RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 GRPEL1Q9HAV7 217 aa14.93□□□□□ -0.02
RBM39-206ENST00000403542 BMP2KLQ5H9B9 411 aa14.93□□□□□ -0.02
RBM39-206ENST00000403542 MIS18AQ9NYP9 233 aa14.93□□□□□ -0.02
RBM39-206ENST00000403542 MLH3Q9UHC1 1453 aa14.93□□□□□ -0.02
RBM39-206ENST00000403542 HECW2Q9P2P5 1572 aa14.92□□□□□ -0.02
RBM39-206ENST00000403542 LRRC7Q96NW7 1537 aa14.92□□□□□ -0.02
RBM39-206ENST00000403542 PTPRMP28827 1452 aa14.92□□□□□ -0.02
RBM39-206ENST00000403542 ZMYM3Q14202 1370 aa14.92□□□□□ -0.02
RBM39-206ENST00000403542 DDX11L8A8MPP1 907 aa14.91□□□□□ -0.02
RBM39-206ENST00000403542 GSPT1P15170 499 aaKnown RBP14.91□□□□□ -0.02
RBM39-206ENST00000403542 NCLP19338 710 aaKnown RBP14.91□□□□□ -0.02
RBM39-206ENST00000403542 MCM10Q7L590 875 aa14.91□□□□□ -0.02
RBM39-206ENST00000403542 GNAI1P63096 354 aa14.91□□□□□ -0.02
RBM39-206ENST00000403542 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
RBM39-206ENST00000403542 USP32Q8NFA0 1604 aa14.91□□□□□ -0.02
RBM39-206ENST00000403542 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
RBM39-206ENST00000403542 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
RBM39-206ENST00000403542 CHAMP1Q96JM3 812 aa14.91□□□□□ -0.02
RBM39-206ENST00000403542 IL13P35225 146 aa14.89□□□□□ -0.03
RBM39-206ENST00000403542 GCC1Q96CN9 775 aa14.89□□□□□ -0.03
RBM39-206ENST00000403542 PIK3C2BO00750 1634 aa14.89□□□□□ -0.03
RBM39-206ENST00000403542 K7ELQ4 463 aaPredicted RBP14.89□□□□□ -0.03
RBM39-206ENST00000403542 MRE11P49959 708 aa14.89□□□□□ -0.03
RBM39-206ENST00000403542 PNPLA6Q8IY17 1366 aa14.89□□□□□ -0.03
RBM39-206ENST00000403542 PKP1Q13835 747 aa14.88□□□□□ -0.03
RBM39-206ENST00000403542 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
RBM39-206ENST00000403542 MYO5BQ9ULV0 1848 aa14.88□□□□□ -0.03
RBM39-206ENST00000403542 TSHZ3Q63HK5 1081 aa14.88□□□□□ -0.03
RBM39-206ENST00000403542 SULT6B1Q6IMI4 303 aa14.88□□□□□ -0.03
RBM39-206ENST00000403542 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
RBM39-206ENST00000403542 GBP4Q96PP9 640 aa14.88□□□□□ -0.03
RBM39-206ENST00000403542 DDIT3P35638 169 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 SLC4A10Q6U841 1118 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 COG3Q96JB2 828 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 ERBB4Q15303 1308 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 SNX21Q969T3 373 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 IFT57Q9NWB7 429 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 FAM135BQ49AJ0 1406 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 RAB3GAP1Q15042 981 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 CYB5RLQ6IPT4 315 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 PLEKHM2Q8IWE5 1019 aa14.87□□□□□ -0.03
RBM39-206ENST00000403542 CDC45O75419 566 aa14.86□□□□□ -0.03
RBM39-206ENST00000403542 NECTIN2Q92692 538 aa14.86□□□□□ -0.03
RBM39-206ENST00000403542 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
RBM39-206ENST00000403542 DDX49Q9Y6V7 483 aaKnown RBP14.86□□□□□ -0.03
RBM39-206ENST00000403542 MCTP1Q6DN14 999 aa14.85□□□□□ -0.03
RBM39-206ENST00000403542 NOL8Q76FK4 1167 aaKnown RBP14.85□□□□□ -0.03
RBM39-206ENST00000403542 NUDT16Q96DE0 195 aaKnown RBP14.85□□□□□ -0.03
RBM39-206ENST00000403542 TRIM44Q96DX7 344 aaPredicted RBP14.85□□□□□ -0.03
RBM39-206ENST00000403542 F6X3S4 739 aa14.84□□□□□ -0.03
RBM39-206ENST00000403542 TPRNQ4KMQ1 711 aa14.84□□□□□ -0.03
RBM39-206ENST00000403542 MEIS3Q99687 375 aa14.84□□□□□ -0.03
RBM39-206ENST00000403542 ABCC4O15439 1325 aa14.84□□□□□ -0.03
RBM39-206ENST00000403542 AK9Q5TCS8 1911 aa14.84□□□□□ -0.03
RBM39-206ENST00000403542 CALD1Q05682 793 aaKnown RBP14.84□□□□□ -0.03
RBM39-206ENST00000403542 WASLO00401 505 aaPredicted RBP14.83□□□□□ -0.03
RBM39-206ENST00000403542 FOXO3O43524 673 aa14.83□□□□□ -0.04
RBM39-206ENST00000403542 ZNF853P0CG23 659 aa14.83□□□□□ -0.04
RBM39-206ENST00000403542 FOXD4L6Q3SYB3 417 aaPredicted RBP14.83□□□□□ -0.04
RBM39-206ENST00000403542 FOXD4L3Q6VB84 417 aaPredicted RBP14.83□□□□□ -0.04
RBM39-206ENST00000403542 API5Q9BZZ5 524 aaKnown RBP14.83□□□□□ -0.04
RBM39-206ENST00000403542 ARHGEF40Q8TER5 1519 aa14.83□□□□□ -0.04
RBM39-206ENST00000403542 ZGPATQ8N5A5 531 aaKnown RBP14.83□□□□□ -0.04
RBM39-206ENST00000403542 ARHGAP45Q92619 1136 aa14.82□□□□□ -0.04
RBM39-206ENST00000403542 SDSP20132 328 aa14.82□□□□□ -0.04
RBM39-206ENST00000403542 HSP90AB2PQ58FF8 381 aa14.82□□□□□ -0.04
RBM39-206ENST00000403542 NCOA3Q9Y6Q9 1424 aa14.82□□□□□ -0.04
RBM39-206ENST00000403542 DIP2CQ9Y2E4 1556 aa14.82□□□□□ -0.04
RBM39-206ENST00000403542 ESPNB1AK53 854 aa14.81□□□□□ -0.04
RBM39-206ENST00000403542 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
RBM39-206ENST00000403542 ZFYVE9O95405 1425 aa14.81□□□□□ -0.04
RBM39-206ENST00000403542 BAG4O95429 457 aaKnown RBP14.81□□□□□ -0.04
RBM39-206ENST00000403542 TTC22Q5TAA0 569 aa14.81□□□□□ -0.04
RBM39-206ENST00000403542 CAVIN1Q6NZI2 390 aaKnown RBP14.81□□□□□ -0.04
RBM39-206ENST00000403542 ALKQ9UM73 1620 aa14.81□□□□□ -0.04
RBM39-206ENST00000403542 ZNF428Q96B54 188 aa14.8□□□□□ -0.04
RBM39-206ENST00000403542 EIF4A2Q14240 407 aaKnown RBP14.8□□□□□ -0.04
RBM39-206ENST00000403542 G2E3Q7L622 706 aa14.8□□□□□ -0.04
RBM39-206ENST00000403542 CHMP4BQ9H444 224 aaKnown RBP14.8□□□□□ -0.04
RBM39-206ENST00000403542 DCTPP1Q9H773 170 aa14.8□□□□□ -0.04
RBM39-206ENST00000403542 MED14O60244 1454 aa14.8□□□□□ -0.04
RBM39-206ENST00000403542 RIMS2Q9UQ26 1411 aa14.8□□□□□ -0.04
RBM39-206ENST00000403542 METP08581 1390 aa14.8□□□□□ -0.04
RBM39-206ENST00000403542 FAM69CQ0P6D2 419 aa14.79□□□□□ -0.04
RBM39-206ENST00000403542 MAP2P11137 1827 aaKnown RBP14.79□□□□□ -0.04
RBM39-206ENST00000403542 PTCH1Q13635 1447 aa14.79□□□□□ -0.04
RBM39-206ENST00000403542 GOLGA6L22H0YM25 854 aa14.79□□□□□ -0.04
RBM39-206ENST00000403542 CLCN1P35523 988 aa14.79□□□□□ -0.04
RBM39-206ENST00000403542 CIZ1Q9ULV3 898 aaPredicted RBP14.79□□□□□ -0.04
RBM39-206ENST00000403542 EXOC6BQ9Y2D4 811 aa14.79□□□□□ -0.04
RBM39-206ENST00000403542 MSH6P52701 1360 aa14.79□□□□□ -0.04
RBM39-206ENST00000403542 BRPF1P55201 1214 aaPredicted RBP14.79□□□□□ -0.04
RBM39-206ENST00000403542 CEP85Q6P2H3 762 aa14.79□□□□□ -0.04
RBM39-206ENST00000403542 RBM27Q9P2N5 1060 aaKnown RBP14.79□□□□□ -0.04
RBM39-206ENST00000403542 LMOD3Q0VAK6 560 aa14.78□□□□□ -0.04
RBM39-206ENST00000403542 USP26Q9BXU7 913 aa14.78□□□□□ -0.04
RBM39-206ENST00000403542 CCDC61Q9Y6R9 512 aa14.78□□□□□ -0.04
RBM39-206ENST00000403542 TMEM131LA2VDJ0 1609 aa14.77□□□□□ -0.04
RBM39-206ENST00000403542 ZBTB7CA1YPR0 619 aa14.77□□□□□ -0.04
RBM39-206ENST00000403542 PRPF40AO75400 957 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms