RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 KIF24Q5T7B8 1368 aa17.41■□□□□ 0.38
CEACAM1-206ENST00000403136 RIPK4P57078 832 aa17.4■□□□□ 0.38
CEACAM1-206ENST00000403136 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
CEACAM1-206ENST00000403136 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
CEACAM1-206ENST00000403136 TRIM35Q9UPQ4 493 aa17.4■□□□□ 0.38
CEACAM1-206ENST00000403136 USP54Q70EL1 1684 aa17.39■□□□□ 0.37
CEACAM1-206ENST00000403136 HOXC9P31274 260 aa17.39■□□□□ 0.37
CEACAM1-206ENST00000403136 LMOD2Q6P5Q4 547 aa17.39■□□□□ 0.37
CEACAM1-206ENST00000403136 PEAK1Q9H792 1746 aa17.39■□□□□ 0.37
CEACAM1-206ENST00000403136 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
CEACAM1-206ENST00000403136 SULT6B1Q6IMI4 303 aa17.38■□□□□ 0.37
CEACAM1-206ENST00000403136 NPHP3Q7Z494 1330 aa17.38■□□□□ 0.37
CEACAM1-206ENST00000403136 GCP02774 474 aa17.38■□□□□ 0.37
CEACAM1-206ENST00000403136 DDX17Q92841 729 aaKnown RBP17.38■□□□□ 0.37
CEACAM1-206ENST00000403136 SLAIN2Q9P270 581 aa17.38■□□□□ 0.37
CEACAM1-206ENST00000403136 NFE2L2Q16236 605 aa17.37■□□□□ 0.37
CEACAM1-206ENST00000403136 MARF1Q9Y4F3 1742 aaKnown RBP17.37■□□□□ 0.37
CEACAM1-206ENST00000403136 AEBP1Q8IUX7 1158 aa17.36■□□□□ 0.37
CEACAM1-206ENST00000403136 IP6K1Q92551 441 aa17.36■□□□□ 0.37
CEACAM1-206ENST00000403136 RRP1P56182 461 aaKnown RBP17.35■□□□□ 0.37
CEACAM1-206ENST00000403136 BRINP3Q76B58 766 aa17.35■□□□□ 0.37
CEACAM1-206ENST00000403136 XIRP1Q702N8 1843 aaKnown RBP17.35■□□□□ 0.37
CEACAM1-206ENST00000403136 USP19O94966 1318 aa17.35■□□□□ 0.37
CEACAM1-206ENST00000403136 EYA1Q99502 592 aa17.35■□□□□ 0.37
CEACAM1-206ENST00000403136 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
CEACAM1-206ENST00000403136 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
CEACAM1-206ENST00000403136 IL16Q14005 1332 aa17.34■□□□□ 0.37
CEACAM1-206ENST00000403136 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.37
CEACAM1-206ENST00000403136 ARHGEF10O15013 1369 aa17.33■□□□□ 0.36
CEACAM1-206ENST00000403136 TRPM3Q9HCF6 1732 aaPredicted RBP17.32■□□□□ 0.36
CEACAM1-206ENST00000403136 IGSF1Q8N6C5 1336 aa17.32■□□□□ 0.36
CEACAM1-206ENST00000403136 NFAT5O94916 1531 aa17.32■□□□□ 0.36
CEACAM1-206ENST00000403136 PLEKHG5O94827 1062 aa17.31■□□□□ 0.36
CEACAM1-206ENST00000403136 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
CEACAM1-206ENST00000403136 SLIT3O75094 1523 aa17.3■□□□□ 0.36
CEACAM1-206ENST00000403136 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
CEACAM1-206ENST00000403136 ZBTB7CA1YPR0 619 aa17.3■□□□□ 0.36
CEACAM1-206ENST00000403136 LMOD3Q0VAK6 560 aa17.3■□□□□ 0.36
CEACAM1-206ENST00000403136 KDRP35968 1356 aa17.29■□□□□ 0.36
CEACAM1-206ENST00000403136 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
CEACAM1-206ENST00000403136 CALD1Q05682 793 aaKnown RBP17.28■□□□□ 0.36
CEACAM1-206ENST00000403136 RGPD1P0DJD0 1748 aa17.28■□□□□ 0.36
CEACAM1-206ENST00000403136 PLIN1O60240 522 aa17.28■□□□□ 0.36
CEACAM1-206ENST00000403136 PXDNQ92626 1479 aa17.27■□□□□ 0.36
CEACAM1-206ENST00000403136 TNS3Q68CZ2 1445 aa17.27■□□□□ 0.36
CEACAM1-206ENST00000403136 SOS2Q07890 1332 aaPredicted RBP17.27■□□□□ 0.35
CEACAM1-206ENST00000403136 ZC3H6P61129 1189 aaKnown RBP17.26■□□□□ 0.35
CEACAM1-206ENST00000403136 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
CEACAM1-206ENST00000403136 FANCIQ9NVI1 1328 aa17.26■□□□□ 0.35
CEACAM1-206ENST00000403136 ALS2Q96Q42 1657 aa17.26■□□□□ 0.35
CEACAM1-206ENST00000403136 NBPF6Q5VWK0 638 aa17.25■□□□□ 0.35
CEACAM1-206ENST00000403136 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
CEACAM1-206ENST00000403136 NBPF4Q96M43 638 aa17.25■□□□□ 0.35
CEACAM1-206ENST00000403136 THUMPD2Q9BTF0 503 aaKnown RBP17.25■□□□□ 0.35
CEACAM1-206ENST00000403136 BCAR3O75815 825 aa17.24■□□□□ 0.35
CEACAM1-206ENST00000403136 CT47B1P0C2W7 299 aaPredicted RBP17.24■□□□□ 0.35
CEACAM1-206ENST00000403136 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
CEACAM1-206ENST00000403136 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
CEACAM1-206ENST00000403136 FAM83GA6ND36 823 aa17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 IFT57Q9NWB7 429 aa17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 MED1Q15648 1581 aaPredicted RBP17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 LTN1O94822 1766 aa17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 RARSP54136 660 aaKnown RBP17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 GNAI1P63096 354 aa17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
CEACAM1-206ENST00000403136 DCTN1Q14203 1278 aa17.22■□□□□ 0.35
CEACAM1-206ENST00000403136 ANKRD24Q8TF21 1146 aa17.22■□□□□ 0.35
CEACAM1-206ENST00000403136 PHRF1Q9P1Y6 1649 aaKnown RBP17.22■□□□□ 0.35
CEACAM1-206ENST00000403136 LAS1LQ9Y4W2 734 aaKnown RBP17.22■□□□□ 0.35
CEACAM1-206ENST00000403136 USHBP1Q8N6Y0 703 aa17.21■□□□□ 0.35
CEACAM1-206ENST00000403136 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
CEACAM1-206ENST00000403136 EXOC6Q8TAG9 804 aa17.2■□□□□ 0.34
CEACAM1-206ENST00000403136 LRRC59Q96AG4 307 aaKnown RBP17.2■□□□□ 0.34
CEACAM1-206ENST00000403136 HTATSF1O43719 755 aaKnown RBP17.19■□□□□ 0.34
CEACAM1-206ENST00000403136 C20orf194Q5TEA3 1177 aa17.19■□□□□ 0.34
CEACAM1-206ENST00000403136 MCM10Q7L590 875 aa17.18■□□□□ 0.34
CEACAM1-206ENST00000403136 RTF1Q92541 710 aaKnown RBP17.18■□□□□ 0.34
CEACAM1-206ENST00000403136 B4GALNT3Q6L9W6 998 aa17.17■□□□□ 0.34
CEACAM1-206ENST00000403136 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
CEACAM1-206ENST00000403136 LTBP4Q8N2S1 1624 aa17.17■□□□□ 0.34
CEACAM1-206ENST00000403136 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
CEACAM1-206ENST00000403136 CPDO75976 1380 aa17.16■□□□□ 0.34
CEACAM1-206ENST00000403136 DLG5Q8TDM6 1919 aa17.16■□□□□ 0.34
CEACAM1-206ENST00000403136 ERBB3P21860 1342 aa17.16■□□□□ 0.34
CEACAM1-206ENST00000403136 GNAT3A8MTJ3 354 aa17.15■□□□□ 0.34
CEACAM1-206ENST00000403136 CHL1O00533 1208 aa17.15■□□□□ 0.34
CEACAM1-206ENST00000403136 CHRNA2Q15822 529 aa17.15■□□□□ 0.34
CEACAM1-206ENST00000403136 KIAA0232Q92628 1395 aa17.14■□□□□ 0.34
CEACAM1-206ENST00000403136 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
CEACAM1-206ENST00000403136 ZNF428Q96B54 188 aa17.14■□□□□ 0.33
CEACAM1-206ENST00000403136 CCDC136Q96JN2 1154 aa17.14■□□□□ 0.33
CEACAM1-206ENST00000403136 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
CEACAM1-206ENST00000403136 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
CEACAM1-206ENST00000403136 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
CEACAM1-206ENST00000403136 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
CEACAM1-206ENST00000403136 FRAT1Q92837 279 aaPredicted RBP17.13■□□□□ 0.33
CEACAM1-206ENST00000403136 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms