RNA–Protein interactions for RNA: ENST00000402203.5

TNRC6B-203, Transcript of trinucleotide repeat containing 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNRC6B, Length 3,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-203ENST00000402203 APBB1O00213 710 aa16.9■□□□□ 0.3
TNRC6B-203ENST00000402203 NRXN3Q9Y4C0 1643 aa16.9■□□□□ 0.3
TNRC6B-203ENST00000402203 HDGFP51858 240 aaKnown RBP16.9■□□□□ 0.3
TNRC6B-203ENST00000402203 CPSF1Q10570 1443 aaKnown RBP16.9■□□□□ 0.3
TNRC6B-203ENST00000402203 TWISTNBQ3B726 338 aaPredicted RBP16.9■□□□□ 0.3
TNRC6B-203ENST00000402203 NGDNQ8NEJ9 315 aaKnown RBP16.9■□□□□ 0.3
TNRC6B-203ENST00000402203 DDX19BQ9UMR2 479 aa16.9■□□□□ 0.3
TNRC6B-203ENST00000402203 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
TNRC6B-203ENST00000402203 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
TNRC6B-203ENST00000402203 AGLP35573 1532 aa16.89■□□□□ 0.29
TNRC6B-203ENST00000402203 ZBTB40Q9NUA8 1239 aa16.89■□□□□ 0.29
TNRC6B-203ENST00000402203 PNNQ9H307 717 aaKnown RBP16.88■□□□□ 0.29
TNRC6B-203ENST00000402203 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
TNRC6B-203ENST00000402203 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
TNRC6B-203ENST00000402203 KIF13AQ9H1H9 1805 aa16.88■□□□□ 0.29
TNRC6B-203ENST00000402203 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
TNRC6B-203ENST00000402203 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
TNRC6B-203ENST00000402203 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
TNRC6B-203ENST00000402203 EID1Q9Y6B2 187 aa16.86■□□□□ 0.29
TNRC6B-203ENST00000402203 ADAMTS13Q76LX8 1427 aa16.86■□□□□ 0.29
TNRC6B-203ENST00000402203 PTPRUQ92729 1446 aa16.85■□□□□ 0.29
TNRC6B-203ENST00000402203 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
TNRC6B-203ENST00000402203 ATP7BP35670 1465 aa16.85■□□□□ 0.29
TNRC6B-203ENST00000402203 SETD1AO15047 1707 aaKnown RBP16.85■□□□□ 0.29
TNRC6B-203ENST00000402203 GNAI1P63096 354 aa16.84■□□□□ 0.29
TNRC6B-203ENST00000402203 IL16Q14005 1332 aa16.84■□□□□ 0.29
TNRC6B-203ENST00000402203 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
TNRC6B-203ENST00000402203 MED14O60244 1454 aa16.84■□□□□ 0.29
TNRC6B-203ENST00000402203 KCNA6P17658 529 aa16.83■□□□□ 0.28
TNRC6B-203ENST00000402203 ZNF692Q9BU19 519 aaPredicted RBP16.83■□□□□ 0.28
TNRC6B-203ENST00000402203 KIF16BQ96L93 1317 aa16.83■□□□□ 0.28
TNRC6B-203ENST00000402203 ZBTB7BO15156 539 aaPredicted RBP16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 NLRP6P59044 892 aa16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 SIRT2Q8IXJ6 389 aa16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 AMPHP49418 695 aa16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 XPCQ01831 940 aaPredicted RBP16.82■□□□□ 0.28
TNRC6B-203ENST00000402203 ANKRD26Q9UPS8 1709 aa16.81■□□□□ 0.28
TNRC6B-203ENST00000402203 IFT57Q9NWB7 429 aa16.81■□□□□ 0.28
TNRC6B-203ENST00000402203 ARXQ96QS3 562 aa16.81■□□□□ 0.28
TNRC6B-203ENST00000402203 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
TNRC6B-203ENST00000402203 DLC1Q96QB1 1528 aa16.8■□□□□ 0.28
TNRC6B-203ENST00000402203 ZNF853P0CG23 659 aa16.8■□□□□ 0.28
TNRC6B-203ENST00000402203 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.8■□□□□ 0.28
TNRC6B-203ENST00000402203 F6X3S4 739 aa16.8■□□□□ 0.28
TNRC6B-203ENST00000402203 MTHFSDQ2M296 383 aaKnown RBP16.8■□□□□ 0.28
TNRC6B-203ENST00000402203 C16orf71Q8IYS4 520 aaPredicted RBP16.8■□□□□ 0.28
TNRC6B-203ENST00000402203 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
TNRC6B-203ENST00000402203 SLC4A10Q6U841 1118 aa16.79■□□□□ 0.28
TNRC6B-203ENST00000402203 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
TNRC6B-203ENST00000402203 UPF2Q9HAU5 1272 aaKnown RBP16.79■□□□□ 0.28
TNRC6B-203ENST00000402203 TBC1D2Q9BYX2 928 aa16.78■□□□□ 0.28
TNRC6B-203ENST00000402203 G2E3Q7L622 706 aa16.78■□□□□ 0.28
TNRC6B-203ENST00000402203 SMC5Q8IY18 1101 aa16.78■□□□□ 0.28
TNRC6B-203ENST00000402203 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.28
TNRC6B-203ENST00000402203 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
TNRC6B-203ENST00000402203 REREQ9P2R6 1566 aa16.77■□□□□ 0.28
TNRC6B-203ENST00000402203 SETD1BQ9UPS6 1966 aaKnown RBP16.77■□□□□ 0.28
TNRC6B-203ENST00000402203 TBC1D32Q96NH3 1257 aa16.77■□□□□ 0.27
TNRC6B-203ENST00000402203 EYA1Q99502 592 aa16.77■□□□□ 0.27
TNRC6B-203ENST00000402203 FOXD4L1Q9NU39 408 aa16.77■□□□□ 0.27
TNRC6B-203ENST00000402203 SMARCA5O60264 1052 aaPredicted RBP16.76■□□□□ 0.27
TNRC6B-203ENST00000402203 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
TNRC6B-203ENST00000402203 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
TNRC6B-203ENST00000402203 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
TNRC6B-203ENST00000402203 LMOD2Q6P5Q4 547 aa16.76■□□□□ 0.27
TNRC6B-203ENST00000402203 ABTB2Q8N961 1025 aa16.76■□□□□ 0.27
TNRC6B-203ENST00000402203 OTUD7AQ8TE49 926 aaPredicted RBP16.76■□□□□ 0.27
TNRC6B-203ENST00000402203 PLEKHG3A1L390 1219 aa16.75■□□□□ 0.27
TNRC6B-203ENST00000402203 NUCB1Q02818 461 aa16.75■□□□□ 0.27
TNRC6B-203ENST00000402203 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
TNRC6B-203ENST00000402203 UBR1Q8IWV7 1749 aa16.75■□□□□ 0.27
TNRC6B-203ENST00000402203 CDK12Q9NYV4 1490 aaPredicted RBP16.75■□□□□ 0.27
TNRC6B-203ENST00000402203 AATKQ6ZMQ8 1374 aa16.75■□□□□ 0.27
TNRC6B-203ENST00000402203 USP6P35125 1406 aa16.74■□□□□ 0.27
TNRC6B-203ENST00000402203 DLG5Q8TDM6 1919 aa16.74■□□□□ 0.27
TNRC6B-203ENST00000402203 IL27Q8NEV9 243 aa16.74■□□□□ 0.27
TNRC6B-203ENST00000402203 CALD1Q05682 793 aaKnown RBP16.74■□□□□ 0.27
TNRC6B-203ENST00000402203 TSPYL4Q9UJ04 414 aa16.73■□□□□ 0.27
TNRC6B-203ENST00000402203 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
TNRC6B-203ENST00000402203 MEIS3Q99687 375 aa16.73■□□□□ 0.27
TNRC6B-203ENST00000402203 LMOD3Q0VAK6 560 aa16.72■□□□□ 0.27
TNRC6B-203ENST00000402203 AAMPQ13685 434 aa16.72■□□□□ 0.27
TNRC6B-203ENST00000402203 THEMISQ8N1K5 641 aaPredicted RBP16.72■□□□□ 0.27
TNRC6B-203ENST00000402203 RTF1Q92541 710 aaKnown RBP16.72■□□□□ 0.27
TNRC6B-203ENST00000402203 SIRT1Q96EB6 747 aa16.72■□□□□ 0.27
TNRC6B-203ENST00000402203 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
TNRC6B-203ENST00000402203 RIMS1Q86UR5 1692 aaKnown RBP16.72■□□□□ 0.27
TNRC6B-203ENST00000402203 TECPR2O15040 1411 aa16.71■□□□□ 0.27
TNRC6B-203ENST00000402203 RGPD8O14715 1765 aaPredicted RBP16.71■□□□□ 0.27
TNRC6B-203ENST00000402203 CHL1O00533 1208 aa16.7■□□□□ 0.26
TNRC6B-203ENST00000402203 BECN1Q14457 450 aa16.7■□□□□ 0.26
TNRC6B-203ENST00000402203 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
TNRC6B-203ENST00000402203 ABCC4O15439 1325 aa16.69■□□□□ 0.26
TNRC6B-203ENST00000402203 TBX22Q9Y458 520 aa16.69■□□□□ 0.26
TNRC6B-203ENST00000402203 ESCO1Q5FWF5 840 aa16.68■□□□□ 0.26
TNRC6B-203ENST00000402203 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
TNRC6B-203ENST00000402203 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms