38■□□□□ 0.53
PRKD1-202ENST00000415220 LTKP29376 864 aa18.38■□□□□ 0.53
PRKD1-202ENST00000415220 KIF2CQ99661 725 aa18.38■□□□□ 0.53
PRKD1-202ENST00000415220 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
PRKD1-202ENST00000415220 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
PRKD1-202ENST00000415220 TMEM2Q9UHN6 1383 aa18.37■□□□□ 0.53
PRKD1-202ENST00000415220 RIMS1Q86UR5 1692 aaKnown RBP18.37■□□□□ 0.53
PRKD1-202ENST00000415220 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
PRKD1-202ENST00000415220 KIF13AQ9H1H9 1805 aa18.37■□□□□ 0.53
PRKD1-202ENST00000415220 GCC1Q96CN9 775 aa18.36■□□□□ 0.53
PRKD1-202ENST00000415220 MIS18AQ9NYP9 233 aa18.36■□□□□ 0.53
PRKD1-202ENST00000415220 TBC1D9Q6ZT07 1266 aa18.36■□□□□ 0.53
PRKD1-202ENST00000415220 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
PRKD1-202ENST00000415220 SLC26A8Q96RN1 970 aa18.36■□□□□ 0.53
PRKD1-202ENST00000415220 GZF1Q9H116 711 aaPredicted RBP18.36■□□□□ 0.53
PRKD1-202ENST00000415220 RGS12O14924 1447 aa18.35■□□□□ 0.53
PRKD1-202ENST00000415220 C16orf71Q8IYS4 520 aaPredicted RBP18.35■□□□□ 0.53
PRKD1-202ENST00000415220 FOXO3O43524 673 aa18.35■□□□□ 0.53
PRKD1-202ENST00000415220 MCM4P33991 863 aa18.35■□□□□ 0.53
PRKD1-202ENST00000415220 CEBPAP49715 358 aaPredicted RBP18.35■□□□□ 0.53
PRKD1-202ENST00000415220 LMOD3Q0VAK6 560 aa18.35■□□□□ 0.53
PRKD1-202ENST00000415220 HSCBQ8IWL3 235 aa18.35■□□□□ 0.53
PRKD1-202ENST00000415220 GSPT1P15170 499 aaKnown RBP18.34■□□□□ 0.53
PRKD1-202ENST00000415220 PLPPR3Q6T4P5 718 aa18.34■□□□□ 0.53
PRKD1-202ENST00000415220 OVOS2A0A0J9YW53 1432 aa18.34■□□□□ 0.53
PRKD1-202ENST00000415220 OVOS2Q6IE36 1432 aa18.34■□□□□ 0.53
PRKD1-202ENST00000415220 TOPAZ1Q8N9V7 1692 aa18.34■□□□□ 0.53
PRKD1-202ENST00000415220 SIRT1Q96EB6 747 aa18.33■□□□□ 0.53
PRKD1-202ENST00000415220 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.53
PRKD1-202ENST00000415220 PTPRUQ92729 1446 aa18.33■□□□□ 0.53
PRKD1-202ENST00000415220 OTUD7AQ8TE49 926 aaPredicted RBP18.33■□□□□ 0.52
PRKD1-202ENST00000415220 CHMP5Q9NZZ3 219 aa18.33■□□□□ 0.52
PRKD1-202ENST00000415220 API5Q9BZZ5 524 aaKnown RBP18.32■□□□□ 0.52
PRKD1-202ENST00000415220 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
PRKD1-202ENST00000415220 DDIT3P35638 169 aa18.31■□□□□ 0.52
PRKD1-202ENST00000415220 USP6P35125 1406 aa18.31■□□□□ 0.52
PRKD1-202ENST00000415220 CHL1O00533 1208 aa18.31■□□□□ 0.52
PRKD1-202ENST00000415220 ATP10DQ9P241 1426 aa18.3■□□□□ 0.52
PRKD1-202ENST00000415220 MSH6P52701 1360 aa18.3■□□□□ 0.52
PRKD1-202ENST00000415220 RGPD1P0DJD0 1748 aa18.3■□□□□ 0.52
PRKD1-202ENST00000415220 APBB1O00213 710 aa18.3■□□□□ 0.52
PRKD1-202ENST00000415220 PLEKHM2Q8IWE5 1019 aa18.3■□□□□ 0.52
PRKD1-202ENST00000415220 MAP3K19Q56UN5 1328 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms