RNA–Protein interactions for RNA: ENST00000407817.3

TCN2-203, Transcript of transcobalamin 2, humanhuman

TSL 1 (best) BASIC

Gene TCN2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-203ENST00000407817 NPHP3Q7Z494 1330 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 SLIT3O75094 1523 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 NFAT5O94916 1531 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 IL13P35225 146 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 ABTB2Q8N961 1025 aa15.71■□□□□ 0.11
TCN2-203ENST00000407817 SBNO1A3KN83 1393 aa15.71■□□□□ 0.1
TCN2-203ENST00000407817 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
TCN2-203ENST00000407817 PHRF1Q9P1Y6 1649 aaKnown RBP15.7■□□□□ 0.1
TCN2-203ENST00000407817 RRP1P56182 461 aaKnown RBP15.69■□□□□ 0.1
TCN2-203ENST00000407817 NUTM2GQ5VZR2 741 aa15.69■□□□□ 0.1
TCN2-203ENST00000407817 WDR63Q8IWG1 891 aa15.69■□□□□ 0.1
TCN2-203ENST00000407817 TRMT2AQ8IZ69 625 aaKnown RBP15.69■□□□□ 0.1
TCN2-203ENST00000407817 PHF23Q9BUL5 403 aaPredicted RBP15.69■□□□□ 0.1
TCN2-203ENST00000407817 TNS3Q68CZ2 1445 aa15.69■□□□□ 0.1
TCN2-203ENST00000407817 HMOX1P09601 288 aa15.68■□□□□ 0.1
TCN2-203ENST00000407817 PRKAR2BP31323 418 aa15.68■□□□□ 0.1
TCN2-203ENST00000407817 RSPH6AQ9H0K4 717 aa15.68■□□□□ 0.1
TCN2-203ENST00000407817 SPINK5Q9NQ38 1064 aaPredicted RBP15.68■□□□□ 0.1
TCN2-203ENST00000407817 SOS2Q07890 1332 aaPredicted RBP15.68■□□□□ 0.1
TCN2-203ENST00000407817 AHDC1Q5TGY3 1603 aaPredicted RBP15.68■□□□□ 0.1
TCN2-203ENST00000407817 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
TCN2-203ENST00000407817 USP19O94966 1318 aa15.67■□□□□ 0.1
TCN2-203ENST00000407817 PPP4R2Q9NY27 417 aa15.67■□□□□ 0.1
TCN2-203ENST00000407817 ABCA3Q99758 1704 aa15.67■□□□□ 0.1
TCN2-203ENST00000407817 MAP3K19Q56UN5 1328 aa15.66■□□□□ 0.1
TCN2-203ENST00000407817 FLT4P35916 1363 aa15.66■□□□□ 0.1
TCN2-203ENST00000407817 AMPHP49418 695 aa15.65■□□□□ 0.1
TCN2-203ENST00000407817 EIF4A2Q14240 407 aaKnown RBP15.65■□□□□ 0.1
TCN2-203ENST00000407817 SPATA31A3Q5VYP0 1347 aa15.65■□□□□ 0.1
TCN2-203ENST00000407817 RIPK4P57078 832 aa15.65■□□□□ 0.1
TCN2-203ENST00000407817 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
TCN2-203ENST00000407817 RGPD1P0DJD0 1748 aa15.64■□□□□ 0.09
TCN2-203ENST00000407817 MYH16Q9H6N6 1097 aa15.63■□□□□ 0.09
TCN2-203ENST00000407817 RGPD5Q99666 1765 aa15.63■□□□□ 0.09
TCN2-203ENST00000407817 TRIM35Q9UPQ4 493 aa15.62■□□□□ 0.09
TCN2-203ENST00000407817 KIF24Q5T7B8 1368 aa15.62■□□□□ 0.09
TCN2-203ENST00000407817 COL16A1Q07092 1604 aaPredicted RBP15.62■□□□□ 0.09
TCN2-203ENST00000407817 PHLPP1O60346 1717 aa15.62■□□□□ 0.09
TCN2-203ENST00000407817 COL18A1P39060 1754 aa15.62■□□□□ 0.09
TCN2-203ENST00000407817 ARHGEF10O15013 1369 aa15.61■□□□□ 0.09
TCN2-203ENST00000407817 NFE2L2Q16236 605 aa15.61■□□□□ 0.09
TCN2-203ENST00000407817 SULT6B1Q6IMI4 303 aa15.61■□□□□ 0.09
TCN2-203ENST00000407817 LMOD2Q6P5Q4 547 aa15.61■□□□□ 0.09
TCN2-203ENST00000407817 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
TCN2-203ENST00000407817 PHACTR3Q96KR7 559 aa15.61■□□□□ 0.09
TCN2-203ENST00000407817 PLIN1O60240 522 aa15.59■□□□□ 0.09
TCN2-203ENST00000407817 GCP02774 474 aa15.59■□□□□ 0.09
TCN2-203ENST00000407817 KCNH5Q8NCM2 988 aa15.59■□□□□ 0.09
TCN2-203ENST00000407817 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
TCN2-203ENST00000407817 COL22A1Q8NFW1 1626 aaPredicted RBP15.59■□□□□ 0.09
TCN2-203ENST00000407817 DLG5Q8TDM6 1919 aa15.59■□□□□ 0.09
TCN2-203ENST00000407817 IL16Q14005 1332 aa15.59■□□□□ 0.09
TCN2-203ENST00000407817 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
TCN2-203ENST00000407817 HOXC9P31274 260 aa15.58■□□□□ 0.08
TCN2-203ENST00000407817 AEBP1Q8IUX7 1158 aa15.58■□□□□ 0.08
TCN2-203ENST00000407817 CERKQ8TCT0 537 aa15.58■□□□□ 0.08
TCN2-203ENST00000407817 TOM1O60784 492 aa15.57■□□□□ 0.08
TCN2-203ENST00000407817 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
TCN2-203ENST00000407817 ARHGEF25Q86VW2 580 aa15.57■□□□□ 0.08
TCN2-203ENST00000407817 CALD1Q05682 793 aaKnown RBP15.57■□□□□ 0.08
TCN2-203ENST00000407817 B4GALNT3Q6L9W6 998 aa15.57■□□□□ 0.08
TCN2-203ENST00000407817 TSHZ2Q9NRE2 1034 aa15.57■□□□□ 0.08
TCN2-203ENST00000407817 CABLES1Q8TDN4 633 aa15.56■□□□□ 0.08
TCN2-203ENST00000407817 FANCIQ9NVI1 1328 aa15.55■□□□□ 0.08
TCN2-203ENST00000407817 PLEKHG5O94827 1062 aa15.55■□□□□ 0.08
TCN2-203ENST00000407817 ZBTB7CA1YPR0 619 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 EXOC6Q8TAG9 804 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 TSR2Q969E8 191 aaKnown RBP15.54■□□□□ 0.08
TCN2-203ENST00000407817 CCDC136Q96JN2 1154 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 UBAP1LF5GYI3 381 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 BCAR3O75815 825 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 IP6K1Q92551 441 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 EYA1Q99502 592 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 ABCC6O95255 1503 aa15.54■□□□□ 0.08
TCN2-203ENST00000407817 IGSF1Q8N6C5 1336 aa15.53■□□□□ 0.08
TCN2-203ENST00000407817 LMO7Q8WWI1 1683 aa15.53■□□□□ 0.08
TCN2-203ENST00000407817 CAMTA1Q9Y6Y1 1673 aa15.53■□□□□ 0.08
TCN2-203ENST00000407817 LTV1Q96GA3 475 aaPredicted RBP15.53■□□□□ 0.08
TCN2-203ENST00000407817 CANXP27824 592 aaKnown RBP15.52■□□□□ 0.08
TCN2-203ENST00000407817 PIP4K2BP78356 416 aa15.52■□□□□ 0.08
TCN2-203ENST00000407817 CPDO75976 1380 aa15.52■□□□□ 0.08
TCN2-203ENST00000407817 KDRP35968 1356 aa15.52■□□□□ 0.08
TCN2-203ENST00000407817 CT47B1P0C2W7 299 aaPredicted RBP15.52■□□□□ 0.07
TCN2-203ENST00000407817 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.07
TCN2-203ENST00000407817 RARSP54136 660 aaKnown RBP15.51■□□□□ 0.07
TCN2-203ENST00000407817 ZC3H6P61129 1189 aaKnown RBP15.51■□□□□ 0.07
TCN2-203ENST00000407817 EXOSC9Q06265 439 aaKnown RBP15.51■□□□□ 0.07
TCN2-203ENST00000407817 CRBNQ96SW2 442 aa15.51■□□□□ 0.07
TCN2-203ENST00000407817 GNAI1P63096 354 aa15.5■□□□□ 0.07
TCN2-203ENST00000407817 C20orf194Q5TEA3 1177 aa15.5■□□□□ 0.07
TCN2-203ENST00000407817 LRRC59Q96AG4 307 aaKnown RBP15.5■□□□□ 0.07
TCN2-203ENST00000407817 THUMPD2Q9BTF0 503 aaKnown RBP15.5■□□□□ 0.07
TCN2-203ENST00000407817 AXIN2Q9Y2T1 843 aa15.5■□□□□ 0.07
TCN2-203ENST00000407817 KIAA0232Q92628 1395 aa15.5■□□□□ 0.07
TCN2-203ENST00000407817 IFT57Q9NWB7 429 aa15.49■□□□□ 0.07
TCN2-203ENST00000407817 FAM208AQ9UK61 1670 aaKnown RBP15.49■□□□□ 0.07
TCN2-203ENST00000407817 NCAPD2Q15021 1401 aa15.48■□□□□ 0.07
TCN2-203ENST00000407817 FAM83GA6ND36 823 aa15.48■□□□□ 0.07
TCN2-203ENST00000407817 FRAT1Q92837 279 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms