RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 FOXD4L6Q3SYB3 417 aaPredicted RBP18.1■□□□□ 0.49
SEMA3F-202ENST00000413852 FOXD4L3Q6VB84 417 aaPredicted RBP18.1■□□□□ 0.49
SEMA3F-202ENST00000413852 TERF2IPQ9NYB0 399 aa18.1■□□□□ 0.49
SEMA3F-202ENST00000413852 TWISTNBQ3B726 338 aaPredicted RBP18.09■□□□□ 0.49
SEMA3F-202ENST00000413852 TSHZ3Q63HK5 1081 aa18.09■□□□□ 0.49
SEMA3F-202ENST00000413852 NOL8Q76FK4 1167 aaKnown RBP18.09■□□□□ 0.49
SEMA3F-202ENST00000413852 PLEKHM2Q8IWE5 1019 aa18.09■□□□□ 0.49
SEMA3F-202ENST00000413852 PPLO60437 1756 aa18.09■□□□□ 0.49
SEMA3F-202ENST00000413852 ALDH1L2Q3SY69 923 aa18.09■□□□□ 0.49
SEMA3F-202ENST00000413852 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.49
SEMA3F-202ENST00000413852 IL16Q14005 1332 aa18.08■□□□□ 0.49
SEMA3F-202ENST00000413852 MPNDQ8N594 471 aa18.08■□□□□ 0.48
SEMA3F-202ENST00000413852 ZMYND15Q9H091 742 aa18.08■□□□□ 0.48
SEMA3F-202ENST00000413852 KIAA1211Q6ZU35 1233 aa18.08■□□□□ 0.48
SEMA3F-202ENST00000413852 UHRF1BP1LA0JNW5 1464 aa18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 NSD2O96028 1365 aa18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 ASXL2Q76L83 1435 aa18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 CDC45O75419 566 aa18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 NME9Q86XW9 330 aa18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 NSFL1CQ9UNZ2 370 aaKnown RBP18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 GCC1Q96CN9 775 aa18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 CIZ1Q9ULV3 898 aaPredicted RBP18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 ABCA9Q8IUA7 1624 aa18.07■□□□□ 0.48
SEMA3F-202ENST00000413852 CD163L1Q9NR16 1453 aa18.06■□□□□ 0.48
SEMA3F-202ENST00000413852 RBSNQ9H1K0 784 aa18.06■□□□□ 0.48
SEMA3F-202ENST00000413852 FCHSD2O94868 740 aa18.06■□□□□ 0.48
SEMA3F-202ENST00000413852 NFE2L2Q16236 605 aa18.06■□□□□ 0.48
SEMA3F-202ENST00000413852 HDGFL2Q7Z4V5 671 aaPredicted RBP18.06■□□□□ 0.48
SEMA3F-202ENST00000413852 LRRC7Q96NW7 1537 aa18.06■□□□□ 0.48
SEMA3F-202ENST00000413852 ARHGEF28Q8N1W1 1705 aaKnown RBP18.05■□□□□ 0.48
SEMA3F-202ENST00000413852 MIS18AQ9NYP9 233 aa18.04■□□□□ 0.48
SEMA3F-202ENST00000413852 SOX12O15370 315 aa18.04■□□□□ 0.48
SEMA3F-202ENST00000413852 DTNBO60941 627 aa18.04■□□□□ 0.48
SEMA3F-202ENST00000413852 PRIM1P49642 420 aaKnown RBP18.04■□□□□ 0.48
SEMA3F-202ENST00000413852 ZSCAN23Q3MJ62 389 aa18.04■□□□□ 0.48
SEMA3F-202ENST00000413852 RPGRIP1LQ68CZ1 1315 aa18.03■□□□□ 0.48
SEMA3F-202ENST00000413852 SKOR2Q2VWA4 1001 aaPredicted RBP18.03■□□□□ 0.48
SEMA3F-202ENST00000413852 USP32Q8NFA0 1604 aa18.03■□□□□ 0.48
SEMA3F-202ENST00000413852 CFAP74Q9C0B2 1584 aa18.03■□□□□ 0.48
SEMA3F-202ENST00000413852 XPCQ01831 940 aaPredicted RBP18.03■□□□□ 0.48
SEMA3F-202ENST00000413852 AEBP1Q8IUX7 1158 aa18.02■□□□□ 0.48
SEMA3F-202ENST00000413852 RNF214Q8ND24 703 aa18.02■□□□□ 0.48
SEMA3F-202ENST00000413852 LMBRD1Q9NUN5 540 aa18.02■□□□□ 0.48
SEMA3F-202ENST00000413852 NEURL4Q96JN8 1562 aa18.02■□□□□ 0.48
SEMA3F-202ENST00000413852 SDSP20132 328 aa18.02■□□□□ 0.48
SEMA3F-202ENST00000413852 GPT2Q8TD30 523 aa18.02■□□□□ 0.48
SEMA3F-202ENST00000413852 USP26Q9BXU7 913 aa18.02■□□□□ 0.48
SEMA3F-202ENST00000413852 GOLGA6L22H0YM25 854 aa18.02■□□□□ 0.47
SEMA3F-202ENST00000413852 SIGLEC1Q9BZZ2 1709 aa18.02■□□□□ 0.47
SEMA3F-202ENST00000413852 KLHL40Q2TBA0 621 aa18.01■□□□□ 0.47
SEMA3F-202ENST00000413852 TTC22Q5TAA0 569 aa18.01■□□□□ 0.47
SEMA3F-202ENST00000413852 ZDHHC9Q9Y397 364 aa18.01■□□□□ 0.47
SEMA3F-202ENST00000413852 ABCC4O15439 1325 aa18.01■□□□□ 0.47
SEMA3F-202ENST00000413852 FRMPD1Q5SYB0 1578 aa18.01■□□□□ 0.47
SEMA3F-202ENST00000413852 PKNOX2Q96KN3 472 aa18.01■□□□□ 0.47
SEMA3F-202ENST00000413852 R3HCC1Q9Y3T6 440 aaKnown RBP18.01■□□□□ 0.47
SEMA3F-202ENST00000413852 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
SEMA3F-202ENST00000413852 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
SEMA3F-202ENST00000413852 MCM10Q7L590 875 aa18■□□□□ 0.47
SEMA3F-202ENST00000413852 NUTM2FA1L443 756 aa18■□□□□ 0.47
SEMA3F-202ENST00000413852 MEIS3Q99687 375 aa18■□□□□ 0.47
SEMA3F-202ENST00000413852 RRP9O43818 475 aaKnown RBP17.99■□□□□ 0.47
SEMA3F-202ENST00000413852 CCDC173Q0VFZ6 552 aa17.99■□□□□ 0.47
SEMA3F-202ENST00000413852 MED14O60244 1454 aa17.99■□□□□ 0.47
SEMA3F-202ENST00000413852 GNAI1P63096 354 aa17.99■□□□□ 0.47
SEMA3F-202ENST00000413852 FAM135BQ49AJ0 1406 aa17.99■□□□□ 0.47
SEMA3F-202ENST00000413852 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
SEMA3F-202ENST00000413852 NEXMIFQ5QGS0 1516 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 ARAP3Q8WWN8 1544 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 SYCE3A1L190 88 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 IL13P35225 146 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 ZSCAN30Q86W11 494 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 F6X3S4 739 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 PPP1R9BQ96SB3 815 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 STAG3Q9UJ98 1225 aa17.98■□□□□ 0.47
SEMA3F-202ENST00000413852 MSNP26038 577 aaKnown RBP17.97■□□□□ 0.47
SEMA3F-202ENST00000413852 SLC4A10Q6U841 1118 aa17.97■□□□□ 0.47
SEMA3F-202ENST00000413852 ABCC3O15438 1527 aa17.97■□□□□ 0.47
SEMA3F-202ENST00000413852 DCTPP1Q9H773 170 aa17.97■□□□□ 0.47
SEMA3F-202ENST00000413852 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 JARID2Q92833 1246 aaPredicted RBP17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 GDPD2Q9HCC8 539 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 IFT57Q9NWB7 429 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 TMEM63CQ9P1W3 806 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 ZNF853P0CG23 659 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 RABEP1Q15276 862 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 ANP32BQ92688 251 aaKnown RBP17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 PUS7Q96PZ0 661 aaKnown RBP17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 FAM13BQ9NYF5 915 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 PTPRMP28827 1452 aa17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 ISY1Q9ULR0 285 aaKnown RBP17.96■□□□□ 0.47
SEMA3F-202ENST00000413852 PTCH1Q13635 1447 aa17.95■□□□□ 0.46
SEMA3F-202ENST00000413852 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
SEMA3F-202ENST00000413852 GLIPR1L2Q4G1C9 344 aa17.95■□□□□ 0.46
SEMA3F-202ENST00000413852 CEP85Q6P2H3 762 aa17.94■□□□□ 0.46
SEMA3F-202ENST00000413852 ARHGAP45Q92619 1136 aa17.94■□□□□ 0.46
SEMA3F-202ENST00000413852 NECTIN2Q92692 538 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms