RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SRPK2P78362 688 aaKnown RBP6.35□□□□□ -1.39
HERC4-205ENST00000412272 SKOR2Q2VWA4 1001 aaPredicted RBP6.35□□□□□ -1.39
HERC4-205ENST00000412272 CLEC17AQ6ZS10 378 aa6.35□□□□□ -1.39
HERC4-205ENST00000412272 MICALL1Q8N3F8 863 aa6.35□□□□□ -1.39
HERC4-205ENST00000412272 PDLIM2Q96JY6 352 aa6.35□□□□□ -1.39
HERC4-205ENST00000412272 PHF8Q9UPP1 1060 aa6.35□□□□□ -1.39
HERC4-205ENST00000412272 KNSTRNQ9Y448 316 aa6.35□□□□□ -1.39
HERC4-205ENST00000412272 ZSCAN26Q16670 478 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 RPAINQ86UA6 219 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 SKAP1Q86WV1 359 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 MORC2Q9Y6X9 1032 aaPredicted RBP6.34□□□□□ -1.39
HERC4-205ENST00000412272 ZNF608Q9ULD9 1512 aaPredicted RBP6.34□□□□□ -1.39
HERC4-205ENST00000412272 POLA1P09884 1462 aaPredicted RBP6.34□□□□□ -1.39
HERC4-205ENST00000412272 KIF15Q9NS87 1388 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 TPM3P06753 285 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 CALRP27797 417 aaKnown RBP6.34□□□□□ -1.39
HERC4-205ENST00000412272 TATDN2Q93075 761 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 ZNF232Q9UNY5 417 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 FAM177BA6PVY3 158 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 CCDC91Q7Z6B0 441 aa6.34□□□□□ -1.39
HERC4-205ENST00000412272 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
HERC4-205ENST00000412272 DDX41Q9UJV9 622 aaKnown RBP6.34□□□□□ -1.39
HERC4-205ENST00000412272 PTPRKQ15262 1439 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 CASKIN1Q8WXD9 1431 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 CREBRFQ8IUR6 639 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 SLX1AQ9BQ83 275 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 CTNNA3Q9UI47 895 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 CYP2C19P33261 490 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 NASPP49321 788 aaPredicted RBP6.33□□□□□ -1.4
HERC4-205ENST00000412272 CHAF1AQ13111 956 aaPredicted RBP6.33□□□□□ -1.4
HERC4-205ENST00000412272 ZRSR2Q15696 482 aaKnown RBP6.33□□□□□ -1.4
HERC4-205ENST00000412272 KLHL23Q8NBE8 558 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 TEX13AQ9BXU3 409 aaPredicted RBP6.33□□□□□ -1.4
HERC4-205ENST00000412272 CHMP5Q9NZZ3 219 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 LAMC1P11047 1609 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 UHRF1BP1Q6BDS2 1440 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 CCDC196A0A1B0GTZ2 297 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 H0YHG0 523 aa6.33□□□□□ -1.4
HERC4-205ENST00000412272 SARNPP82979 210 aaKnown RBP6.33□□□□□ -1.4
HERC4-205ENST00000412272 SAMD9Q5K651 1589 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 TRIM66O15016 1216 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 ABCD1P33897 745 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 GET4Q7L5D6 327 aaPredicted RBP6.32□□□□□ -1.4
HERC4-205ENST00000412272 TBC1D32Q96NH3 1257 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 FAM53CQ9NYF3 392 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 MYBBP1AQ9BQG0 1328 aaKnown RBP6.32□□□□□ -1.4
HERC4-205ENST00000412272 MAPK8IP3Q9UPT6 1336 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 ANKRD18BA2A2Z9 1011 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 RAD21O60216 631 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 ECEL1O95672 775 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 RHBDL3P58872 404 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 MUM1L1Q5H9M0 696 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 KCNV2Q8TDN2 545 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 ERCC4Q92889 916 aaPredicted RBP6.32□□□□□ -1.4
HERC4-205ENST00000412272 CIZ1Q9ULV3 898 aaPredicted RBP6.32□□□□□ -1.4
HERC4-205ENST00000412272 SUPT6HQ7KZ85 1726 aaKnown RBP6.32□□□□□ -1.4
HERC4-205ENST00000412272 PARD3Q8TEW0 1356 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 CAMSAP2Q08AD1 1489 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 NAT1P18440 290 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 PAX3P23760 479 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 ATP6V1AP38606 617 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 NOLC1Q14978 699 aaKnown RBP eCLIP6.32□□□□□ -1.4
HERC4-205ENST00000412272 EVI5LQ96CN4 794 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 MTA3Q9BTC8 594 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 RANBP17Q9H2T7 1088 aaKnown RBP6.32□□□□□ -1.4
HERC4-205ENST00000412272 RAD54L2Q9Y4B4 1467 aa6.32□□□□□ -1.4
HERC4-205ENST00000412272 LRRIQ1Q96JM4 1722 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 MYO1CO00159 1063 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 ACRBPQ8NEB7 543 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 CRBNQ96SW2 442 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 REC8O95072 547 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 FGD5Q6ZNL6 1462 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 KIF27Q86VH2 1401 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 SPAG9O60271 1321 aaKnown RBP6.31□□□□□ -1.4
HERC4-205ENST00000412272 TTC19Q6DKK2 380 aaPredicted RBP6.31□□□□□ -1.4
HERC4-205ENST00000412272 FAXDC2Q96IV6 333 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 IRAK4Q9NWZ3 460 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 ABCC2Q92887 1545 aa6.31□□□□□ -1.4
HERC4-205ENST00000412272 CTIFO43310 598 aaKnown RBP6.3□□□□□ -1.4
HERC4-205ENST00000412272 HDGFL1Q5TGJ6 251 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 SUDS3Q9H7L9 328 aaPredicted RBP6.3□□□□□ -1.4
HERC4-205ENST00000412272 LCMT1Q9UIC8 334 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 RALGAPBQ86X10 1494 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 TESPA1A2RU30 521 aaPredicted RBP6.3□□□□□ -1.4
HERC4-205ENST00000412272 FOXD4Q12950 439 aaPredicted RBP6.3□□□□□ -1.4
HERC4-205ENST00000412272 ZNF280DQ6N043 979 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 SUGP1Q8IWZ8 645 aaKnown RBP6.3□□□□□ -1.4
HERC4-205ENST00000412272 ARPC5LQ9BPX5 153 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 ETAA1Q9NY74 926 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 FAM163AQ96GL9 167 aaPredicted RBP6.3□□□□□ -1.4
HERC4-205ENST00000412272 UGGT2Q9NYU1 1516 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 KANK1Q14678 1352 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 NPC1L1Q9UHC9 1359 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 TPD52L2O43399 206 aaKnown RBP6.3□□□□□ -1.4
HERC4-205ENST00000412272 ZNF445P59923 1031 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 SYT10Q6XYQ8 523 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 TRIM74Q86UV6 250 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 TRIM73Q86UV7 250 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 PACS2Q86VP3 889 aa6.3□□□□□ -1.4
HERC4-205ENST00000412272 C10orf67Q8IYJ2 551 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms