RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 FAM208AQ9UK61 1670 aaKnown RBP4.93□□□□□ -1.62
RTN4-209ENST00000405240 NUCB1Q02818 461 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 FRAT1Q92837 279 aaPredicted RBP4.92□□□□□ -1.62
RTN4-209ENST00000405240 WASLO00401 505 aaPredicted RBP4.92□□□□□ -1.62
RTN4-209ENST00000405240 VAMP4O75379 141 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 SLC4A3P48751 1232 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 RIPK4P57078 832 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 NEUROD2Q15784 382 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 NFE2L2Q16236 605 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 MRPL50Q8N5N7 158 aaKnown RBP4.92□□□□□ -1.62
RTN4-209ENST00000405240 IFT57Q9NWB7 429 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 NOB1Q9ULX3 412 aaKnown RBP4.92□□□□□ -1.62
RTN4-209ENST00000405240 PIK3C2AO00443 1686 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 ZBTB7BO15156 539 aaPredicted RBP4.92□□□□□ -1.62
RTN4-209ENST00000405240 PHRF1Q9P1Y6 1649 aaKnown RBP4.92□□□□□ -1.62
RTN4-209ENST00000405240 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.92□□□□□ -1.62
RTN4-209ENST00000405240 STK26Q9P289 416 aa4.92□□□□□ -1.62
RTN4-209ENST00000405240 CANXP27824 592 aaKnown RBP4.91□□□□□ -1.62
RTN4-209ENST00000405240 RBM25P49756 843 aaKnown RBP4.91□□□□□ -1.62
RTN4-209ENST00000405240 TMEM57Q8N5G2 664 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 ZNF692Q9BU19 519 aaPredicted RBP4.91□□□□□ -1.62
RTN4-209ENST00000405240 PHACTR3Q96KR7 559 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 BCL2L13Q9BXK5 485 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 SMC4Q9NTJ3 1288 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 POGKQ9P215 609 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 PLEKHG1Q9ULL1 1385 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 NWD1Q149M9 1564 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 TMEM2Q9UHN6 1383 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 IPO8O15397 1037 aaKnown RBP4.91□□□□□ -1.62
RTN4-209ENST00000405240 WAPLQ7Z5K2 1190 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 TBC1D2Q9BYX2 928 aa4.91□□□□□ -1.62
RTN4-209ENST00000405240 FRAT2O75474 233 aaPredicted RBP4.9□□□□□ -1.62
RTN4-209ENST00000405240 SNX21Q969T3 373 aa4.9□□□□□ -1.62
RTN4-209ENST00000405240 PRR36Q9H6K5 1346 aa4.9□□□□□ -1.62
RTN4-209ENST00000405240 KIAA0232Q92628 1395 aa4.9□□□□□ -1.62
RTN4-209ENST00000405240 CALD1Q05682 793 aaKnown RBP4.9□□□□□ -1.63
RTN4-209ENST00000405240 SAFB2Q14151 953 aaKnown RBP eCLIP4.9□□□□□ -1.638e-8■■■□□ 19.2
RTN4-209ENST00000405240 BECN1Q14457 450 aa4.9□□□□□ -1.63
RTN4-209ENST00000405240 CRB1P82279 1406 aa4.9□□□□□ -1.63
RTN4-209ENST00000405240 PTPRUQ92729 1446 aa4.9□□□□□ -1.63
RTN4-209ENST00000405240 ROBO2Q9HCK4 1378 aa4.9□□□□□ -1.63
RTN4-209ENST00000405240 PLEKHG3A1L390 1219 aa4.9□□□□□ -1.63
RTN4-209ENST00000405240 PRKAR2BP31323 418 aa4.9□□□□□ -1.63
RTN4-209ENST00000405240 CFAP44Q96MT7 982 aa4.9□□□□□ -1.63
RTN4-209ENST00000405240 U2SURPO15042 1029 aaKnown RBP4.89□□□□□ -1.63
RTN4-209ENST00000405240 USP6P35125 1406 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 GNAI1P63096 354 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 FAM69CQ0P6D2 419 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 SIRT2Q8IXJ6 389 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 ATP10DQ9P241 1426 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 FER1L4A9Z1Z3 1794 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 TNRQ92752 1358 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 KDM3BQ7LBC6 1761 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 BMP2KLQ5H9B9 411 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 FTSJ3Q8IY81 847 aaKnown RBP4.89□□□□□ -1.63
RTN4-209ENST00000405240 GCC1Q96CN9 775 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 NUDT16Q96DE0 195 aaKnown RBP4.89□□□□□ -1.63
RTN4-209ENST00000405240 KIF2CQ99661 725 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 MBIPQ9NS73 344 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 MED1Q15648 1581 aaPredicted RBP4.89□□□□□ -1.63
RTN4-209ENST00000405240 CHD2O14647 1828 aaKnown RBP4.89□□□□□ -1.63
RTN4-209ENST00000405240 CRYBG1Q9Y4K1 1723 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 KDRP35968 1356 aa4.89□□□□□ -1.63
RTN4-209ENST00000405240 CAMTA1Q9Y6Y1 1673 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 CHD1LQ86WJ1 897 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 NME9Q86XW9 330 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 CHMP4BQ9H444 224 aaKnown RBP4.88□□□□□ -1.63
RTN4-209ENST00000405240 EMILIN1Q9Y6C2 1016 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 CCDC61Q9Y6R9 512 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 ARHGEF10O15013 1369 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 INTS3Q68E01 1043 aaKnown RBP4.88□□□□□ -1.63
RTN4-209ENST00000405240 TSPYL6Q8N831 410 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 C22orf23Q9BZE7 217 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 ZNF142P52746 1687 aaPredicted RBP4.88□□□□□ -1.63
RTN4-209ENST00000405240 LMO7Q8WWI1 1683 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 RTL1A6NKG5 1358 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 LTN1O94822 1766 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 FSD2A1L4K1 749 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 LMOD3Q0VAK6 560 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 ITPRIPQ8IWB1 547 aa4.88□□□□□ -1.63
RTN4-209ENST00000405240 SIPA1L3O60292 1781 aaPredicted RBP4.87□□□□□ -1.63
RTN4-209ENST00000405240 CHL1O00533 1208 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 ADAMTS7Q9UKP4 1686 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 FBLN1P23142 703 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 CLEC17AQ6ZS10 378 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 DAXXQ9UER7 740 aaPredicted RBP4.87□□□□□ -1.63
RTN4-209ENST00000405240 ZRANB1Q9UGI0 708 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 C8orf58Q8NAV2 365 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 TTC21BQ7Z4L5 1316 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 CEP170BQ9Y4F5 1589 aaPredicted RBP4.87□□□□□ -1.63
RTN4-209ENST00000405240 ANKARQ7Z5J8 1434 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 IL27Q8NEV9 243 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 DCTPP1Q9H773 170 aa4.87□□□□□ -1.63
RTN4-209ENST00000405240 UPF2Q9HAU5 1272 aaKnown RBP4.87□□□□□ -1.63
RTN4-209ENST00000405240 LMTK3Q96Q04 1460 aa4.86□□□□□ -1.63
RTN4-209ENST00000405240 HDGFP51858 240 aaKnown RBP4.86□□□□□ -1.63
RTN4-209ENST00000405240 EIF4A2Q14240 407 aaKnown RBP4.86□□□□□ -1.63
RTN4-209ENST00000405240 CYB5RLQ6IPT4 315 aa4.86□□□□□ -1.63
RTN4-209ENST00000405240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.86□□□□□ -1.631e-7■■■□□ 14.8
RTN4-209ENST00000405240 PXDNLA1KZ92 1463 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms