RNA–Protein interactions for RNA: ENST00000409460.5

VWA3B-201, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 4,844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-201ENST00000409460 WDR17Q8IZU2 1322 aa12.03□□□□□ -0.48
VWA3B-201ENST00000409460 CARD10Q9BWT7 1032 aa12.03□□□□□ -0.48
VWA3B-201ENST00000409460 SMG6Q86US8 1419 aaKnown RBP12.03□□□□□ -0.48
VWA3B-201ENST00000409460 FAM182BQ5T319 152 aa12.03□□□□□ -0.48
VWA3B-201ENST00000409460 SIN3AQ96ST3 1273 aa12.03□□□□□ -0.48
VWA3B-201ENST00000409460 NINLQ9Y2I6 1382 aa12.03□□□□□ -0.48
VWA3B-201ENST00000409460 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
VWA3B-201ENST00000409460 MARF1Q9Y4F3 1742 aaKnown RBP12.02□□□□□ -0.48
VWA3B-201ENST00000409460 USP6P35125 1406 aa12.02□□□□□ -0.49
VWA3B-201ENST00000409460 RAPGEF4Q8WZA2 1011 aa12.02□□□□□ -0.49
VWA3B-201ENST00000409460 PUS7Q96PZ0 661 aaKnown RBP12.02□□□□□ -0.49
VWA3B-201ENST00000409460 IL2RBP14784 551 aa12.02□□□□□ -0.49
VWA3B-201ENST00000409460 GLI3P10071 1580 aa12.01□□□□□ -0.49
VWA3B-201ENST00000409460 MSH5O43196 834 aa12.01□□□□□ -0.49
VWA3B-201ENST00000409460 KLHL34Q8N239 644 aa12□□□□□ -0.49
VWA3B-201ENST00000409460 LTV1Q96GA3 475 aaPredicted RBP12□□□□□ -0.49
VWA3B-201ENST00000409460 KCNQ2O43526 872 aa12□□□□□ -0.49
VWA3B-201ENST00000409460 SYTL4Q96C24 671 aaPredicted RBP12□□□□□ -0.49
VWA3B-201ENST00000409460 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
VWA3B-201ENST00000409460 KIAA1210Q9ULL0 1709 aa11.99□□□□□ -0.49
VWA3B-201ENST00000409460 PLCH1Q4KWH8 1693 aa11.98□□□□□ -0.49
VWA3B-201ENST00000409460 TATP17735 454 aaPredicted RBP11.98□□□□□ -0.49
VWA3B-201ENST00000409460 ARHGEF25Q86VW2 580 aa11.98□□□□□ -0.49
VWA3B-201ENST00000409460 CCDC136Q96JN2 1154 aa11.98□□□□□ -0.49
VWA3B-201ENST00000409460 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
VWA3B-201ENST00000409460 PLSCR1O15162 318 aa11.97□□□□□ -0.49
VWA3B-201ENST00000409460 CAMKK2Q96RR4 588 aa11.97□□□□□ -0.49
VWA3B-201ENST00000409460 YY1P25490 414 aa11.97□□□□□ -0.49
VWA3B-201ENST00000409460 DISP2A7MBM2 1401 aa11.96□□□□□ -0.49
VWA3B-201ENST00000409460 DDX54Q8TDD1 881 aaKnown RBP11.96□□□□□ -0.49
VWA3B-201ENST00000409460 RGPD1P0DJD0 1748 aa11.96□□□□□ -0.5
VWA3B-201ENST00000409460 CPSF1Q10570 1443 aaKnown RBP11.95□□□□□ -0.5
VWA3B-201ENST00000409460 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
VWA3B-201ENST00000409460 TIMELESSQ9UNS1 1208 aa11.94□□□□□ -0.5
VWA3B-201ENST00000409460 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
VWA3B-201ENST00000409460 TRPM1Q7Z4N2 1603 aa11.93□□□□□ -0.5
VWA3B-201ENST00000409460 ARHGEF28Q8N1W1 1705 aaKnown RBP11.93□□□□□ -0.5
VWA3B-201ENST00000409460 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
VWA3B-201ENST00000409460 SALL2Q9Y467 1007 aaPredicted RBP11.93□□□□□ -0.5
VWA3B-201ENST00000409460 COL5A2P05997 1499 aaPredicted RBP11.93□□□□□ -0.5
VWA3B-201ENST00000409460 FLAD1Q8NFF5 587 aa11.93□□□□□ -0.5
VWA3B-201ENST00000409460 CGNL1Q0VF96 1302 aa11.92□□□□□ -0.5
VWA3B-201ENST00000409460 NME9Q86XW9 330 aa11.92□□□□□ -0.5
VWA3B-201ENST00000409460 SLC16A10Q8TF71 515 aa11.92□□□□□ -0.5
VWA3B-201ENST00000409460 SMARCC1Q92922 1105 aaPredicted RBP11.92□□□□□ -0.5
VWA3B-201ENST00000409460 ACSBG1Q96GR2 724 aa11.92□□□□□ -0.5
VWA3B-201ENST00000409460 GPR162Q16538 588 aa11.92□□□□□ -0.5
VWA3B-201ENST00000409460 IP6K1Q92551 441 aa11.92□□□□□ -0.5
VWA3B-201ENST00000409460 PPM1GO15355 546 aaPredicted RBP11.92□□□□□ -0.5
VWA3B-201ENST00000409460 SLC27A3Q5K4L6 730 aa11.92□□□□□ -0.5
VWA3B-201ENST00000409460 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
VWA3B-201ENST00000409460 TFCP2L1Q9NZI6 479 aa11.91□□□□□ -0.5
VWA3B-201ENST00000409460 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
VWA3B-201ENST00000409460 ZCRB1Q8TBF4 217 aaKnown RBP11.91□□□□□ -0.5
VWA3B-201ENST00000409460 SLC12A5Q9H2X9 1139 aa11.91□□□□□ -0.5
VWA3B-201ENST00000409460 ALS2Q96Q42 1657 aa11.91□□□□□ -0.5
VWA3B-201ENST00000409460 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
VWA3B-201ENST00000409460 TRPM3Q9HCF6 1732 aaPredicted RBP11.9□□□□□ -0.5
VWA3B-201ENST00000409460 SLC15A2Q16348 729 aa11.9□□□□□ -0.51
VWA3B-201ENST00000409460 CCER1Q8TC90 406 aaPredicted RBP11.9□□□□□ -0.51
VWA3B-201ENST00000409460 USP31Q70CQ4 1352 aa11.89□□□□□ -0.51
VWA3B-201ENST00000409460 ATF5Q9Y2D1 282 aaPredicted RBP11.89□□□□□ -0.51
VWA3B-201ENST00000409460 ST20-MTHFSA0A0A6YYL1 179 aa11.89□□□□□ -0.51
VWA3B-201ENST00000409460 NPM2Q86SE8 214 aaKnown RBP11.89□□□□□ -0.51
VWA3B-201ENST00000409460 UBE2Q2Q8WVN8 375 aa11.89□□□□□ -0.51
VWA3B-201ENST00000409460 QRICH2Q9H0J4 1663 aa11.89□□□□□ -0.51
VWA3B-201ENST00000409460 ZBTB7AO95365 584 aa11.88□□□□□ -0.51
VWA3B-201ENST00000409460 ERBB3P21860 1342 aa11.88□□□□□ -0.51
VWA3B-201ENST00000409460 USP47Q96K76 1375 aa11.88□□□□□ -0.51
VWA3B-201ENST00000409460 CAMTA1Q9Y6Y1 1673 aa11.88□□□□□ -0.51
VWA3B-201ENST00000409460 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
VWA3B-201ENST00000409460 ARXQ96QS3 562 aa11.87□□□□□ -0.51
VWA3B-201ENST00000409460 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
VWA3B-201ENST00000409460 CLSPNQ9HAW4 1339 aa11.87□□□□□ -0.51
VWA3B-201ENST00000409460 NRKQ7Z2Y5 1582 aa11.86□□□□□ -0.51
VWA3B-201ENST00000409460 HSP90AB1P08238 724 aaKnown RBP11.86□□□□□ -0.51
VWA3B-201ENST00000409460 AK7Q96M32 723 aa11.86□□□□□ -0.51
VWA3B-201ENST00000409460 CCNL1Q9UK58 526 aaPredicted RBP11.86□□□□□ -0.51
VWA3B-201ENST00000409460 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
VWA3B-201ENST00000409460 PHRF1Q9P1Y6 1649 aaKnown RBP11.86□□□□□ -0.51
VWA3B-201ENST00000409460 TNS2Q63HR2 1409 aa11.86□□□□□ -0.51
VWA3B-201ENST00000409460 RTL1A6NKG5 1358 aa11.86□□□□□ -0.51
VWA3B-201ENST00000409460 GRIN3BO60391 1043 aa11.86□□□□□ -0.51
VWA3B-201ENST00000409460 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
VWA3B-201ENST00000409460 NRAPQ86VF7 1730 aa11.85□□□□□ -0.51
VWA3B-201ENST00000409460 ABCC6O95255 1503 aa11.85□□□□□ -0.51
VWA3B-201ENST00000409460 PCDH11XQ9BZA7 1347 aa11.85□□□□□ -0.51
VWA3B-201ENST00000409460 PCDH11YQ9BZA8 1340 aa11.85□□□□□ -0.51
VWA3B-201ENST00000409460 EIF4G2P78344 907 aaKnown RBP eCLIP11.85□□□□□ -0.51
VWA3B-201ENST00000409460 SLIT3O75094 1523 aa11.84□□□□□ -0.51
VWA3B-201ENST00000409460 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
VWA3B-201ENST00000409460 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
VWA3B-201ENST00000409460 GGNBP2Q9H3C7 697 aa11.83□□□□□ -0.52
VWA3B-201ENST00000409460 LRP5O75197 1615 aa11.83□□□□□ -0.52
VWA3B-201ENST00000409460 AXIN2Q9Y2T1 843 aa11.83□□□□□ -0.52
VWA3B-201ENST00000409460 HOXC9P31274 260 aa11.83□□□□□ -0.52
VWA3B-201ENST00000409460 BRWD3Q6RI45 1802 aa11.82□□□□□ -0.52
VWA3B-201ENST00000409460 A0A1W2PP64 1363 aa11.82□□□□□ -0.52
VWA3B-201ENST00000409460 C1orf141Q5JVX7 400 aa11.82□□□□□ -0.52
VWA3B-201ENST00000409460 KNSTRNQ9Y448 316 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms