RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 NFAT5O94916 1531 aa18.54■□□□□ 0.56
LIMS2-206ENST00000409754 TTC21AQ8NDW8 1320 aa18.54■□□□□ 0.56
LIMS2-206ENST00000409754 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
LIMS2-206ENST00000409754 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
LIMS2-206ENST00000409754 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
LIMS2-206ENST00000409754 NUTM2AQ8IVF1 878 aaPredicted RBP18.53■□□□□ 0.56
LIMS2-206ENST00000409754 RCAN3Q9UKA8 241 aa18.53■□□□□ 0.56
LIMS2-206ENST00000409754 PLEKHG5O94827 1062 aa18.52■□□□□ 0.56
LIMS2-206ENST00000409754 IRX6P78412 446 aaPredicted RBP18.52■□□□□ 0.56
LIMS2-206ENST00000409754 CDK12Q9NYV4 1490 aaPredicted RBP18.52■□□□□ 0.56
LIMS2-206ENST00000409754 PLCH1Q4KWH8 1693 aa18.52■□□□□ 0.56
LIMS2-206ENST00000409754 ABTB2Q8N961 1025 aa18.52■□□□□ 0.55
LIMS2-206ENST00000409754 MAP2P11137 1827 aaKnown RBP18.52■□□□□ 0.55
LIMS2-206ENST00000409754 USP31Q70CQ4 1352 aa18.52■□□□□ 0.55
LIMS2-206ENST00000409754 SLFN5Q08AF3 891 aa18.51■□□□□ 0.55
LIMS2-206ENST00000409754 DUSP27Q5VZP5 1158 aa18.51■□□□□ 0.55
LIMS2-206ENST00000409754 TCP11L2Q8N4U5 519 aa18.51■□□□□ 0.55
LIMS2-206ENST00000409754 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
LIMS2-206ENST00000409754 U2SURPO15042 1029 aaKnown RBP18.49■□□□□ 0.55
LIMS2-206ENST00000409754 CCDC27Q2M243 656 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
LIMS2-206ENST00000409754 LMO7Q8WWI1 1683 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 NRAPQ86VF7 1730 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 COL18A1P39060 1754 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 E9PSI1 815 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 ADAMTS2O95450 1211 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 FBLN1P23142 703 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 WWC1Q8IX03 1113 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
LIMS2-206ENST00000409754 RGS17Q9UGC6 210 aaPredicted RBP18.49■□□□□ 0.55
LIMS2-206ENST00000409754 EMILIN1Q9Y6C2 1016 aa18.49■□□□□ 0.55
LIMS2-206ENST00000409754 PLEKHF1Q96S99 279 aa18.48■□□□□ 0.55
LIMS2-206ENST00000409754 PPM1GO15355 546 aaPredicted RBP18.47■□□□□ 0.55
LIMS2-206ENST00000409754 NLRP6P59044 892 aa18.47■□□□□ 0.55
LIMS2-206ENST00000409754 RRP1P56182 461 aaKnown RBP18.46■□□□□ 0.55
LIMS2-206ENST00000409754 PPP4R2Q9NY27 417 aa18.46■□□□□ 0.55
LIMS2-206ENST00000409754 SLIT2O94813 1529 aa18.46■□□□□ 0.55
LIMS2-206ENST00000409754 LTN1O94822 1766 aa18.46■□□□□ 0.55
LIMS2-206ENST00000409754 COL14A1Q05707 1796 aaKnown RBP18.46■□□□□ 0.55
LIMS2-206ENST00000409754 PELP1Q8IZL8 1130 aaKnown RBP18.45■□□□□ 0.54
LIMS2-206ENST00000409754 KIAA0232Q92628 1395 aa18.45■□□□□ 0.54
LIMS2-206ENST00000409754 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.45■□□□□ 0.54
LIMS2-206ENST00000409754 NWD2Q9ULI1 1742 aa18.45■□□□□ 0.54
LIMS2-206ENST00000409754 FCHSD2O94868 740 aa18.45■□□□□ 0.54
LIMS2-206ENST00000409754 WDR63Q8IWG1 891 aa18.45■□□□□ 0.54
LIMS2-206ENST00000409754 BCL9LQ86UU0 1499 aa18.44■□□□□ 0.54
LIMS2-206ENST00000409754 IL13P35225 146 aa18.44■□□□□ 0.54
LIMS2-206ENST00000409754 RRS1Q15050 365 aaKnown RBP18.44■□□□□ 0.54
LIMS2-206ENST00000409754 RGPD5Q99666 1765 aa18.44■□□□□ 0.54
LIMS2-206ENST00000409754 GCP02774 474 aa18.43■□□□□ 0.54
LIMS2-206ENST00000409754 SPINK5Q9NQ38 1064 aaPredicted RBP18.43■□□□□ 0.54
LIMS2-206ENST00000409754 RRP7AQ9Y3A4 280 aaKnown RBP18.43■□□□□ 0.54
LIMS2-206ENST00000409754 MAPK8IP3Q9UPT6 1336 aa18.43■□□□□ 0.54
LIMS2-206ENST00000409754 CPDO75976 1380 aa18.43■□□□□ 0.54
LIMS2-206ENST00000409754 FAM83GA6ND36 823 aa18.42■□□□□ 0.54
LIMS2-206ENST00000409754 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
LIMS2-206ENST00000409754 C8orf37Q96NL8 207 aa18.42■□□□□ 0.54
LIMS2-206ENST00000409754 CAMTA1Q9Y6Y1 1673 aa18.42■□□□□ 0.54
LIMS2-206ENST00000409754 PEAK1Q9H792 1746 aa18.42■□□□□ 0.54
LIMS2-206ENST00000409754 AFF2P51816 1311 aa18.41■□□□□ 0.54
LIMS2-206ENST00000409754 TMPOP42166 694 aaKnown RBP18.41■□□□□ 0.54
LIMS2-206ENST00000409754 ZC3H6P61129 1189 aaKnown RBP18.41■□□□□ 0.54
LIMS2-206ENST00000409754 RSPH6AQ9H0K4 717 aa18.41■□□□□ 0.54
LIMS2-206ENST00000409754 CHRNA2Q15822 529 aa18.4■□□□□ 0.54
LIMS2-206ENST00000409754 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
LIMS2-206ENST00000409754 SOX12O15370 315 aa18.38■□□□□ 0.53
LIMS2-206ENST00000409754 MEX3CQ5U5Q3 659 aaKnown RBP18.38■□□□□ 0.53
LIMS2-206ENST00000409754 ARHGEF25Q86VW2 580 aa18.38■□□□□ 0.53
LIMS2-206ENST00000409754 NEFMP07197 916 aa18.37■□□□□ 0.53
LIMS2-206ENST00000409754 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
LIMS2-206ENST00000409754 HAP1P54257 671 aaPredicted RBP18.37■□□□□ 0.53
LIMS2-206ENST00000409754 POTEAQ6S8J7 498 aa18.37■□□□□ 0.53
LIMS2-206ENST00000409754 GLI3P10071 1580 aa18.36■□□□□ 0.53
LIMS2-206ENST00000409754 ABCC6O95255 1503 aa18.36■□□□□ 0.53
LIMS2-206ENST00000409754 NGLY1Q96IV0 654 aa18.36■□□□□ 0.53
LIMS2-206ENST00000409754 PRDM11Q9NQV5 511 aa18.36■□□□□ 0.53
LIMS2-206ENST00000409754 ATRNO75882 1429 aa18.36■□□□□ 0.53
LIMS2-206ENST00000409754 TRIM35Q9UPQ4 493 aa18.35■□□□□ 0.53
LIMS2-206ENST00000409754 AXIN2Q9Y2T1 843 aa18.35■□□□□ 0.53
LIMS2-206ENST00000409754 MAP3K19Q56UN5 1328 aa18.35■□□□□ 0.53
LIMS2-206ENST00000409754 COL5A2P05997 1499 aaPredicted RBP18.35■□□□□ 0.53
LIMS2-206ENST00000409754 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
LIMS2-206ENST00000409754 MYH16Q9H6N6 1097 aa18.34■□□□□ 0.53
LIMS2-206ENST00000409754 FLT4P35916 1363 aa18.34■□□□□ 0.53
LIMS2-206ENST00000409754 IL16Q14005 1332 aa18.34■□□□□ 0.53
LIMS2-206ENST00000409754 HMOX1P09601 288 aa18.34■□□□□ 0.53
LIMS2-206ENST00000409754 RIPK4P57078 832 aa18.34■□□□□ 0.53
LIMS2-206ENST00000409754 KIF24Q5T7B8 1368 aa18.33■□□□□ 0.53
LIMS2-206ENST00000409754 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.52
LIMS2-206ENST00000409754 NFE2L2Q16236 605 aa18.32■□□□□ 0.52
LIMS2-206ENST00000409754 BTG4Q9NY30 223 aa18.32■□□□□ 0.52
LIMS2-206ENST00000409754 HSP90AB2PQ58FF8 381 aa18.31■□□□□ 0.52
LIMS2-206ENST00000409754 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
LIMS2-206ENST00000409754 USP21Q9UK80 565 aa18.31■□□□□ 0.52
LIMS2-206ENST00000409754 RGPD1P0DJD0 1748 aa18.3■□□□□ 0.52
LIMS2-206ENST00000409754 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
LIMS2-206ENST00000409754 PLIN1O60240 522 aa18.3■□□□□ 0.52
LIMS2-206ENST00000409754 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
LIMS2-206ENST00000409754 PHACTR3Q96KR7 559 aa18.3■□□□□ 0.52
LIMS2-206ENST00000409754 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms