RNA–Protein interactions for RNA: ENST00000406310.5

ESRRA-203, Transcript of estrogen related receptor alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ESRRA, Length 2,218 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESRRA-203ENST00000406310 LMBRD1Q9NUN5 540 aa29.4■■■□□ 2.3
ESRRA-203ENST00000406310 RBM42Q9BTD8 480 aaKnown RBP29.39■■■□□ 2.3
ESRRA-203ENST00000406310 CAVIN1Q6NZI2 390 aaKnown RBP29.39■■■□□ 2.29
ESRRA-203ENST00000406310 CYB5RLQ6IPT4 315 aa29.38■■■□□ 2.29
ESRRA-203ENST00000406310 R3HCC1Q9Y3T6 440 aaKnown RBP29.38■■■□□ 2.29
ESRRA-203ENST00000406310 ZKSCAN5Q9Y2L8 839 aa29.37■■■□□ 2.29
ESRRA-203ENST00000406310 AK9Q5TCS8 1911 aa29.37■■■□□ 2.29
ESRRA-203ENST00000406310 DYNC1I1O14576 645 aa29.37■■■□□ 2.29
ESRRA-203ENST00000406310 CDC42BPGQ6DT37 1551 aa29.36■■■□□ 2.29
ESRRA-203ENST00000406310 NCLP19338 710 aaKnown RBP29.35■■■□□ 2.29
ESRRA-203ENST00000406310 CCDC39Q9UFE4 941 aa29.35■■■□□ 2.29
ESRRA-203ENST00000406310 NPM1P06748 294 aaKnown RBP eCLIP29.35■■■□□ 2.29
ESRRA-203ENST00000406310 RBSNQ9H1K0 784 aa29.34■■■□□ 2.29
ESRRA-203ENST00000406310 DIAPH1O60610 1272 aaKnown RBP29.32■■■□□ 2.28
ESRRA-203ENST00000406310 KIF24Q5T7B8 1368 aa29.32■■■□□ 2.28
ESRRA-203ENST00000406310 UQCRHLA0A096LP55 91 aa29.32■■■□□ 2.28
ESRRA-203ENST00000406310 ST18O60284 1047 aa29.32■■■□□ 2.28
ESRRA-203ENST00000406310 UQCRHP07919 91 aa29.32■■■□□ 2.28
ESRRA-203ENST00000406310 ABCC4O15439 1325 aa29.31■■■□□ 2.28
ESRRA-203ENST00000406310 ZFYVE9O95405 1425 aa29.31■■■□□ 2.28
ESRRA-203ENST00000406310 FCHSD2O94868 740 aa29.3■■■□□ 2.28
ESRRA-203ENST00000406310 CHGAP10645 457 aaKnown RBP29.3■■■□□ 2.28
ESRRA-203ENST00000406310 FAM13BQ9NYF5 915 aa29.3■■■□□ 2.28
ESRRA-203ENST00000406310 A0A1W2PP64 1363 aa29.3■■■□□ 2.28
ESRRA-203ENST00000406310 PNPLA6Q8IY17 1366 aa29.3■■■□□ 2.28
ESRRA-203ENST00000406310 INTS3Q68E01 1043 aaKnown RBP29.3■■■□□ 2.28
ESRRA-203ENST00000406310 LRSAM1Q6UWE0 723 aa29.3■■■□□ 2.28
ESRRA-203ENST00000406310 MRPL50Q8N5N7 158 aaKnown RBP29.3■■■□□ 2.28
ESRRA-203ENST00000406310 RBM10P98175 930 aaKnown RBP29.29■■■□□ 2.28
ESRRA-203ENST00000406310 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.29■■■□□ 2.28
ESRRA-203ENST00000406310 ASXL2Q76L83 1435 aa29.29■■■□□ 2.28
ESRRA-203ENST00000406310 TMEM132EQ6IEE7 984 aa29.29■■■□□ 2.28
ESRRA-203ENST00000406310 CASC1Q6TDU7 716 aa29.29■■■□□ 2.28
ESRRA-203ENST00000406310 PRIM1P49642 420 aaKnown RBP29.28■■■□□ 2.28
ESRRA-203ENST00000406310 SASS6Q6UVJ0 657 aa29.28■■■□□ 2.28
ESRRA-203ENST00000406310 YEATS2Q9ULM3 1422 aa29.28■■■□□ 2.28
ESRRA-203ENST00000406310 MBD3O95983 291 aa29.27■■■□□ 2.28
ESRRA-203ENST00000406310 USP26Q9BXU7 913 aa29.27■■■□□ 2.28
ESRRA-203ENST00000406310 TTC22Q5TAA0 569 aa29.26■■■□□ 2.27
ESRRA-203ENST00000406310 SMAP1Q8IYB5 467 aaPredicted RBP29.26■■■□□ 2.27
ESRRA-203ENST00000406310 GSPT1P15170 499 aaKnown RBP29.25■■■□□ 2.27
ESRRA-203ENST00000406310 SIRT2Q8IXJ6 389 aa29.25■■■□□ 2.27
ESRRA-203ENST00000406310 TERF2IPQ9NYB0 399 aa29.25■■■□□ 2.27
ESRRA-203ENST00000406310 ATAD2Q6PL18 1390 aa29.25■■■□□ 2.27
ESRRA-203ENST00000406310 XPCQ01831 940 aaPredicted RBP29.25■■■□□ 2.27
ESRRA-203ENST00000406310 PLEKHM2Q8IWE5 1019 aa29.25■■■□□ 2.27
ESRRA-203ENST00000406310 API5Q9BZZ5 524 aaKnown RBP29.25■■■□□ 2.27
ESRRA-203ENST00000406310 LRRC7Q96NW7 1537 aa29.24■■■□□ 2.27
ESRRA-203ENST00000406310 VAMP4O75379 141 aa29.24■■■□□ 2.27
ESRRA-203ENST00000406310 FAM135BQ49AJ0 1406 aa29.24■■■□□ 2.27
ESRRA-203ENST00000406310 PRPF40AO75400 957 aaKnown RBP29.23■■■□□ 2.27
ESRRA-203ENST00000406310 C1orf115Q9H7X2 142 aa29.23■■■□□ 2.27
ESRRA-203ENST00000406310 GGNBP2Q9H3C7 697 aa29.22■■■□□ 2.27
ESRRA-203ENST00000406310 CABP2Q9NPB3 220 aa29.22■■■□□ 2.27
ESRRA-203ENST00000406310 KIDINS220Q9ULH0 1771 aa29.22■■■□□ 2.27
ESRRA-203ENST00000406310 NPATQ14207 1427 aa29.21■■■□□ 2.27
ESRRA-203ENST00000406310 GNAI1P63096 354 aa29.21■■■□□ 2.27
ESRRA-203ENST00000406310 GPT2Q8TD30 523 aa29.21■■■□□ 2.27
ESRRA-203ENST00000406310 DCTPP1Q9H773 170 aa29.21■■■□□ 2.27
ESRRA-203ENST00000406310 PRDM4Q9UKN5 801 aa29.21■■■□□ 2.27
ESRRA-203ENST00000406310 FRMPD1Q5SYB0 1578 aa29.21■■■□□ 2.27
ESRRA-203ENST00000406310 VGFO15240 615 aaPredicted RBP29.2■■■□□ 2.27
ESRRA-203ENST00000406310 IFT57Q9NWB7 429 aa29.2■■■□□ 2.27
ESRRA-203ENST00000406310 RIMBP3CA6NJZ7 1639 aa29.2■■■□□ 2.26
ESRRA-203ENST00000406310 RIMBP3BA6NNM3 1639 aa29.2■■■□□ 2.26
ESRRA-203ENST00000406310 CAMSAP1Q5T5Y3 1602 aa29.2■■■□□ 2.26
ESRRA-203ENST00000406310 RIMBP3Q9UFD9 1639 aa29.2■■■□□ 2.26
ESRRA-203ENST00000406310 REC8O95072 547 aa29.2■■■□□ 2.26
ESRRA-203ENST00000406310 KIF20BQ96Q89 1820 aa29.19■■■□□ 2.26
ESRRA-203ENST00000406310 CLTCQ00610 1675 aaKnown RBP29.19■■■□□ 2.26
ESRRA-203ENST00000406310 FYB1O15117 783 aa29.18■■■□□ 2.26
ESRRA-203ENST00000406310 SYAP1Q96A49 352 aaPredicted RBP29.17■■■□□ 2.26
ESRRA-203ENST00000406310 PIK3C2BO00750 1634 aa29.17■■■□□ 2.26
ESRRA-203ENST00000406310 NFE2L2Q16236 605 aa29.16■■■□□ 2.26
ESRRA-203ENST00000406310 MCM2P49736 904 aa29.14■■■□□ 2.26
ESRRA-203ENST00000406310 PKP1Q13835 747 aa29.14■■■□□ 2.26
ESRRA-203ENST00000406310 TMEM63CQ9P1W3 806 aa29.14■■■□□ 2.26
ESRRA-203ENST00000406310 SRPK2P78362 688 aaKnown RBP29.14■■■□□ 2.26
ESRRA-203ENST00000406310 KIAA2012Q0VF49 1180 aa29.14■■■□□ 2.26
ESRRA-203ENST00000406310 NEXMIFQ5QGS0 1516 aa29.14■■■□□ 2.26
ESRRA-203ENST00000406310 SYCE3A1L190 88 aa29.13■■■□□ 2.25
ESRRA-203ENST00000406310 HECW2Q9P2P5 1572 aa29.13■■■□□ 2.25
ESRRA-203ENST00000406310 PRKAR2BP31323 418 aa29.13■■■□□ 2.25
ESRRA-203ENST00000406310 RBM27Q9P2N5 1060 aaKnown RBP29.13■■■□□ 2.25
ESRRA-203ENST00000406310 ZDHHC9Q9Y397 364 aa29.13■■■□□ 2.25
ESRRA-203ENST00000406310 KNDC1Q76NI1 1749 aa29.12■■■□□ 2.25
ESRRA-203ENST00000406310 PHF14O94880 888 aa29.12■■■□□ 2.25
ESRRA-203ENST00000406310 HDGFL2Q7Z4V5 671 aaPredicted RBP29.11■■■□□ 2.25
ESRRA-203ENST00000406310 CFAP65Q6ZU64 1925 aaKnown RBP29.11■■■□□ 2.25
ESRRA-203ENST00000406310 ZNF853P0CG23 659 aa29.1■■■□□ 2.25
ESRRA-203ENST00000406310 LMOD3Q0VAK6 560 aa29.1■■■□□ 2.25
ESRRA-203ENST00000406310 RPAP2Q8IXW5 612 aaPredicted RBP29.1■■■□□ 2.25
ESRRA-203ENST00000406310 CD163L1Q9NR16 1453 aa29.1■■■□□ 2.25
ESRRA-203ENST00000406310 ZGPATQ8N5A5 531 aaKnown RBP29.1■■■□□ 2.25
ESRRA-203ENST00000406310 TWISTNBQ3B726 338 aaPredicted RBP29.09■■■□□ 2.25
ESRRA-203ENST00000406310 PRIMPOLQ96LW4 560 aa29.09■■■□□ 2.25
ESRRA-203ENST00000406310 TSPY26PQ9H489 355 aa29.09■■■□□ 2.25
ESRRA-203ENST00000406310 HMGN5P82970 282 aaKnown RBP29.09■■■□□ 2.25
ESRRA-203ENST00000406310 PTMAP06454 111 aaKnown RBP29.08■■■□□ 2.25
ESRRA-203ENST00000406310 ANKRD44Q8N8A2 993 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms