RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 IFT57Q9NWB7 429 aa23.83■■□□□ 1.4
TNFRSF8-202ENST00000413146 PIK3R4Q99570 1358 aa23.82■■□□□ 1.4
TNFRSF8-202ENST00000413146 EDC4Q6P2E9 1401 aaKnown RBP23.82■■□□□ 1.4
TNFRSF8-202ENST00000413146 CDK12Q9NYV4 1490 aaPredicted RBP23.82■■□□□ 1.4
TNFRSF8-202ENST00000413146 EMILIN1Q9Y6C2 1016 aa23.81■■□□□ 1.4
TNFRSF8-202ENST00000413146 REREQ9P2R6 1566 aa23.81■■□□□ 1.4
TNFRSF8-202ENST00000413146 ANKRD45Q5TZF3 282 aa23.8■■□□□ 1.4
TNFRSF8-202ENST00000413146 A2ML1A8K2U0 1454 aa23.8■■□□□ 1.4
TNFRSF8-202ENST00000413146 TSPYL6Q8N831 410 aa23.8■■□□□ 1.4
TNFRSF8-202ENST00000413146 NCOA3Q9Y6Q9 1424 aa23.8■■□□□ 1.4
TNFRSF8-202ENST00000413146 SNX21Q969T3 373 aa23.79■■□□□ 1.4
TNFRSF8-202ENST00000413146 RIMS2Q9UQ26 1411 aa23.79■■□□□ 1.4
TNFRSF8-202ENST00000413146 DLG5Q8TDM6 1919 aa23.79■■□□□ 1.4
TNFRSF8-202ENST00000413146 IL13P35225 146 aa23.79■■□□□ 1.4
TNFRSF8-202ENST00000413146 C1orf115Q9H7X2 142 aa23.79■■□□□ 1.4
TNFRSF8-202ENST00000413146 GOLGA6L3A6NEY3 463 aa23.78■■□□□ 1.4
TNFRSF8-202ENST00000413146 MBIPQ9NS73 344 aa23.78■■□□□ 1.4
TNFRSF8-202ENST00000413146 CPSF1Q10570 1443 aaKnown RBP23.78■■□□□ 1.4
TNFRSF8-202ENST00000413146 LMOD3Q0VAK6 560 aa23.78■■□□□ 1.4
TNFRSF8-202ENST00000413146 ABCC4O15439 1325 aa23.77■■□□□ 1.4
TNFRSF8-202ENST00000413146 ZNF853P0CG23 659 aa23.77■■□□□ 1.4
TNFRSF8-202ENST00000413146 NME9Q86XW9 330 aa23.77■■□□□ 1.4
TNFRSF8-202ENST00000413146 DDX11L8A8MPP1 907 aa23.76■■□□□ 1.39
TNFRSF8-202ENST00000413146 ELL2O00472 640 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF8-202ENST00000413146 TWISTNBQ3B726 338 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF8-202ENST00000413146 ZNF692Q9BU19 519 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF8-202ENST00000413146 TRAK2O60296 914 aa23.76■■□□□ 1.39
TNFRSF8-202ENST00000413146 GZF1Q9H116 711 aaPredicted RBP23.76■■□□□ 1.39
TNFRSF8-202ENST00000413146 AATKQ6ZMQ8 1374 aa23.76■■□□□ 1.39
TNFRSF8-202ENST00000413146 SPATA31D1Q6ZQQ2 1576 aa23.75■■□□□ 1.39
TNFRSF8-202ENST00000413146 WASLO00401 505 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF8-202ENST00000413146 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.74■■□□□ 1.39
TNFRSF8-202ENST00000413146 ARXQ96QS3 562 aa23.74■■□□□ 1.39
TNFRSF8-202ENST00000413146 HSP90AB1P08238 724 aaKnown RBP23.73■■□□□ 1.39
TNFRSF8-202ENST00000413146 CFAP44Q96MT7 982 aa23.73■■□□□ 1.39
TNFRSF8-202ENST00000413146 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
TNFRSF8-202ENST00000413146 AGLP35573 1532 aa23.73■■□□□ 1.39
TNFRSF8-202ENST00000413146 FSD2A1L4K1 749 aa23.73■■□□□ 1.39
TNFRSF8-202ENST00000413146 API5Q9BZZ5 524 aaKnown RBP23.73■■□□□ 1.39
TNFRSF8-202ENST00000413146 MON2Q7Z3U7 1717 aa23.72■■□□□ 1.39
TNFRSF8-202ENST00000413146 DDIT3P35638 169 aa23.72■■□□□ 1.39
TNFRSF8-202ENST00000413146 COG3Q96JB2 828 aa23.72■■□□□ 1.39
TNFRSF8-202ENST00000413146 ZRANB1Q9UGI0 708 aa23.71■■□□□ 1.39
TNFRSF8-202ENST00000413146 SIRT2Q8IXJ6 389 aa23.71■■□□□ 1.39
TNFRSF8-202ENST00000413146 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
TNFRSF8-202ENST00000413146 TBC1D9Q6ZT07 1266 aa23.7■■□□□ 1.38
TNFRSF8-202ENST00000413146 C8orf58Q8NAV2 365 aa23.7■■□□□ 1.38
TNFRSF8-202ENST00000413146 CIZ1Q9ULV3 898 aaPredicted RBP23.7■■□□□ 1.38
TNFRSF8-202ENST00000413146 XRCC6P12956 609 aaKnown RBP eCLIP23.7■■□□□ 1.38
TNFRSF8-202ENST00000413146 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
TNFRSF8-202ENST00000413146 ITSN1Q15811 1721 aa23.69■■□□□ 1.38
TNFRSF8-202ENST00000413146 CPS1P31327 1500 aa23.68■■□□□ 1.38
TNFRSF8-202ENST00000413146 RRS1Q15050 365 aaKnown RBP23.68■■□□□ 1.38
TNFRSF8-202ENST00000413146 NUDT16Q96DE0 195 aaKnown RBP23.68■■□□□ 1.38
TNFRSF8-202ENST00000413146 KIF2CQ99661 725 aa23.67■■□□□ 1.38
TNFRSF8-202ENST00000413146 AKAP12Q02952 1782 aa23.67■■□□□ 1.38
TNFRSF8-202ENST00000413146 KIF24Q5T7B8 1368 aa23.67■■□□□ 1.38
TNFRSF8-202ENST00000413146 C3P01024 1663 aa23.66■■□□□ 1.38
TNFRSF8-202ENST00000413146 FAM83GA6ND36 823 aa23.66■■□□□ 1.38
TNFRSF8-202ENST00000413146 HSP90AA1P07900 732 aaKnown RBP23.66■■□□□ 1.38
TNFRSF8-202ENST00000413146 KNDC1Q76NI1 1749 aa23.66■■□□□ 1.38
TNFRSF8-202ENST00000413146 METP08581 1390 aa23.66■■□□□ 1.38
TNFRSF8-202ENST00000413146 CDC45O75419 566 aa23.65■■□□□ 1.38
TNFRSF8-202ENST00000413146 TXNDC2Q86VQ3 553 aa23.65■■□□□ 1.38
TNFRSF8-202ENST00000413146 TNPO1Q92973 898 aaKnown RBP23.65■■□□□ 1.38
TNFRSF8-202ENST00000413146 GBP4Q96PP9 640 aa23.65■■□□□ 1.38
TNFRSF8-202ENST00000413146 CCDC61Q9Y6R9 512 aa23.65■■□□□ 1.38
TNFRSF8-202ENST00000413146 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.38
TNFRSF8-202ENST00000413146 NRKQ7Z2Y5 1582 aa23.63■■□□□ 1.37
TNFRSF8-202ENST00000413146 K7ELQ4 463 aaPredicted RBP23.63■■□□□ 1.37
TNFRSF8-202ENST00000413146 MRE11P49959 708 aa23.63■■□□□ 1.37
TNFRSF8-202ENST00000413146 DCTN1Q14203 1278 aa23.63■■□□□ 1.37
TNFRSF8-202ENST00000413146 RAB3GAP1Q15042 981 aa23.63■■□□□ 1.37
TNFRSF8-202ENST00000413146 NCKAP5LQ9HCH0 1330 aa23.62■■□□□ 1.37
TNFRSF8-202ENST00000413146 EIF5BO60841 1220 aaKnown RBP23.62■■□□□ 1.37
TNFRSF8-202ENST00000413146 PANK2Q9BZ23 570 aa23.62■■□□□ 1.37
TNFRSF8-202ENST00000413146 CD2BP2O95400 341 aaKnown RBP23.6■■□□□ 1.37
TNFRSF8-202ENST00000413146 HAP1P54257 671 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF8-202ENST00000413146 MLECQ14165 292 aa23.6■■□□□ 1.37
TNFRSF8-202ENST00000413146 RRAGDQ9NQL2 400 aaPredicted RBP23.6■■□□□ 1.37
TNFRSF8-202ENST00000413146 ISY1Q9ULR0 285 aaKnown RBP23.6■■□□□ 1.37
TNFRSF8-202ENST00000413146 TRHP20396 242 aaPredicted RBP23.59■■□□□ 1.37
TNFRSF8-202ENST00000413146 PTMSP20962 102 aa23.59■■□□□ 1.37
TNFRSF8-202ENST00000413146 TECPR2O15040 1411 aa23.59■■□□□ 1.37
TNFRSF8-202ENST00000413146 GSPT1P15170 499 aaKnown RBP23.59■■□□□ 1.37
TNFRSF8-202ENST00000413146 INTS3Q68E01 1043 aaKnown RBP23.59■■□□□ 1.37
TNFRSF8-202ENST00000413146 DCTPP1Q9H773 170 aa23.59■■□□□ 1.37
TNFRSF8-202ENST00000413146 PLEKHM2Q8IWE5 1019 aa23.58■■□□□ 1.37
TNFRSF8-202ENST00000413146 SIRT1Q96EB6 747 aa23.58■■□□□ 1.37
TNFRSF8-202ENST00000413146 RBM42Q9BTD8 480 aaKnown RBP23.58■■□□□ 1.37
TNFRSF8-202ENST00000413146 FOXD4L1Q9NU39 408 aa23.58■■□□□ 1.37
TNFRSF8-202ENST00000413146 GRPEL1Q9HAV7 217 aa23.57■■□□□ 1.36
TNFRSF8-202ENST00000413146 SKOR2Q2VWA4 1001 aaPredicted RBP23.56■■□□□ 1.36
TNFRSF8-202ENST00000413146 TTC22Q5TAA0 569 aa23.56■■□□□ 1.36
TNFRSF8-202ENST00000413146 SULT6B1Q6IMI4 303 aa23.56■■□□□ 1.36
TNFRSF8-202ENST00000413146 AEBP1Q8IUX7 1158 aa23.56■■□□□ 1.36
TNFRSF8-202ENST00000413146 EIF4A2Q14240 407 aaKnown RBP23.55■■□□□ 1.36
TNFRSF8-202ENST00000413146 ANKRD44Q8N8A2 993 aa23.55■■□□□ 1.36
TNFRSF8-202ENST00000413146 ATP10DQ9P241 1426 aa23.55■■□□□ 1.36
TNFRSF8-202ENST00000413146 PRR36Q9H6K5 1346 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms