RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 C14orf93Q9H972 538 aaKnown RBP8.16□□□□□ -1.1
CLIP4-202ENST00000401605 SPINK5Q9NQ38 1064 aaPredicted RBP8.16□□□□□ -1.1
CLIP4-202ENST00000401605 AFF2P51816 1311 aa8.16□□□□□ -1.1
CLIP4-202ENST00000401605 ZNF592Q92610 1267 aa8.15□□□□□ -1.1
CLIP4-202ENST00000401605 SGIP1Q9BQI5 828 aa8.15□□□□□ -1.1
CLIP4-202ENST00000401605 YTHDC2Q9H6S0 1430 aaKnown RBP8.15□□□□□ -1.1
CLIP4-202ENST00000401605 GPIHBP1Q8IV16 184 aa8.15□□□□□ -1.1
CLIP4-202ENST00000401605 RBM19Q9Y4C8 960 aaKnown RBP8.15□□□□□ -1.1
CLIP4-202ENST00000401605 SHPRHQ149N8 1683 aa8.14□□□□□ -1.11
CLIP4-202ENST00000401605 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
CLIP4-202ENST00000401605 DIEXFQ68CQ4 756 aaKnown RBP8.14□□□□□ -1.11
CLIP4-202ENST00000401605 CCER1Q8TC90 406 aaPredicted RBP8.14□□□□□ -1.11
CLIP4-202ENST00000401605 DHX57Q6P158 1386 aaKnown RBP8.14□□□□□ -1.11
CLIP4-202ENST00000401605 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
CLIP4-202ENST00000401605 FOXO3O43524 673 aa8.14□□□□□ -1.11
CLIP4-202ENST00000401605 RRP9O43818 475 aaKnown RBP8.14□□□□□ -1.11
CLIP4-202ENST00000401605 ADAMTS2O95450 1211 aa8.14□□□□□ -1.11
CLIP4-202ENST00000401605 SMYD5Q6GMV2 418 aa8.14□□□□□ -1.11
CLIP4-202ENST00000401605 NGLY1Q96IV0 654 aa8.14□□□□□ -1.11
CLIP4-202ENST00000401605 SETD1AO15047 1707 aaKnown RBP8.13□□□□□ -1.11
CLIP4-202ENST00000401605 NALCNQ8IZF0 1738 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 MYOM2P54296 1465 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 NRXN1Q9ULB1 1477 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 CDC42BPGQ6DT37 1551 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 NUTM2FA1L443 756 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 STAC3Q96MF2 364 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 PSMD1Q99460 953 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 NHSL1Q5SYE7 1610 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 CCDC97Q96F63 343 aaPredicted RBP8.13□□□□□ -1.11
CLIP4-202ENST00000401605 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
CLIP4-202ENST00000401605 PPLO60437 1756 aa8.13□□□□□ -1.11
CLIP4-202ENST00000401605 GTF2E1P29083 439 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-202ENST00000401605 RBM6P78332 1123 aaKnown RBP8.12□□□□□ -1.11
CLIP4-202ENST00000401605 FAM177A1Q8N128 213 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-202ENST00000401605 POM121Q96HA1 1249 aa8.12□□□□□ -1.11
CLIP4-202ENST00000401605 SSUH2Q9Y2M2 353 aa8.12□□□□□ -1.11
CLIP4-202ENST00000401605 CDK12Q9NYV4 1490 aaPredicted RBP8.12□□□□□ -1.11
CLIP4-202ENST00000401605 MCM6Q14566 821 aa8.12□□□□□ -1.11
CLIP4-202ENST00000401605 PRAM1Q96QH2 718 aa8.12□□□□□ -1.11
CLIP4-202ENST00000401605 PRDM10Q9NQV6 1147 aa8.12□□□□□ -1.11
CLIP4-202ENST00000401605 PTMAP06454 111 aaKnown RBP8.11□□□□□ -1.11
CLIP4-202ENST00000401605 XPCQ01831 940 aaPredicted RBP8.11□□□□□ -1.11
CLIP4-202ENST00000401605 WWC1Q8IX03 1113 aa8.11□□□□□ -1.11
CLIP4-202ENST00000401605 FNBP4Q8N3X1 1017 aaPredicted RBP8.11□□□□□ -1.11
CLIP4-202ENST00000401605 PLCD4Q9BRC7 762 aa8.11□□□□□ -1.11
CLIP4-202ENST00000401605 POGKQ9P215 609 aa8.11□□□□□ -1.11
CLIP4-202ENST00000401605 SERPINA10Q9UK55 444 aa8.11□□□□□ -1.11
CLIP4-202ENST00000401605 C11orf95C9JLR9 678 aaPredicted RBP8.11□□□□□ -1.11
CLIP4-202ENST00000401605 PTMSP20962 102 aa8.11□□□□□ -1.11
CLIP4-202ENST00000401605 DCAF11Q8TEB1 546 aa8.11□□□□□ -1.11
CLIP4-202ENST00000401605 UPF1Q92900 1129 aaKnown RBP eCLIP8.11□□□□□ -1.11
CLIP4-202ENST00000401605 USP21Q9UK80 565 aa8.11□□□□□ -1.11
CLIP4-202ENST00000401605 TRPC5Q9UL62 973 aaPredicted RBP8.11□□□□□ -1.11
CLIP4-202ENST00000401605 LAMC1P11047 1609 aa8.1□□□□□ -1.11
CLIP4-202ENST00000401605 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
CLIP4-202ENST00000401605 SAFB2Q14151 953 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLIP4-202ENST00000401605 PXDNQ92626 1479 aa8.1□□□□□ -1.11
CLIP4-202ENST00000401605 CACNB1Q02641 598 aaPredicted RBP8.09□□□□□ -1.11
CLIP4-202ENST00000401605 PSME1Q06323 249 aa8.09□□□□□ -1.11
CLIP4-202ENST00000401605 GRIPAP1Q4V328 841 aa8.09□□□□□ -1.11
CLIP4-202ENST00000401605 PHF8Q9UPP1 1060 aa8.09□□□□□ -1.11
CLIP4-202ENST00000401605 SPATA31A3Q5VYP0 1347 aa8.09□□□□□ -1.11
CLIP4-202ENST00000401605 KRT28Q7Z3Y7 464 aa8.09□□□□□ -1.11
CLIP4-202ENST00000401605 NEFMP07197 916 aa8.08□□□□□ -1.12
CLIP4-202ENST00000401605 DDRGK1Q96HY6 314 aa8.08□□□□□ -1.12
CLIP4-202ENST00000401605 TRAK1Q9UPV9 953 aa8.08□□□□□ -1.12
CLIP4-202ENST00000401605 DLC1Q96QB1 1528 aa8.08□□□□□ -1.12
CLIP4-202ENST00000401605 MCCP23508 829 aa8.08□□□□□ -1.12
CLIP4-202ENST00000401605 HSP90AA2PQ14568 343 aaPredicted RBP8.08□□□□□ -1.12
CLIP4-202ENST00000401605 RGS12O14924 1447 aa8.08□□□□□ -1.12
CLIP4-202ENST00000401605 ANKARQ7Z5J8 1434 aa8.07□□□□□ -1.12
CLIP4-202ENST00000401605 PPP1R37O75864 691 aa8.07□□□□□ -1.12
CLIP4-202ENST00000401605 IFT172Q9UG01 1749 aa8.07□□□□□ -1.12
CLIP4-202ENST00000401605 SBNO1A3KN83 1393 aa8.06□□□□□ -1.12
CLIP4-202ENST00000401605 EIF3AQ14152 1382 aaKnown RBP8.06□□□□□ -1.12
CLIP4-202ENST00000401605 KNDC1Q76NI1 1749 aa8.06□□□□□ -1.12
CLIP4-202ENST00000401605 ADGRB1O14514 1584 aa8.06□□□□□ -1.12
CLIP4-202ENST00000401605 ATRNO75882 1429 aa8.06□□□□□ -1.12
CLIP4-202ENST00000401605 CALD1Q05682 793 aaKnown RBP8.06□□□□□ -1.12
CLIP4-202ENST00000401605 TMED8Q6PL24 325 aaPredicted RBP8.06□□□□□ -1.12
CLIP4-202ENST00000401605 HIRIP3Q9BW71 556 aaPredicted RBP8.06□□□□□ -1.12
CLIP4-202ENST00000401605 TNS3Q68CZ2 1445 aa8.06□□□□□ -1.12
CLIP4-202ENST00000401605 SETQ01105 290 aaPredicted RBP8.06□□□□□ -1.12
CLIP4-202ENST00000401605 PMFBP1Q8TBY8 1022 aa8.06□□□□□ -1.12
CLIP4-202ENST00000401605 ARHGEF10O15013 1369 aa8.05□□□□□ -1.12
CLIP4-202ENST00000401605 MINK1Q8N4C8 1332 aaPredicted RBP8.05□□□□□ -1.12
CLIP4-202ENST00000401605 WASLO00401 505 aaPredicted RBP8.05□□□□□ -1.12
CLIP4-202ENST00000401605 UNC5CLQ8IV45 518 aa8.05□□□□□ -1.12
CLIP4-202ENST00000401605 BCL9LQ86UU0 1499 aa8.05□□□□□ -1.12
CLIP4-202ENST00000401605 COL22A1Q8NFW1 1626 aaPredicted RBP8.05□□□□□ -1.12
CLIP4-202ENST00000401605 GJD4Q96KN9 370 aaPredicted RBP8.04□□□□□ -1.12
CLIP4-202ENST00000401605 ATAD2Q6PL18 1390 aa8.04□□□□□ -1.12
CLIP4-202ENST00000401605 GPRASP1Q5JY77 1395 aa8.04□□□□□ -1.12
CLIP4-202ENST00000401605 PARP9Q8IXQ6 854 aa8.04□□□□□ -1.12
CLIP4-202ENST00000401605 MFRPQ9BY79 579 aa8.04□□□□□ -1.12
CLIP4-202ENST00000401605 PYGBP11216 843 aa8.03□□□□□ -1.12
CLIP4-202ENST00000401605 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
CLIP4-202ENST00000401605 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
CLIP4-202ENST00000401605 NGDNQ8NEJ9 315 aaKnown RBP8.03□□□□□ -1.12
CLIP4-202ENST00000401605 CABLES1Q8TDN4 633 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms