RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 WWC2Q6AWC2 1192 aa6.21□□□□□ -1.41
R3HDM1-204ENST00000410054 VPS37AQ8NEZ2 397 aa6.21□□□□□ -1.41
R3HDM1-204ENST00000410054 CTNNBL1Q8WYA6 563 aaPredicted RBP6.21□□□□□ -1.41
R3HDM1-204ENST00000410054 GEMIN8Q9NWZ8 242 aaKnown RBP6.21□□□□□ -1.41
R3HDM1-204ENST00000410054 CHMP2AO43633 222 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 MS4A1P11836 297 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 MECOMQ03112 1051 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 SEPT6Q14141 434 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 MAP7D1Q3KQU3 841 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 IWS1Q96ST2 819 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 MTA3Q9BTC8 594 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 OFD1O75665 1012 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 DEUP1Q05D60 604 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 TBC1D31Q96DN5 1066 aa6.21□□□□□ -1.42
R3HDM1-204ENST00000410054 DESP17661 470 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 ABCD1P33897 745 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 COPB2P35606 906 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 TRAIPQ9BWF2 469 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 FAM107BQ9H098 131 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 NUB1Q9Y5A7 615 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 RIOK3O14730 519 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 PEX19P40855 299 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 ATL2Q8NHH9 583 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 BRMS1Q9HCU9 246 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 TRHP20396 242 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 FLIIQ13045 1269 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 GRM1Q13255 1194 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 TTC31Q49AM3 519 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 RPGRQ92834 1020 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 CLUAP1Q96AJ1 413 aa6.2□□□□□ -1.42
R3HDM1-204ENST00000410054 SMAPO00193 183 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 CTAGE5O15320 804 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 NAA16Q6N069 864 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 MIER1Q8N108 512 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 SEPT10Q9P0V9 454 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 ESPNB1AK53 854 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 IPO5O00410 1097 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 LMNB1P20700 586 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 FRAT1Q92837 279 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 NOL10Q9BSC4 688 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 YY1AP1Q9H869 796 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 GOLGA6L7A0A1B0GV03 622 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 NASPP49321 788 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 TPM4P67936 248 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 TMC1Q8TDI8 760 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 SEPT8Q92599 483 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 TANGO6Q9C0B7 1094 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 A0A1B0GUL7 405 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 U2SURPO15042 1029 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 FERP16591 822 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 MYSM1Q5VVJ2 828 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 MSL1Q68DK7 614 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 SLC4A10Q6U841 1118 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 PAGR1Q9BTK6 254 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 C6orf203Q9P0P8 240 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 KCNG1Q9UIX4 513 aa6.19□□□□□ -1.42
R3HDM1-204ENST00000410054 C11orf95C9JLR9 678 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 NEXNQ0ZGT2 675 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 IFFO2Q5TF58 517 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 GBP6Q6ZN66 633 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 UNC13AQ9UPW8 1703 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 RAB11FIP3O75154 756 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 FAM161AQ3B820 660 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 AMOTQ4VCS5 1084 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 ITPRIPQ8IWB1 547 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 PDCD7Q8N8D1 485 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 USP33Q8TEY7 942 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.18□□□□□ -1.426e-8■■■■■ 40
R3HDM1-204ENST00000410054 EPSTI1Q96J88 318 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 CDC5LQ99459 802 aaKnown RBP6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 UBA5Q9GZZ9 404 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 EVLQ9UI08 416 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 SERPINA10Q9UK55 444 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 MRFAP1Q9Y605 127 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 KIF16BQ96L93 1317 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 EGFL6Q8IUX8 553 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 SLKQ9H2G2 1235 aaPredicted RBP6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 TAOK3Q9H2K8 898 aa6.18□□□□□ -1.42
R3HDM1-204ENST00000410054 PPP1R12AO14974 1030 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 CRACR2AQ9BSW2 395 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 CENPHQ9H3R5 247 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 FBXO9Q9UK97 447 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 MAP4K4O95819 1239 aaPredicted RBP6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 BIRC3Q13489 604 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 RABEP1Q15276 862 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 CCDC125Q86Z20 511 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 LRRC43Q8N309 656 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 NCAPGQ9BPX3 1015 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 RSPH14Q9UHP6 348 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 MRE11P49959 708 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 HSP90AA5PQ58FG0 334 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 CCDC144CPQ8IYA2 1237 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 SREK1Q8WXA9 508 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 NEK1Q96PY6 1258 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 MYBPC2Q14324 1141 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 PSMD6Q15008 389 aa6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 SHQ1Q6PI26 577 aaKnown RBP6.17□□□□□ -1.42
R3HDM1-204ENST00000410054 RSPH9Q9H1X1 276 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms