RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 KIF24Q5T7B8 1368 aa25.92■■□□□ 1.74
SUMO3-204ENST00000411651 IFT57Q9NWB7 429 aa25.92■■□□□ 1.74
SUMO3-204ENST00000411651 PEAK1Q9H792 1746 aa25.91■■□□□ 1.74
SUMO3-204ENST00000411651 HMOX1P09601 288 aa25.91■■□□□ 1.74
SUMO3-204ENST00000411651 RGPD8O14715 1765 aaPredicted RBP25.91■■□□□ 1.74
SUMO3-204ENST00000411651 KIF16BQ96L93 1317 aa25.91■■□□□ 1.74
SUMO3-204ENST00000411651 GNAI1P63096 354 aa25.9■■□□□ 1.74
SUMO3-204ENST00000411651 PMFBP1Q8TBY8 1022 aa25.9■■□□□ 1.74
SUMO3-204ENST00000411651 PIK3C2AO00443 1686 aa25.89■■□□□ 1.74
SUMO3-204ENST00000411651 ANP32AP39687 249 aaKnown RBP25.89■■□□□ 1.74
SUMO3-204ENST00000411651 EIF4A2Q14240 407 aaKnown RBP25.89■■□□□ 1.74
SUMO3-204ENST00000411651 MSH5O43196 834 aa25.88■■□□□ 1.73
SUMO3-204ENST00000411651 ZNF853P0CG23 659 aa25.88■■□□□ 1.73
SUMO3-204ENST00000411651 NGDNQ8NEJ9 315 aaKnown RBP25.88■■□□□ 1.73
SUMO3-204ENST00000411651 SMC4Q9NTJ3 1288 aa25.88■■□□□ 1.73
SUMO3-204ENST00000411651 SBNO1A3KN83 1393 aa25.88■■□□□ 1.73
SUMO3-204ENST00000411651 DLG5Q8TDM6 1919 aa25.88■■□□□ 1.73
SUMO3-204ENST00000411651 MVPQ14764 893 aaKnown RBP25.88■■□□□ 1.73
SUMO3-204ENST00000411651 ARHGEF10O15013 1369 aa25.87■■□□□ 1.73
SUMO3-204ENST00000411651 NUTM2FA1L443 756 aa25.87■■□□□ 1.73
SUMO3-204ENST00000411651 RLBP1P12271 317 aa25.87■■□□□ 1.73
SUMO3-204ENST00000411651 DZIP1LQ8IYY4 767 aaKnown RBP25.87■■□□□ 1.73
SUMO3-204ENST00000411651 SSH1Q8WYL5 1049 aa25.87■■□□□ 1.73
SUMO3-204ENST00000411651 FLT4P35916 1363 aa25.87■■□□□ 1.73
SUMO3-204ENST00000411651 MYT1Q01538 1121 aa25.86■■□□□ 1.73
SUMO3-204ENST00000411651 ANP32EQ9BTT0 268 aa25.86■■□□□ 1.73
SUMO3-204ENST00000411651 BCL2L13Q9BXK5 485 aa25.86■■□□□ 1.73
SUMO3-204ENST00000411651 IPO8O15397 1037 aaKnown RBP25.85■■□□□ 1.73
SUMO3-204ENST00000411651 ATF7IPQ6VMQ6 1270 aa25.84■■□□□ 1.73
SUMO3-204ENST00000411651 FTSJ3Q8IY81 847 aaKnown RBP25.84■■□□□ 1.73
SUMO3-204ENST00000411651 ADGRL3Q9HAR2 1447 aa25.83■■□□□ 1.73
SUMO3-204ENST00000411651 CFAP44Q96MT7 982 aa25.83■■□□□ 1.73
SUMO3-204ENST00000411651 MAP3K19Q56UN5 1328 aa25.81■■□□□ 1.72
SUMO3-204ENST00000411651 IGHDP01880 384 aa25.81■■□□□ 1.72
SUMO3-204ENST00000411651 TRIM27P14373 513 aa25.81■■□□□ 1.72
SUMO3-204ENST00000411651 DDX19BQ9UMR2 479 aa25.81■■□□□ 1.72
SUMO3-204ENST00000411651 NPHP4O75161 1426 aaPredicted RBP25.81■■□□□ 1.72
SUMO3-204ENST00000411651 KDRP35968 1356 aa25.81■■□□□ 1.72
SUMO3-204ENST00000411651 MARF1Q9Y4F3 1742 aaKnown RBP25.8■■□□□ 1.72
SUMO3-204ENST00000411651 NWD1Q149M9 1564 aa25.8■■□□□ 1.72
SUMO3-204ENST00000411651 ARHGAP45Q92619 1136 aa25.79■■□□□ 1.72
SUMO3-204ENST00000411651 SULT6B1Q6IMI4 303 aa25.78■■□□□ 1.72
SUMO3-204ENST00000411651 IPO9Q96P70 1041 aaKnown RBP25.78■■□□□ 1.72
SUMO3-204ENST00000411651 HSP90AB2PQ58FF8 381 aa25.78■■□□□ 1.72
SUMO3-204ENST00000411651 FAM161AQ3B820 660 aa25.77■■□□□ 1.72
SUMO3-204ENST00000411651 RWDD1Q9H446 243 aaPredicted RBP25.77■■□□□ 1.72
SUMO3-204ENST00000411651 TNNQ9UQP3 1299 aa25.77■■□□□ 1.72
SUMO3-204ENST00000411651 VAMP4O75379 141 aa25.76■■□□□ 1.72
SUMO3-204ENST00000411651 HAP1P54257 671 aaPredicted RBP25.76■■□□□ 1.72
SUMO3-204ENST00000411651 MBIPQ9NS73 344 aa25.76■■□□□ 1.71
SUMO3-204ENST00000411651 NOB1Q9ULX3 412 aaKnown RBP25.76■■□□□ 1.71
SUMO3-204ENST00000411651 RTL1A6NKG5 1358 aa25.75■■□□□ 1.71
SUMO3-204ENST00000411651 PCDHB15Q9Y5E8 787 aa25.75■■□□□ 1.71
SUMO3-204ENST00000411651 IGSF1Q8N6C5 1336 aa25.74■■□□□ 1.71
SUMO3-204ENST00000411651 AEBP1Q8IUX7 1158 aa25.74■■□□□ 1.71
SUMO3-204ENST00000411651 CHMP4BQ9H444 224 aaKnown RBP25.74■■□□□ 1.71
SUMO3-204ENST00000411651 PHF8Q9UPP1 1060 aa25.73■■□□□ 1.71
SUMO3-204ENST00000411651 NLRP6P59044 892 aa25.72■■□□□ 1.71
SUMO3-204ENST00000411651 HDAC1Q13547 482 aaPredicted RBP25.71■■□□□ 1.71
SUMO3-204ENST00000411651 THUMPD2Q9BTF0 503 aaKnown RBP25.71■■□□□ 1.71
SUMO3-204ENST00000411651 ERICH6Q7L0X2 663 aa25.71■■□□□ 1.71
SUMO3-204ENST00000411651 SKAP1Q86WV1 359 aa25.71■■□□□ 1.71
SUMO3-204ENST00000411651 NOP58Q9Y2X3 529 aaKnown RBP25.71■■□□□ 1.71
SUMO3-204ENST00000411651 LAS1LQ9Y4W2 734 aaKnown RBP25.71■■□□□ 1.71
SUMO3-204ENST00000411651 KIAA0232Q92628 1395 aa25.7■■□□□ 1.71
SUMO3-204ENST00000411651 AMPHP49418 695 aa25.7■■□□□ 1.7
SUMO3-204ENST00000411651 C8orf34Q49A92 452 aa25.7■■□□□ 1.7
SUMO3-204ENST00000411651 MRPL50Q8N5N7 158 aaKnown RBP25.7■■□□□ 1.7
SUMO3-204ENST00000411651 VIRMAQ69YN4 1812 aaKnown RBP25.7■■□□□ 1.7
SUMO3-204ENST00000411651 TWISTNBQ3B726 338 aaPredicted RBP25.69■■□□□ 1.7
SUMO3-204ENST00000411651 PHRF1Q9P1Y6 1649 aaKnown RBP25.68■■□□□ 1.7
SUMO3-204ENST00000411651 CHL1O00533 1208 aa25.67■■□□□ 1.7
SUMO3-204ENST00000411651 ITPRIPQ8IWB1 547 aa25.67■■□□□ 1.7
SUMO3-204ENST00000411651 TMEM57Q8N5G2 664 aa25.67■■□□□ 1.7
SUMO3-204ENST00000411651 ZBTB40Q9NUA8 1239 aa25.67■■□□□ 1.7
SUMO3-204ENST00000411651 HTATSF1O43719 755 aaKnown RBP25.66■■□□□ 1.7
SUMO3-204ENST00000411651 RGS3P49796 1198 aa25.66■■□□□ 1.7
SUMO3-204ENST00000411651 ABTB2Q8N961 1025 aa25.66■■□□□ 1.7
SUMO3-204ENST00000411651 GAS2L2Q8NHY3 880 aa25.66■■□□□ 1.7
SUMO3-204ENST00000411651 FAM83GA6ND36 823 aa25.65■■□□□ 1.7
SUMO3-204ENST00000411651 HOXC9P31274 260 aa25.65■■□□□ 1.7
SUMO3-204ENST00000411651 CRB1P82279 1406 aa25.65■■□□□ 1.7
SUMO3-204ENST00000411651 TSPYL6Q8N831 410 aa25.64■■□□□ 1.69
SUMO3-204ENST00000411651 NFAT5O94916 1531 aa25.64■■□□□ 1.69
SUMO3-204ENST00000411651 ABCC4O15439 1325 aa25.63■■□□□ 1.69
SUMO3-204ENST00000411651 EYA1Q99502 592 aa25.63■■□□□ 1.69
SUMO3-204ENST00000411651 LRRC37A3O60309 1634 aa25.62■■□□□ 1.69
SUMO3-204ENST00000411651 API5Q9BZZ5 524 aaKnown RBP25.62■■□□□ 1.69
SUMO3-204ENST00000411651 SOX12O15370 315 aa25.61■■□□□ 1.69
SUMO3-204ENST00000411651 C8orf58Q8NAV2 365 aa25.61■■□□□ 1.69
SUMO3-204ENST00000411651 DDRGK1Q96HY6 314 aa25.61■■□□□ 1.69
SUMO3-204ENST00000411651 ZBTB47Q9UFB7 747 aaPredicted RBP25.61■■□□□ 1.69
SUMO3-204ENST00000411651 KCNH5Q8NCM2 988 aa25.6■■□□□ 1.69
SUMO3-204ENST00000411651 DCTN1Q14203 1278 aa25.59■■□□□ 1.69
SUMO3-204ENST00000411651 KIF1AQ12756 1690 aa25.59■■□□□ 1.69
SUMO3-204ENST00000411651 LTN1O94822 1766 aa25.59■■□□□ 1.69
SUMO3-204ENST00000411651 SMC5Q8IY18 1101 aa25.59■■□□□ 1.69
SUMO3-204ENST00000411651 PDZRN3Q9UPQ7 1066 aa25.59■■□□□ 1.69
SUMO3-204ENST00000411651 MTHFSDQ2M296 383 aaKnown RBP25.58■■□□□ 1.69
SUMO3-204ENST00000411651 MST1RQ04912 1400 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms