RNA–Protein interactions for RNA: ENST00000409114.7

PBRM1-206, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-206ENST00000409114 USP21Q9UK80 565 aa10.1□□□□□ -0.79
PBRM1-206ENST00000409114 ARHGEF10O15013 1369 aa10.1□□□□□ -0.79
PBRM1-206ENST00000409114 MAGI2Q86UL8 1455 aa10.1□□□□□ -0.79
PBRM1-206ENST00000409114 TTLL12Q14166 644 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-206ENST00000409114 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 CNKSR2Q8WXI2 1034 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 IL2RBP14784 551 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 RALYLQ86SE5 291 aaKnown RBP10.09□□□□□ -0.79
PBRM1-206ENST00000409114 TCP11L2Q8N4U5 519 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 SLF2Q8IX21 1173 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 BCL2L13Q9BXK5 485 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 SRCIN1Q9C0H9 1055 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 NAIPQ13075 1403 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 TWISTNBQ3B726 338 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-206ENST00000409114 ZSCAN25Q6NSZ9 544 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 PPP1R42Q7Z4L9 355 aa10.09□□□□□ -0.79
PBRM1-206ENST00000409114 ZSCAN29Q8IWY8 852 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-206ENST00000409114 IPO9Q96P70 1041 aaKnown RBP10.09□□□□□ -0.79
PBRM1-206ENST00000409114 TCERG1O14776 1098 aaKnown RBP10.08□□□□□ -0.8
PBRM1-206ENST00000409114 ANKRD45Q5TZF3 282 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 RPRD2Q5VT52 1461 aaKnown RBP10.08□□□□□ -0.8
PBRM1-206ENST00000409114 FANCIQ9NVI1 1328 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 CPLX1O14810 134 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 CCT4P50991 539 aaKnown RBP10.08□□□□□ -0.8
PBRM1-206ENST00000409114 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 TRPM2O94759 1503 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 PPP2R1AP30153 589 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 NACAP1Q9BZK3 213 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 FYB1O15117 783 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 NFXL1Q6ZNB6 911 aa10.08□□□□□ -0.8
PBRM1-206ENST00000409114 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 ZNF622Q969S3 477 aaKnown RBP eCLIP10.07□□□□□ -0.83e-6■■■■□ 24.4
PBRM1-206ENST00000409114 CEP126Q9P2H0 1117 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 ST18O60284 1047 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 CAVIN4Q5BKX8 364 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 WWC2Q6AWC2 1192 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 NME9Q86XW9 330 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 TRPC5Q9UL62 973 aaPredicted RBP10.07□□□□□ -0.8
PBRM1-206ENST00000409114 NSD2O96028 1365 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 TAF7Q15545 349 aaPredicted RBP10.07□□□□□ -0.8
PBRM1-206ENST00000409114 FAM184AQ8NB25 1140 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 BRD4O60885 1362 aaPredicted RBP10.07□□□□□ -0.8
PBRM1-206ENST00000409114 LARP1Q6PKG0 1096 aaKnown RBP10.07□□□□□ -0.8
PBRM1-206ENST00000409114 ANKIB1Q9P2G1 1089 aa10.07□□□□□ -0.8
PBRM1-206ENST00000409114 R3HCC1Q9Y3T6 440 aaKnown RBP10.07□□□□□ -0.8
PBRM1-206ENST00000409114 NSD3Q9BZ95 1437 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 CT47B1P0C2W7 299 aaPredicted RBP10.06□□□□□ -0.8
PBRM1-206ENST00000409114 MSNP26038 577 aaKnown RBP10.06□□□□□ -0.8
PBRM1-206ENST00000409114 RXRBP28702 533 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 DDX46Q7L014 1031 aaKnown RBP10.06□□□□□ -0.8
PBRM1-206ENST00000409114 CCDC47Q96A33 483 aaKnown RBP10.06□□□□□ -0.8
PBRM1-206ENST00000409114 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 PBRM1Q86U86 1689 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 HIP1O00291 1037 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 REC8O95072 547 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 PHF14O94880 888 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 TPM4P67936 248 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 SF3A1Q15459 793 aaKnown RBP10.06□□□□□ -0.8
PBRM1-206ENST00000409114 ZNF287Q9HBT7 754 aa10.06□□□□□ -0.8
PBRM1-206ENST00000409114 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
PBRM1-206ENST00000409114 MYO1BO43795 1136 aa10.05□□□□□ -0.8
PBRM1-206ENST00000409114 XBP1P17861 261 aa10.05□□□□□ -0.8
PBRM1-206ENST00000409114 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
PBRM1-206ENST00000409114 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
PBRM1-206ENST00000409114 NF2P35240 595 aa10.05□□□□□ -0.8
PBRM1-206ENST00000409114 NFE2L2Q16236 605 aa10.05□□□□□ -0.8
PBRM1-206ENST00000409114 AMER1Q5JTC6 1135 aaPredicted RBP10.05□□□□□ -0.8
PBRM1-206ENST00000409114 CDC5LQ99459 802 aaKnown RBP10.05□□□□□ -0.8
PBRM1-206ENST00000409114 BTG4Q9NY30 223 aa10.05□□□□□ -0.8
PBRM1-206ENST00000409114 SCAF11Q99590 1463 aaKnown RBP10.05□□□□□ -0.8
PBRM1-206ENST00000409114 CTTNBP2Q8WZ74 1663 aa10.05□□□□□ -0.8
PBRM1-206ENST00000409114 ATF7IPQ6VMQ6 1270 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 TRMT112Q9UI30 125 aaKnown RBP10.04□□□□□ -0.8
PBRM1-206ENST00000409114 CLEC11AQ9Y240 323 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 GNAI2P04899 355 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 PTMSP20962 102 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 NBPF6Q5VWK0 638 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 NBPF5PQ86XG9 351 aaPredicted RBP10.04□□□□□ -0.8
PBRM1-206ENST00000409114 JDP2Q8WYK2 163 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 NBPF4Q96M43 638 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 SETDB2Q96T68 719 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 H3BQV1 296 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 SURF6O75683 361 aaKnown RBP10.04□□□□□ -0.8
PBRM1-206ENST00000409114 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 BRMS1Q9HCU9 246 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 C6orf229H3BNL8 230 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 SAFBQ15424 915 aaKnown RBP eCLIP10.04□□□□□ -0.8
PBRM1-206ENST00000409114 FLAD1Q8NFF5 587 aa10.04□□□□□ -0.8
PBRM1-206ENST00000409114 NYXQ9GZU5 481 aa10.03□□□□□ -0.8
PBRM1-206ENST00000409114 AKAP2Q9Y2D5 859 aa10.03□□□□□ -0.8
PBRM1-206ENST00000409114 PODXL2Q9NZ53 605 aa10.03□□□□□ -0.8
PBRM1-206ENST00000409114 HDAC9Q9UKV0 1011 aa10.03□□□□□ -0.8
PBRM1-206ENST00000409114 LMOD1P29536 600 aaPredicted RBP10.03□□□□□ -0.8
PBRM1-206ENST00000409114 HYPKQ9NX55 129 aa10.03□□□□□ -0.8
PBRM1-206ENST00000409114 YEATS2Q9ULM3 1422 aa10.03□□□□□ -0.8
PBRM1-206ENST00000409114 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.8
PBRM1-206ENST00000409114 CEP89Q96ST8 783 aa10.02□□□□□ -0.81
PBRM1-206ENST00000409114 PLCB2Q00722 1185 aa10.02□□□□□ -0.81
PBRM1-206ENST00000409114 WDR63Q8IWG1 891 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms