RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 EXOC6BQ9Y2D4 811 aa18.13■□□□□ 0.49
ITSN2-203ENST00000406921 FAM83GA6ND36 823 aa18.12■□□□□ 0.49
ITSN2-203ENST00000406921 F6X3S4 739 aa18.12■□□□□ 0.49
ITSN2-203ENST00000406921 TRIM29Q14134 588 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 ARID3AQ99856 593 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 CHMP5Q9NZZ3 219 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 KRT28Q7Z3Y7 464 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 PPP6R1Q9UPN7 881 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 RAPGEF6Q8TEU7 1601 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 STK11IPQ8N1F8 1099 aa18.11■□□□□ 0.49
ITSN2-203ENST00000406921 GCC1Q96CN9 775 aa18.1■□□□□ 0.49
ITSN2-203ENST00000406921 TNRQ92752 1358 aa18.1■□□□□ 0.49
ITSN2-203ENST00000406921 SCAF11Q99590 1463 aaKnown RBP18.1■□□□□ 0.49
ITSN2-203ENST00000406921 TPM4P67936 248 aa18.1■□□□□ 0.49
ITSN2-203ENST00000406921 KAT6BQ8WYB5 2073 aa18.1■□□□□ 0.49
ITSN2-203ENST00000406921 HSPA2P54652 639 aa18.1■□□□□ 0.49
ITSN2-203ENST00000406921 HSP90AB2PQ58FF8 381 aa18.1■□□□□ 0.49
ITSN2-203ENST00000406921 LRRCC1Q9C099 1032 aa18.1■□□□□ 0.49
ITSN2-203ENST00000406921 ERICH2A1L162 156 aa18.09■□□□□ 0.49
ITSN2-203ENST00000406921 BICD2Q8TD16 824 aa18.09■□□□□ 0.49
ITSN2-203ENST00000406921 ZRANB1Q9UGI0 708 aa18.09■□□□□ 0.49
ITSN2-203ENST00000406921 CT47B1P0C2W7 299 aaPredicted RBP18.08■□□□□ 0.49
ITSN2-203ENST00000406921 FAM135AQ9P2D6 1515 aa18.08■□□□□ 0.49
ITSN2-203ENST00000406921 RARSP54136 660 aaKnown RBP18.08■□□□□ 0.49
ITSN2-203ENST00000406921 FANCIQ9NVI1 1328 aa18.08■□□□□ 0.48
ITSN2-203ENST00000406921 RRP12Q5JTH9 1297 aaKnown RBP18.08■□□□□ 0.48
ITSN2-203ENST00000406921 CCDC57Q2TAC2 916 aa18.07■□□□□ 0.48
ITSN2-203ENST00000406921 TBC1D2BQ9UPU7 963 aa18.07■□□□□ 0.48
ITSN2-203ENST00000406921 A2MP01023 1474 aa18.07■□□□□ 0.48
ITSN2-203ENST00000406921 SPINK5Q9NQ38 1064 aaPredicted RBP18.07■□□□□ 0.48
ITSN2-203ENST00000406921 BECN2A8MW95 431 aa18.07■□□□□ 0.48
ITSN2-203ENST00000406921 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
ITSN2-203ENST00000406921 MPHOSPH8Q99549 860 aa18.07■□□□□ 0.48
ITSN2-203ENST00000406921 PHF14O94880 888 aa18.06■□□□□ 0.48
ITSN2-203ENST00000406921 UGGT2Q9NYU1 1516 aa18.06■□□□□ 0.48
ITSN2-203ENST00000406921 PDE4CQ08493 712 aa18.06■□□□□ 0.48
ITSN2-203ENST00000406921 FKBP4Q02790 459 aaKnown RBP eCLIP18.06■□□□□ 0.48
ITSN2-203ENST00000406921 AACSQ86V21 672 aa18.06■□□□□ 0.48
ITSN2-203ENST00000406921 ATP2B1P20020 1258 aa18.05■□□□□ 0.48
ITSN2-203ENST00000406921 CHMP4CQ96CF2 233 aa18.05■□□□□ 0.48
ITSN2-203ENST00000406921 NCKAP5LQ9HCH0 1330 aa18.05■□□□□ 0.48
ITSN2-203ENST00000406921 ANXA1P04083 346 aa18.05■□□□□ 0.48
ITSN2-203ENST00000406921 CHD1LQ86WJ1 897 aa18.05■□□□□ 0.48
ITSN2-203ENST00000406921 NGLY1Q96IV0 654 aa18.05■□□□□ 0.48
ITSN2-203ENST00000406921 ANO8Q9HCE9 1232 aaPredicted RBP18.04■□□□□ 0.48
ITSN2-203ENST00000406921 WDR7Q9Y4E6 1490 aa18.04■□□□□ 0.48
ITSN2-203ENST00000406921 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
ITSN2-203ENST00000406921 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
ITSN2-203ENST00000406921 ERC1Q8IUD2 1116 aa18.03■□□□□ 0.48
ITSN2-203ENST00000406921 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
ITSN2-203ENST00000406921 TMOD3Q9NYL9 352 aa18.03■□□□□ 0.48
ITSN2-203ENST00000406921 SMARCA5O60264 1052 aaPredicted RBP18.03■□□□□ 0.48
ITSN2-203ENST00000406921 TPD52L1Q16890 204 aaPredicted RBP18.03■□□□□ 0.48
ITSN2-203ENST00000406921 TTC39AQ5SRH9 613 aa18.03■□□□□ 0.48
ITSN2-203ENST00000406921 CEP126Q9P2H0 1117 aa18.03■□□□□ 0.48
ITSN2-203ENST00000406921 GOLGA6L19H0YKK7 550 aa18.03■□□□□ 0.48
ITSN2-203ENST00000406921 GSE1Q14687 1217 aa18.03■□□□□ 0.48
ITSN2-203ENST00000406921 CTDP1Q9Y5B0 961 aaPredicted RBP18.02■□□□□ 0.48
ITSN2-203ENST00000406921 CABLES1Q8TDN4 633 aa18.02■□□□□ 0.47
ITSN2-203ENST00000406921 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
ITSN2-203ENST00000406921 IFT57Q9NWB7 429 aa18.01■□□□□ 0.47
ITSN2-203ENST00000406921 STARD3NLO95772 234 aa18.01■□□□□ 0.47
ITSN2-203ENST00000406921 NUCB2P80303 420 aa18■□□□□ 0.47
ITSN2-203ENST00000406921 AEBP1Q8IUX7 1158 aa18■□□□□ 0.47
ITSN2-203ENST00000406921 UHRF1BP1LA0JNW5 1464 aa18■□□□□ 0.47
ITSN2-203ENST00000406921 CWC27Q6UX04 472 aaKnown RBP18■□□□□ 0.47
ITSN2-203ENST00000406921 BACH2Q9BYV9 841 aa18■□□□□ 0.47
ITSN2-203ENST00000406921 MYD88Q99836 296 aa17.99■□□□□ 0.47
ITSN2-203ENST00000406921 AMOTQ4VCS5 1084 aa17.99■□□□□ 0.47
ITSN2-203ENST00000406921 STK3Q13188 491 aa17.99■□□□□ 0.47
ITSN2-203ENST00000406921 RPAP2Q8IXW5 612 aaPredicted RBP17.99■□□□□ 0.47
ITSN2-203ENST00000406921 ZNF518AQ6AHZ1 1483 aa17.99■□□□□ 0.47
ITSN2-203ENST00000406921 NFKBIBQ15653 356 aa17.99■□□□□ 0.47
ITSN2-203ENST00000406921 SKOR2Q2VWA4 1001 aaPredicted RBP17.99■□□□□ 0.47
ITSN2-203ENST00000406921 SF3B2Q13435 895 aaKnown RBP17.98■□□□□ 0.47
ITSN2-203ENST00000406921 ZBTB3Q9H5J0 574 aa17.98■□□□□ 0.47
ITSN2-203ENST00000406921 TRIM27P14373 513 aa17.98■□□□□ 0.47
ITSN2-203ENST00000406921 ANKRD24Q8TF21 1146 aa17.98■□□□□ 0.47
ITSN2-203ENST00000406921 TTC21BQ7Z4L5 1316 aa17.98■□□□□ 0.47
ITSN2-203ENST00000406921 PSMA5P28066 241 aa17.98■□□□□ 0.47
ITSN2-203ENST00000406921 SAFBQ15424 915 aaKnown RBP eCLIP17.98■□□□□ 0.47
ITSN2-203ENST00000406921 ADAMTS12P58397 1594 aa17.98■□□□□ 0.47
ITSN2-203ENST00000406921 IKQ13123 557 aaPredicted RBP17.97■□□□□ 0.47
ITSN2-203ENST00000406921 KIAA0556O60303 1618 aa17.97■□□□□ 0.47
ITSN2-203ENST00000406921 GPTP24298 496 aa17.97■□□□□ 0.47
ITSN2-203ENST00000406921 TESK2Q96S53 571 aa17.97■□□□□ 0.47
ITSN2-203ENST00000406921 MAPKBP1O60336 1514 aa17.97■□□□□ 0.47
ITSN2-203ENST00000406921 KCNA6P17658 529 aa17.96■□□□□ 0.47
ITSN2-203ENST00000406921 JARID2Q92833 1246 aaPredicted RBP17.96■□□□□ 0.47
ITSN2-203ENST00000406921 MBIPQ9NS73 344 aa17.96■□□□□ 0.46
ITSN2-203ENST00000406921 EXOC5O00471 708 aa17.95■□□□□ 0.46
ITSN2-203ENST00000406921 ABCF2Q9UG63 623 aa17.95■□□□□ 0.46
ITSN2-203ENST00000406921 TCEAL9Q9UHQ7 104 aa17.95■□□□□ 0.46
ITSN2-203ENST00000406921 CEBPZQ03701 1054 aaKnown RBP17.95■□□□□ 0.46
ITSN2-203ENST00000406921 ATP5J2-PTCD1G3V325 749 aa17.95■□□□□ 0.46
ITSN2-203ENST00000406921 IDH1O75874 414 aaKnown RBP17.95■□□□□ 0.46
ITSN2-203ENST00000406921 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
ITSN2-203ENST00000406921 FLIIQ13045 1269 aa17.95■□□□□ 0.46
ITSN2-203ENST00000406921 KIF21AQ7Z4S6 1674 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms