RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 ZKSCAN1P17029 563 aaPredicted RBP16.8■□□□□ 0.28
HMGA2-204ENST00000403681 NECTIN2Q92692 538 aa16.8■□□□□ 0.28
HMGA2-204ENST00000403681 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
HMGA2-204ENST00000403681 DISP1Q96F81 1524 aa16.8■□□□□ 0.28
HMGA2-204ENST00000403681 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
HMGA2-204ENST00000403681 PPP1R9BQ96SB3 815 aa16.8■□□□□ 0.28
HMGA2-204ENST00000403681 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
HMGA2-204ENST00000403681 IL16Q14005 1332 aa16.79■□□□□ 0.28
HMGA2-204ENST00000403681 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
HMGA2-204ENST00000403681 TERF1P54274 439 aa16.79■□□□□ 0.28
HMGA2-204ENST00000403681 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
HMGA2-204ENST00000403681 MAGI2Q86UL8 1455 aa16.79■□□□□ 0.28
HMGA2-204ENST00000403681 TTC22Q5TAA0 569 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 SHANK2Q9UPX8 1470 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 CCDC192P0DO97 292 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 ZNF445P59923 1031 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 PPP4R3BQ5MIZ7 849 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 PRIMPOLQ96LW4 560 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 ZNF830Q96NB3 372 aaPredicted RBP16.78■□□□□ 0.28
HMGA2-204ENST00000403681 H3BQV1 296 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 IFFO2Q5TF58 517 aa16.78■□□□□ 0.28
HMGA2-204ENST00000403681 EIF2AK4Q9P2K8 1649 aaKnown RBP16.78■□□□□ 0.28
HMGA2-204ENST00000403681 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
HMGA2-204ENST00000403681 ZGPATQ8N5A5 531 aaKnown RBP16.77■□□□□ 0.28
HMGA2-204ENST00000403681 KIAA0556O60303 1618 aa16.77■□□□□ 0.27
HMGA2-204ENST00000403681 ERBB4Q15303 1308 aa16.77■□□□□ 0.27
HMGA2-204ENST00000403681 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.76■□□□□ 0.27
HMGA2-204ENST00000403681 ADCY5O95622 1261 aa16.76■□□□□ 0.27
HMGA2-204ENST00000403681 TPM4P67936 248 aa16.76■□□□□ 0.27
HMGA2-204ENST00000403681 CCDC183Q5T5S1 534 aa16.76■□□□□ 0.27
HMGA2-204ENST00000403681 CABP1Q9NZU7 370 aa16.76■□□□□ 0.27
HMGA2-204ENST00000403681 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
HMGA2-204ENST00000403681 GNAI2P04899 355 aa16.76■□□□□ 0.27
HMGA2-204ENST00000403681 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
HMGA2-204ENST00000403681 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
HMGA2-204ENST00000403681 CCDC112Q8NEF3 446 aa16.75■□□□□ 0.27
HMGA2-204ENST00000403681 LRRCC1Q9C099 1032 aa16.75■□□□□ 0.27
HMGA2-204ENST00000403681 ATP10BO94823 1461 aa16.74■□□□□ 0.27
HMGA2-204ENST00000403681 GNAI3P08754 354 aa16.74■□□□□ 0.27
HMGA2-204ENST00000403681 SDSP20132 328 aa16.74■□□□□ 0.27
HMGA2-204ENST00000403681 TMX3Q96JJ7 454 aa16.74■□□□□ 0.27
HMGA2-204ENST00000403681 EXOC6BQ9Y2D4 811 aa16.74■□□□□ 0.27
HMGA2-204ENST00000403681 SPDYE4A6NLX3 237 aa16.74■□□□□ 0.27
HMGA2-204ENST00000403681 CCDC94Q9BW85 323 aaPredicted RBP16.74■□□□□ 0.27
HMGA2-204ENST00000403681 NUTM2FA1L443 756 aa16.73■□□□□ 0.27
HMGA2-204ENST00000403681 CCDC66A2RUB6 948 aa16.73■□□□□ 0.27
HMGA2-204ENST00000403681 SMAP1Q8IYB5 467 aaPredicted RBP16.73■□□□□ 0.27
HMGA2-204ENST00000403681 C16orf71Q8IYS4 520 aaPredicted RBP16.73■□□□□ 0.27
HMGA2-204ENST00000403681 ARHGAP45Q92619 1136 aa16.73■□□□□ 0.27
HMGA2-204ENST00000403681 TTC12Q9H892 705 aaPredicted RBP16.73■□□□□ 0.27
HMGA2-204ENST00000403681 HCLS1P14317 486 aaPredicted RBP16.72■□□□□ 0.27
HMGA2-204ENST00000403681 SURF6O75683 361 aaKnown RBP16.72■□□□□ 0.27
HMGA2-204ENST00000403681 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
HMGA2-204ENST00000403681 UVSSAQ2YD98 709 aa16.72■□□□□ 0.27
HMGA2-204ENST00000403681 AMPHP49418 695 aa16.71■□□□□ 0.27
HMGA2-204ENST00000403681 UBTFL1P0CB47 393 aaPredicted RBP16.71■□□□□ 0.27
HMGA2-204ENST00000403681 SF3A1Q15459 793 aaKnown RBP16.71■□□□□ 0.27
HMGA2-204ENST00000403681 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.27
HMGA2-204ENST00000403681 DCTN1Q14203 1278 aa16.71■□□□□ 0.27
HMGA2-204ENST00000403681 NPHP1O15259 732 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 USP26Q9BXU7 913 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 NSD2O96028 1365 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 HOMER1Q86YM7 354 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 CNTROBQ8N137 903 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 CHMP4AQ9BY43 222 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 CCT4P50991 539 aaKnown RBP16.7■□□□□ 0.26
HMGA2-204ENST00000403681 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 ZBTB7BO15156 539 aaPredicted RBP16.7■□□□□ 0.26
HMGA2-204ENST00000403681 ZNF500O60304 480 aaPredicted RBP16.7■□□□□ 0.26
HMGA2-204ENST00000403681 CDK19Q9BWU1 502 aa16.7■□□□□ 0.26
HMGA2-204ENST00000403681 MLECQ14165 292 aa16.69■□□□□ 0.26
HMGA2-204ENST00000403681 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
HMGA2-204ENST00000403681 MRPL50Q8N5N7 158 aaKnown RBP16.69■□□□□ 0.26
HMGA2-204ENST00000403681 MAP4K4O95819 1239 aaPredicted RBP16.68■□□□□ 0.26
HMGA2-204ENST00000403681 IFIT2P09913 472 aaKnown RBP16.68■□□□□ 0.26
HMGA2-204ENST00000403681 KRT85P78386 507 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 FBXW7Q969H0 707 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 PDCP20941 246 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 TEX35Q5T0J7 233 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 ATAD2Q6PL18 1390 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 ABCC2Q92887 1545 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 CD2BP2O95400 341 aaKnown RBP16.68■□□□□ 0.26
HMGA2-204ENST00000403681 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 WDR7Q9Y4E6 1490 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
HMGA2-204ENST00000403681 MX1P20591 662 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 NUP62CLQ9H1M0 184 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 C14orf93Q9H972 538 aaKnown RBP16.68■□□□□ 0.26
HMGA2-204ENST00000403681 IL1RAPL2Q9NP60 686 aa16.68■□□□□ 0.26
HMGA2-204ENST00000403681 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
HMGA2-204ENST00000403681 AEBP1Q8IUX7 1158 aa16.67■□□□□ 0.26
HMGA2-204ENST00000403681 SRCIN1Q9C0H9 1055 aa16.67■□□□□ 0.26
HMGA2-204ENST00000403681 RPGRIP1LQ68CZ1 1315 aa16.67■□□□□ 0.26
HMGA2-204ENST00000403681 USP48Q86UV5 1035 aa16.67■□□□□ 0.26
HMGA2-204ENST00000403681 DCTPP1Q9H773 170 aa16.67■□□□□ 0.26
HMGA2-204ENST00000403681 LARP1BQ659C4 914 aaKnown RBP16.66■□□□□ 0.26
HMGA2-204ENST00000403681 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms