RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
LTBP1-204ENST00000407925 PRKAR2BP31323 418 aa12.7□□□□□ -0.38
LTBP1-204ENST00000407925 RNF214Q8ND24 703 aa12.7□□□□□ -0.38
LTBP1-204ENST00000407925 PPP6R1Q9UPN7 881 aa12.7□□□□□ -0.38
LTBP1-204ENST00000407925 TNMDQ9H2S6 317 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
LTBP1-204ENST00000407925 CABP2Q9NPB3 220 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 PDZRN3Q9UPQ7 1066 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 KIF2AO00139 706 aaPredicted RBP12.69□□□□□ -0.38
LTBP1-204ENST00000407925 FAM69CQ0P6D2 419 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 CEP57L1Q8IYX8 460 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 FBXO3Q9UK99 471 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 SMTNL1A8MU46 457 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 ATP2B1P20020 1258 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 PPP2R1AP30153 589 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 CCDC112Q8NEF3 446 aa12.69□□□□□ -0.38
LTBP1-204ENST00000407925 FIBPO43427 364 aa12.68□□□□□ -0.38
LTBP1-204ENST00000407925 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
LTBP1-204ENST00000407925 CETN2P41208 172 aa12.68□□□□□ -0.38
LTBP1-204ENST00000407925 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 FMNL2Q96PY5 1086 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 CEP131Q9UPN4 1083 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 K7ELQ4 463 aaPredicted RBP12.67□□□□□ -0.38
LTBP1-204ENST00000407925 ME1P48163 572 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 THEMISQ8N1K5 641 aaPredicted RBP12.67□□□□□ -0.38
LTBP1-204ENST00000407925 PDCL2Q8N4E4 241 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 ZNF287Q9HBT7 754 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 BLOC1S2Q6QNY1 142 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 GBP3Q9H0R5 595 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 INCENPQ9NQS7 918 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 SLC52A1Q9NWF4 448 aa12.67□□□□□ -0.38
LTBP1-204ENST00000407925 BRPF1P55201 1214 aaPredicted RBP12.66□□□□□ -0.38
LTBP1-204ENST00000407925 RPAP2Q8IXW5 612 aaPredicted RBP12.66□□□□□ -0.38
LTBP1-204ENST00000407925 RPGRIP1LQ68CZ1 1315 aa12.66□□□□□ -0.38
LTBP1-204ENST00000407925 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
LTBP1-204ENST00000407925 MPHOSPH8Q99549 860 aa12.66□□□□□ -0.38
LTBP1-204ENST00000407925 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
LTBP1-204ENST00000407925 CABP4P57796 275 aa12.66□□□□□ -0.38
LTBP1-204ENST00000407925 JAKMIP3Q5VZ66 844 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.38
LTBP1-204ENST00000407925 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 UBAC1Q9BSL1 405 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 MTMR7Q9Y216 660 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 CASKIN1Q8WXD9 1431 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 WIZO95785 1651 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 PPP1R12BO60237 982 aaPredicted RBP12.65□□□□□ -0.38
LTBP1-204ENST00000407925 CEP126Q9P2H0 1117 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 PROSER2Q86WR7 435 aaPredicted RBP12.65□□□□□ -0.38
LTBP1-204ENST00000407925 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 TANGO6Q9C0B7 1094 aa12.65□□□□□ -0.38
LTBP1-204ENST00000407925 ATAD2Q6PL18 1390 aa12.65□□□□□ -0.39
LTBP1-204ENST00000407925 TXNDC2Q86VQ3 553 aa12.64□□□□□ -0.39
LTBP1-204ENST00000407925 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
LTBP1-204ENST00000407925 TAF4BQ92750 862 aa12.64□□□□□ -0.39
LTBP1-204ENST00000407925 IGF1RP08069 1367 aa12.64□□□□□ -0.39
LTBP1-204ENST00000407925 GBP2P32456 591 aaPredicted RBP12.64□□□□□ -0.39
LTBP1-204ENST00000407925 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
LTBP1-204ENST00000407925 SF3B2Q13435 895 aaKnown RBP12.64□□□□□ -0.39
LTBP1-204ENST00000407925 ESCO1Q5FWF5 840 aa12.64□□□□□ -0.39
LTBP1-204ENST00000407925 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
LTBP1-204ENST00000407925 LRRC9Q6ZRR7 1453 aa12.63□□□□□ -0.39
LTBP1-204ENST00000407925 ZNF530Q6P9A1 599 aaPredicted RBP12.63□□□□□ -0.39
LTBP1-204ENST00000407925 ZNF397Q8NF99 534 aaPredicted RBP12.63□□□□□ -0.39
LTBP1-204ENST00000407925 SYNJ2O15056 1496 aa12.63□□□□□ -0.39
LTBP1-204ENST00000407925 NUP62CLQ9H1M0 184 aa12.62□□□□□ -0.39
LTBP1-204ENST00000407925 PHAXQ9H814 394 aaKnown RBP12.62□□□□□ -0.39
LTBP1-204ENST00000407925 NOB1Q9ULX3 412 aaKnown RBP12.62□□□□□ -0.39
LTBP1-204ENST00000407925 ENOX2Q16206 610 aaKnown RBP12.62□□□□□ -0.39
LTBP1-204ENST00000407925 IMMTQ16891 758 aaKnown RBP12.62□□□□□ -0.39
LTBP1-204ENST00000407925 MCM3P25205 808 aa12.62□□□□□ -0.39
LTBP1-204ENST00000407925 MVPQ14764 893 aaKnown RBP12.62□□□□□ -0.39
LTBP1-204ENST00000407925 ARHGAP5Q13017 1502 aa12.62□□□□□ -0.39
LTBP1-204ENST00000407925 UPF3BQ9BZI7 483 aaKnown RBP12.61□□□□□ -0.39
LTBP1-204ENST00000407925 PDRG1Q9NUG6 133 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 TMOD2Q9NZR1 351 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 SMARCA4P51532 1647 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 ANKRD62A6NC57 917 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 EPB41L2O43491 1005 aaKnown RBP12.61□□□□□ -0.39
LTBP1-204ENST00000407925 TNIP1Q15025 636 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 CCDC148Q8NFR7 591 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 NCOA2Q15596 1464 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 CCDC196A0A1B0GTZ2 297 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 FCHSD2O94868 740 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 KIF20AO95235 890 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 CFAP70Q5T0N1 1121 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 ZHX3Q9H4I2 956 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 ANKRD30BQ9BXX2 1392 aa12.61□□□□□ -0.39
LTBP1-204ENST00000407925 FGD5Q6ZNL6 1462 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 TDO2P48775 406 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 AKAP2Q9Y2D5 859 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 FGFR1OPO95684 399 aaKnown RBP12.6□□□□□ -0.39
LTBP1-204ENST00000407925 CCDC91Q7Z6B0 441 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 KIF21BO75037 1637 aa12.6□□□□□ -0.39
LTBP1-204ENST00000407925 MPHOSPH10O00566 681 aaKnown RBP12.59□□□□□ -0.39
LTBP1-204ENST00000407925 RAB11FIP3O75154 756 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms