RNA–Protein interactions for RNA: ENST00000413197.5

COPS7B-210, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 2,442 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-210ENST00000413197 NCOA3Q9Y6Q9 1424 aa17.42■□□□□ 0.38
COPS7B-210ENST00000413197 DZIP1LQ8IYY4 767 aaKnown RBP17.41■□□□□ 0.38
COPS7B-210ENST00000413197 MTHFSP49914 203 aa17.41■□□□□ 0.38
COPS7B-210ENST00000413197 MRE11P49959 708 aa17.4■□□□□ 0.38
COPS7B-210ENST00000413197 SPRYD3Q8NCJ5 442 aa17.4■□□□□ 0.38
COPS7B-210ENST00000413197 RBM33Q96EV2 1170 aaKnown RBP17.4■□□□□ 0.38
COPS7B-210ENST00000413197 SLC12A5Q9H2X9 1139 aa17.4■□□□□ 0.38
COPS7B-210ENST00000413197 DDIT3P35638 169 aa17.39■□□□□ 0.37
COPS7B-210ENST00000413197 MFAP1P55081 439 aaKnown RBP17.39■□□□□ 0.37
COPS7B-210ENST00000413197 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
COPS7B-210ENST00000413197 FTSJ3Q8IY81 847 aaKnown RBP17.39■□□□□ 0.37
COPS7B-210ENST00000413197 GZF1Q9H116 711 aaPredicted RBP17.39■□□□□ 0.37
COPS7B-210ENST00000413197 ISY1Q9ULR0 285 aaKnown RBP17.39■□□□□ 0.37
COPS7B-210ENST00000413197 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
COPS7B-210ENST00000413197 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
COPS7B-210ENST00000413197 QRICH2Q9H0J4 1663 aa17.38■□□□□ 0.37
COPS7B-210ENST00000413197 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
COPS7B-210ENST00000413197 SMC5Q8IY18 1101 aa17.38■□□□□ 0.37
COPS7B-210ENST00000413197 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
COPS7B-210ENST00000413197 NSD2O96028 1365 aa17.36■□□□□ 0.37
COPS7B-210ENST00000413197 HSCBQ8IWL3 235 aa17.36■□□□□ 0.37
COPS7B-210ENST00000413197 DDX19BQ9UMR2 479 aa17.36■□□□□ 0.37
COPS7B-210ENST00000413197 AMOTL2Q9Y2J4 779 aa17.36■□□□□ 0.37
COPS7B-210ENST00000413197 TRIM27P14373 513 aa17.36■□□□□ 0.37
COPS7B-210ENST00000413197 GLIPR1L2Q4G1C9 344 aa17.36■□□□□ 0.37
COPS7B-210ENST00000413197 TBX22Q9Y458 520 aa17.36■□□□□ 0.37
COPS7B-210ENST00000413197 NPHP4O75161 1426 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-210ENST00000413197 KCNA6P17658 529 aa17.35■□□□□ 0.37
COPS7B-210ENST00000413197 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
COPS7B-210ENST00000413197 SNX21Q969T3 373 aa17.35■□□□□ 0.37
COPS7B-210ENST00000413197 ZMYND15Q9H091 742 aa17.35■□□□□ 0.37
COPS7B-210ENST00000413197 ABCC11Q96J66 1382 aa17.35■□□□□ 0.37
COPS7B-210ENST00000413197 GRPEL1Q9HAV7 217 aa17.34■□□□□ 0.37
COPS7B-210ENST00000413197 PUS7Q96PZ0 661 aaKnown RBP17.33■□□□□ 0.37
COPS7B-210ENST00000413197 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
COPS7B-210ENST00000413197 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.36
COPS7B-210ENST00000413197 VSIG10Q8N0Z9 540 aa17.33■□□□□ 0.36
COPS7B-210ENST00000413197 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.36
COPS7B-210ENST00000413197 U2AF1L5P0DN76 240 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-210ENST00000413197 U2AF1Q01081 240 aaKnown RBP eCLIP17.32■□□□□ 0.36
COPS7B-210ENST00000413197 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
COPS7B-210ENST00000413197 TSR2Q969E8 191 aaKnown RBP17.32■□□□□ 0.36
COPS7B-210ENST00000413197 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
COPS7B-210ENST00000413197 SSH1Q8WYL5 1049 aa17.31■□□□□ 0.36
COPS7B-210ENST00000413197 CIZ1Q9ULV3 898 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-210ENST00000413197 ANKRD36BQ8N2N9 1353 aa17.31■□□□□ 0.36
COPS7B-210ENST00000413197 STRCQ7RTU9 1775 aa17.31■□□□□ 0.36
COPS7B-210ENST00000413197 ITPRIPQ8IWB1 547 aa17.3■□□□□ 0.36
COPS7B-210ENST00000413197 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
COPS7B-210ENST00000413197 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
COPS7B-210ENST00000413197 ZBTB40Q9NUA8 1239 aa17.3■□□□□ 0.36
COPS7B-210ENST00000413197 TECPR2O15040 1411 aa17.3■□□□□ 0.36
COPS7B-210ENST00000413197 IL16Q14005 1332 aa17.29■□□□□ 0.36
COPS7B-210ENST00000413197 NUCB1Q02818 461 aa17.29■□□□□ 0.36
COPS7B-210ENST00000413197 TRIM35Q9UPQ4 493 aa17.29■□□□□ 0.36
COPS7B-210ENST00000413197 CPS1P31327 1500 aa17.28■□□□□ 0.36
COPS7B-210ENST00000413197 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
COPS7B-210ENST00000413197 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
COPS7B-210ENST00000413197 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-210ENST00000413197 ESPNB1AK53 854 aa17.28■□□□□ 0.36
COPS7B-210ENST00000413197 TNPO1Q92973 898 aaKnown RBP17.28■□□□□ 0.36
COPS7B-210ENST00000413197 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.36
COPS7B-210ENST00000413197 RAB3GAP1Q15042 981 aa17.27■□□□□ 0.36
COPS7B-210ENST00000413197 TMEM57Q8N5G2 664 aa17.27■□□□□ 0.36
COPS7B-210ENST00000413197 NOB1Q9ULX3 412 aaKnown RBP17.27■□□□□ 0.36
COPS7B-210ENST00000413197 CCDC9Q9Y3X0 531 aaKnown RBP17.27■□□□□ 0.36
COPS7B-210ENST00000413197 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-210ENST00000413197 XRN1Q8IZH2 1706 aaKnown RBP17.27■□□□□ 0.36
COPS7B-210ENST00000413197 DIP2AQ14689 1571 aa17.27■□□□□ 0.35
COPS7B-210ENST00000413197 KNDC1Q76NI1 1749 aa17.27■□□□□ 0.35
COPS7B-210ENST00000413197 ERBB4Q15303 1308 aa17.26■□□□□ 0.35
COPS7B-210ENST00000413197 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
COPS7B-210ENST00000413197 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
COPS7B-210ENST00000413197 GBP4Q96PP9 640 aa17.25■□□□□ 0.35
COPS7B-210ENST00000413197 CDK19Q9BWU1 502 aa17.25■□□□□ 0.35
COPS7B-210ENST00000413197 PTMSP20962 102 aa17.25■□□□□ 0.35
COPS7B-210ENST00000413197 SRPK2P78362 688 aaKnown RBP17.25■□□□□ 0.35
COPS7B-210ENST00000413197 SKOR2Q2VWA4 1001 aaPredicted RBP17.25■□□□□ 0.35
COPS7B-210ENST00000413197 GAS2L3Q86XJ1 694 aa17.25■□□□□ 0.35
COPS7B-210ENST00000413197 KIF2CQ99661 725 aa17.25■□□□□ 0.35
COPS7B-210ENST00000413197 EVC2Q86UK5 1308 aa17.24■□□□□ 0.35
COPS7B-210ENST00000413197 RRP9O43818 475 aaKnown RBP17.24■□□□□ 0.35
COPS7B-210ENST00000413197 BMP2KLQ5H9B9 411 aa17.24■□□□□ 0.35
COPS7B-210ENST00000413197 STRCP1A6NGW2 1772 aa17.24■□□□□ 0.35
COPS7B-210ENST00000413197 FAM135BQ49AJ0 1406 aa17.24■□□□□ 0.35
COPS7B-210ENST00000413197 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
COPS7B-210ENST00000413197 CHD1LQ86WJ1 897 aa17.23■□□□□ 0.35
COPS7B-210ENST00000413197 IPO8O15397 1037 aaKnown RBP17.22■□□□□ 0.35
COPS7B-210ENST00000413197 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
COPS7B-210ENST00000413197 ALDH1L2Q3SY69 923 aa17.21■□□□□ 0.35
COPS7B-210ENST00000413197 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
COPS7B-210ENST00000413197 PTCH1Q13635 1447 aa17.21■□□□□ 0.35
COPS7B-210ENST00000413197 PRR36Q9H6K5 1346 aa17.21■□□□□ 0.35
COPS7B-210ENST00000413197 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
COPS7B-210ENST00000413197 ZNF335Q9H4Z2 1342 aaPredicted RBP17.2■□□□□ 0.34
COPS7B-210ENST00000413197 PIK3R4Q99570 1358 aa17.2■□□□□ 0.34
COPS7B-210ENST00000413197 WASLO00401 505 aaPredicted RBP17.2■□□□□ 0.34
COPS7B-210ENST00000413197 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
COPS7B-210ENST00000413197 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
COPS7B-210ENST00000413197 CLEC17AQ6ZS10 378 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms