RNA–Protein interactions for RNA: ENST00000413440.5

PRDM2-206, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-206ENST00000413440 SULT6B1Q6IMI4 303 aa7.34□□□□□ -1.23
PRDM2-206ENST00000413440 FAM196AQ6ZSG2 479 aa7.34□□□□□ -1.23
PRDM2-206ENST00000413440 PPM1FP49593 454 aaPredicted RBP7.34□□□□□ -1.23
PRDM2-206ENST00000413440 AIMP1Q12904 312 aaKnown RBP7.34□□□□□ -1.23
PRDM2-206ENST00000413440 R3HDM1Q15032 1099 aaKnown RBP7.34□□□□□ -1.23
PRDM2-206ENST00000413440 ZNF526Q8TF50 670 aaPredicted RBP7.34□□□□□ -1.24
PRDM2-206ENST00000413440 TRIM34Q9BYJ4 488 aa7.34□□□□□ -1.24
PRDM2-206ENST00000413440 HSP90AB1P08238 724 aaKnown RBP7.33□□□□□ -1.24
PRDM2-206ENST00000413440 HMGB2P26583 209 aaKnown RBP7.33□□□□□ -1.24
PRDM2-206ENST00000413440 NSD3Q9BZ95 1437 aa7.33□□□□□ -1.24
PRDM2-206ENST00000413440 FRAT1Q92837 279 aaPredicted RBP7.33□□□□□ -1.24
PRDM2-206ENST00000413440 ARHGAP31Q2M1Z3 1444 aa7.33□□□□□ -1.24
PRDM2-206ENST00000413440 TIMELESSQ9UNS1 1208 aa7.33□□□□□ -1.24
PRDM2-206ENST00000413440 CLTCL1P53675 1640 aa7.33□□□□□ -1.24
PRDM2-206ENST00000413440 PIK3R4Q99570 1358 aa7.33□□□□□ -1.24
PRDM2-206ENST00000413440 MROH2AA6NES4 1674 aa7.33□□□□□ -1.24
PRDM2-206ENST00000413440 TCEAL9Q9UHQ7 104 aa7.33□□□□□ -1.24
PRDM2-206ENST00000413440 CCNL1Q9UK58 526 aaPredicted RBP7.33□□□□□ -1.24
PRDM2-206ENST00000413440 E9PCH4 1651 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 PHLPP1O60346 1717 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 TTC21AQ8NDW8 1320 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 OS9Q13438 667 aaPredicted RBP7.32□□□□□ -1.24
PRDM2-206ENST00000413440 KIAA0232Q92628 1395 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 IQGAP3Q86VI3 1631 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 FAM83GA6ND36 823 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 ZNF622Q969S3 477 aaKnown RBP eCLIP7.32□□□□□ -1.249e-7■■■□□ 17.7
PRDM2-206ENST00000413440 SPDYE4A6NLX3 237 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 TMEM87AQ8NBN3 555 aa7.32□□□□□ -1.24
PRDM2-206ENST00000413440 UPF2Q9HAU5 1272 aaKnown RBP7.31□□□□□ -1.24
PRDM2-206ENST00000413440 EMILIN1Q9Y6C2 1016 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 RFX1P22670 979 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 NBR1Q14596 966 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 CDCA7Q9BWT1 371 aaPredicted RBP7.31□□□□□ -1.24
PRDM2-206ENST00000413440 GRM1Q13255 1194 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 LRRC7Q96NW7 1537 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 PARP3Q9Y6F1 533 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 ALKQ9UM73 1620 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 FRAT2O75474 233 aaPredicted RBP7.31□□□□□ -1.24
PRDM2-206ENST00000413440 POTEAQ6S8J7 498 aa7.31□□□□□ -1.24
PRDM2-206ENST00000413440 FTSJ3Q8IY81 847 aaKnown RBP7.31□□□□□ -1.24
PRDM2-206ENST00000413440 MYL6BP14649 208 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 KCNJ4P48050 445 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 STK31Q9BXU1 1019 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.3□□□□□ -1.247e-6■■■■■ 74.5
PRDM2-206ENST00000413440 TSPYL4Q9UJ04 414 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 SPATA31A3Q5VYP0 1347 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
PRDM2-206ENST00000413440 LMOD3Q0VAK6 560 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 POLR1AO95602 1720 aaPredicted RBP7.3□□□□□ -1.24
PRDM2-206ENST00000413440 SPATA31D1Q6ZQQ2 1576 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 BTBD11A6QL63 1104 aa7.3□□□□□ -1.24
PRDM2-206ENST00000413440 L1TD1Q5T7N2 865 aaKnown RBP7.3□□□□□ -1.24
PRDM2-206ENST00000413440 ELL2O00472 640 aaPredicted RBP7.3□□□□□ -1.24
PRDM2-206ENST00000413440 ZBTB7AO95365 584 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 NOP2P46087 812 aaKnown RBP7.29□□□□□ -1.24
PRDM2-206ENST00000413440 WWC2Q6AWC2 1192 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 CALD1Q05682 793 aaKnown RBP7.29□□□□□ -1.24
PRDM2-206ENST00000413440 GAS2L2Q8NHY3 880 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 KAT6BQ8WYB5 2073 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 PRIM1P49642 420 aaKnown RBP7.29□□□□□ -1.24
PRDM2-206ENST00000413440 REREQ9P2R6 1566 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 GNPATO15228 680 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 STARD3NLO95772 234 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 SLC4A10Q6U841 1118 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 DEFB132Q7Z7B7 95 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 PAF1Q8N7H5 531 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 UNC13BO14795 1591 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 C1orf167Q5SNV9 1468 aa7.29□□□□□ -1.24
PRDM2-206ENST00000413440 TNS3Q68CZ2 1445 aa7.28□□□□□ -1.24
PRDM2-206ENST00000413440 IFNL2Q8IZJ0 200 aa7.28□□□□□ -1.24
PRDM2-206ENST00000413440 VSIG10Q8N0Z9 540 aa7.28□□□□□ -1.24
PRDM2-206ENST00000413440 CLEC11AQ9Y240 323 aa7.28□□□□□ -1.24
PRDM2-206ENST00000413440 NKTRP30414 1462 aaKnown RBP7.28□□□□□ -1.24
PRDM2-206ENST00000413440 ABCC11Q96J66 1382 aa7.28□□□□□ -1.24
PRDM2-206ENST00000413440 B4GALNT3Q6L9W6 998 aa7.28□□□□□ -1.24
PRDM2-206ENST00000413440 SOCS7O14512 581 aa7.27□□□□□ -1.24
PRDM2-206ENST00000413440 KIAA2012Q0VF49 1180 aa7.27□□□□□ -1.24
PRDM2-206ENST00000413440 CHAF1AQ13111 956 aaPredicted RBP7.27□□□□□ -1.24
PRDM2-206ENST00000413440 SMARCC1Q92922 1105 aaPredicted RBP7.27□□□□□ -1.24
PRDM2-206ENST00000413440 SYNMO15061 1565 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 RIPK4P57078 832 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 EZH2Q15910 746 aaKnown RBP7.27□□□□□ -1.25
PRDM2-206ENST00000413440 RTCBQ9Y3I0 505 aaKnown RBP7.27□□□□□ -1.25
PRDM2-206ENST00000413440 ILDR2Q71H61 639 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 UBR1Q8IWV7 1749 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 PCDH11XQ9BZA7 1347 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 PCDH11YQ9BZA8 1340 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 KCNQ4P56696 695 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 RIC3Q7Z5B4 369 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 BEGAINQ9BUH8 593 aa7.27□□□□□ -1.25
PRDM2-206ENST00000413440 HOXC9P31274 260 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 PRKAR2BP31323 418 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 C11orf95C9JLR9 678 aaPredicted RBP7.26□□□□□ -1.25
PRDM2-206ENST00000413440 RGS3P49796 1198 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 TRAPPC3LQ5T215 181 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 PRAG1Q86YV5 1406 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 VPS72Q15906 364 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 HSP90AB2PQ58FF8 381 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 PTPRUQ92729 1446 aa7.26□□□□□ -1.25
PRDM2-206ENST00000413440 ST5P78524 1137 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms