RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 DUOX2Q9NRD8 1548 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 PRKAR2BP31323 418 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 CFAP74Q9C0B2 1584 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 ATAD2Q6PL18 1390 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 HTATSF1O43719 755 aaKnown RBP4.66□□□□□ -1.66
RGPD4-201ENST00000408999 CLSTN1O94985 981 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 ATP10BO94823 1461 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 WDR7Q9Y4E6 1490 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 KDM5DQ9BY66 1539 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 VGLL3A8MV65 326 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 TOMM22Q9NS69 142 aa4.66□□□□□ -1.66
RGPD4-201ENST00000408999 ASXL2Q76L83 1435 aa4.65□□□□□ -1.66
RGPD4-201ENST00000408999 GLIPR1L2Q4G1C9 344 aa4.65□□□□□ -1.66
RGPD4-201ENST00000408999 ANKLE2Q86XL3 938 aa4.65□□□□□ -1.66
RGPD4-201ENST00000408999 TCP11L2Q8N4U5 519 aa4.65□□□□□ -1.66
RGPD4-201ENST00000408999 GAS2L2Q8NHY3 880 aa4.65□□□□□ -1.66
RGPD4-201ENST00000408999 NAP1L5Q96NT1 182 aaPredicted RBP4.65□□□□□ -1.66
RGPD4-201ENST00000408999 IFIT2P09913 472 aaKnown RBP4.65□□□□□ -1.66
RGPD4-201ENST00000408999 AIMP1Q12904 312 aaKnown RBP4.65□□□□□ -1.66
RGPD4-201ENST00000408999 FOXD4L5Q5VV16 416 aaPredicted RBP4.65□□□□□ -1.66
RGPD4-201ENST00000408999 FOXD4L4Q8WXT5 416 aaPredicted RBP4.65□□□□□ -1.66
RGPD4-201ENST00000408999 DIAPH3Q9NSV4 1193 aa4.65□□□□□ -1.66
RGPD4-201ENST00000408999 NOS1P29475 1434 aa4.65□□□□□ -1.67
RGPD4-201ENST00000408999 EP400NLQ6ZTU2 488 aa4.65□□□□□ -1.67
RGPD4-201ENST00000408999 RIC3Q7Z5B4 369 aa4.65□□□□□ -1.67
RGPD4-201ENST00000408999 SYAP1Q96A49 352 aaPredicted RBP4.65□□□□□ -1.67
RGPD4-201ENST00000408999 SLC26A8Q96RN1 970 aa4.65□□□□□ -1.67
RGPD4-201ENST00000408999 PLCH2O75038 1416 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 PSEN1P49768 467 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 NAA30Q147X3 362 aaPredicted RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 CSPP1Q1MSJ5 1256 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 PLEKHO1Q53GL0 409 aaPredicted RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 TCOF1Q13428 1488 aaKnown RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 NRDCO43847 1150 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 IGHDP01880 384 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 MSNP26038 577 aaKnown RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 ANO2Q9NQ90 1003 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 RPRD2Q5VT52 1461 aaKnown RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 RRS1Q15050 365 aaKnown RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 VSIG10Q8N0Z9 540 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 EXOSC9Q06265 439 aaKnown RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 G3BP1Q13283 466 aaKnown RBP eCLIP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 CCDC30Q5VVM6 783 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 TSR2Q969E8 191 aaKnown RBP4.64□□□□□ -1.67
RGPD4-201ENST00000408999 STRN4Q9NRL3 753 aa4.64□□□□□ -1.67
RGPD4-201ENST00000408999 NOB1Q9ULX3 412 aaKnown RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 SCAF11Q99590 1463 aaKnown RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 PKP1Q13835 747 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 FBXO31Q5XUX0 539 aaPredicted RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 ADGRF5Q8IZF2 1346 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 FAM177BA6PVY3 158 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 UBTFL1P0CB47 393 aaPredicted RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 TWISTNBQ3B726 338 aaPredicted RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 SULT6B1Q6IMI4 303 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 WAPLQ7Z5K2 1190 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 RNF17Q9BXT8 1623 aaKnown RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 CEP170Q5SW79 1584 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 XPCQ01831 940 aaPredicted RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 RUFY2Q8WXA3 655 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 FBXW7Q969H0 707 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 NUDT16Q96DE0 195 aaKnown RBP4.63□□□□□ -1.67
RGPD4-201ENST00000408999 SIRT1Q96EB6 747 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 USP35Q9P2H5 1018 aa4.63□□□□□ -1.67
RGPD4-201ENST00000408999 H3BQV1 296 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 TATP17735 454 aaPredicted RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 IFFO2Q5TF58 517 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 CHD9Q3L8U1 2897 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 ZNF518AQ6AHZ1 1483 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 DNMT1P26358 1616 aaKnown RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 EIF2AK4Q9P2K8 1649 aaKnown RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 GOLGA6L3A6NEY3 463 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 DDX11L8A8MPP1 907 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 CHAF1AQ13111 956 aaPredicted RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 KIF6Q6ZMV9 814 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 C1orf115Q9H7X2 142 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 DISP3Q9P2K9 1392 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 IGSF3O75054 1194 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 REC8O95072 547 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 TPM4P67936 248 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 NBPF6Q5VWK0 638 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 INTS3Q68E01 1043 aaKnown RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 VPS37DQ86XT2 251 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 NBPF4Q96M43 638 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 LNPKQ9C0E8 428 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 RNF216Q9NWF9 866 aaPredicted RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 PLA2R1Q13018 1463 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 NINLQ9Y2I6 1382 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 ABCC2Q92887 1545 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 LRRFIP1Q32MZ4 808 aaKnown RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 HSP90AB4PQ58FF6 505 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 NOL10Q9BSC4 688 aaKnown RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 RBM42Q9BTD8 480 aaKnown RBP4.62□□□□□ -1.67
RGPD4-201ENST00000408999 BCAR3O75815 825 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 FAM163BP0C2L3 166 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 RASSF8Q8NHQ8 419 aa4.62□□□□□ -1.67
RGPD4-201ENST00000408999 SHANK2Q9UPX8 1470 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 ERC2O15083 957 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 AMOTL1Q8IY63 956 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 FAM184AQ8NB25 1140 aa4.61□□□□□ -1.67
RGPD4-201ENST00000408999 ATG3Q9NT62 314 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms