RNA–Protein interactions for RNA: ENST00000400946.2

LINC01139-201, Transcript of long intergenic non-protein coding RNA 1139, humanhuman

TSL 1 (best) BASIC

Gene LINC01139, Length 1,537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01139-201ENST00000400946 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.13□□□□□ -0.63
LINC01139-201ENST00000400946 FRAT1Q92837 279 aaPredicted RBP11.13□□□□□ -0.63
LINC01139-201ENST00000400946 RRP7AQ9Y3A4 280 aaKnown RBP11.13□□□□□ -0.63
LINC01139-201ENST00000400946 AATKQ6ZMQ8 1374 aa11.13□□□□□ -0.63
LINC01139-201ENST00000400946 FAM135BQ49AJ0 1406 aa11.12□□□□□ -0.63
LINC01139-201ENST00000400946 HDGFP51858 240 aaKnown RBP11.12□□□□□ -0.63
LINC01139-201ENST00000400946 NEUROD2Q15784 382 aa11.12□□□□□ -0.63
LINC01139-201ENST00000400946 PCDH10Q9P2E7 1040 aa11.12□□□□□ -0.63
LINC01139-201ENST00000400946 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
LINC01139-201ENST00000400946 USP19O94966 1318 aa11.12□□□□□ -0.63
LINC01139-201ENST00000400946 EDC4Q6P2E9 1401 aaKnown RBP11.12□□□□□ -0.63
LINC01139-201ENST00000400946 FBXO31Q5XUX0 539 aaPredicted RBP11.11□□□□□ -0.63
LINC01139-201ENST00000400946 ATF7IPQ6VMQ6 1270 aa11.11□□□□□ -0.63
LINC01139-201ENST00000400946 KLHL34Q8N239 644 aa11.11□□□□□ -0.63
LINC01139-201ENST00000400946 CDK19Q9BWU1 502 aa11.11□□□□□ -0.63
LINC01139-201ENST00000400946 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
LINC01139-201ENST00000400946 TECPR2O15040 1411 aa11.11□□□□□ -0.63
LINC01139-201ENST00000400946 CPSF1Q10570 1443 aaKnown RBP11.11□□□□□ -0.63
LINC01139-201ENST00000400946 CDK12Q9NYV4 1490 aaPredicted RBP11.11□□□□□ -0.63
LINC01139-201ENST00000400946 NFKBIBQ15653 356 aa11.1□□□□□ -0.63
LINC01139-201ENST00000400946 SKAP1Q86WV1 359 aa11.1□□□□□ -0.63
LINC01139-201ENST00000400946 FTSJ3Q8IY81 847 aaKnown RBP11.1□□□□□ -0.63
LINC01139-201ENST00000400946 ARHGAP45Q92619 1136 aa11.1□□□□□ -0.63
LINC01139-201ENST00000400946 LAS1LQ9Y4W2 734 aaKnown RBP11.1□□□□□ -0.63
LINC01139-201ENST00000400946 RIMS2Q9UQ26 1411 aa11.1□□□□□ -0.63
LINC01139-201ENST00000400946 RLBP1P12271 317 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 SMC5Q8IY18 1101 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 STK26Q9P289 416 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 PDZRN3Q9UPQ7 1066 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 STRCQ7RTU9 1775 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 U2SURPO15042 1029 aaKnown RBP11.09□□□□□ -0.63
LINC01139-201ENST00000400946 ZNF142P52746 1687 aaPredicted RBP11.09□□□□□ -0.63
LINC01139-201ENST00000400946 EXOSC9Q06265 439 aaKnown RBP11.09□□□□□ -0.63
LINC01139-201ENST00000400946 MON2Q7Z3U7 1717 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
LINC01139-201ENST00000400946 LRRC7Q96NW7 1537 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 SMC4Q9NTJ3 1288 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 STAG3Q9UJ98 1225 aa11.09□□□□□ -0.63
LINC01139-201ENST00000400946 CPS1P31327 1500 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 TNRQ92752 1358 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 PIK3R4Q99570 1358 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 RIPK4P57078 832 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 LMOD3Q0VAK6 560 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 GSE1Q14687 1217 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 TBC1D32Q96NH3 1257 aa11.08□□□□□ -0.64
LINC01139-201ENST00000400946 NRXN3Q9Y4C0 1643 aa11.07□□□□□ -0.64
LINC01139-201ENST00000400946 CEP170BQ9Y4F5 1589 aaPredicted RBP11.07□□□□□ -0.64
LINC01139-201ENST00000400946 KIF24Q5T7B8 1368 aa11.07□□□□□ -0.64
LINC01139-201ENST00000400946 TRIM27P14373 513 aa11.07□□□□□ -0.64
LINC01139-201ENST00000400946 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
LINC01139-201ENST00000400946 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
LINC01139-201ENST00000400946 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
LINC01139-201ENST00000400946 RSPH6AQ9H0K4 717 aa11.07□□□□□ -0.64
LINC01139-201ENST00000400946 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
LINC01139-201ENST00000400946 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
LINC01139-201ENST00000400946 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
LINC01139-201ENST00000400946 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
LINC01139-201ENST00000400946 ZBTB40Q9NUA8 1239 aa11.06□□□□□ -0.64
LINC01139-201ENST00000400946 CABP1Q9NZU7 370 aa11.06□□□□□ -0.64
LINC01139-201ENST00000400946 GNAI1P63096 354 aa11.05□□□□□ -0.64
LINC01139-201ENST00000400946 NFE2L2Q16236 605 aa11.05□□□□□ -0.64
LINC01139-201ENST00000400946 POTEGQ6S5H5 508 aa11.05□□□□□ -0.64
LINC01139-201ENST00000400946 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
LINC01139-201ENST00000400946 POLKQ9UBT6 870 aa11.05□□□□□ -0.64
LINC01139-201ENST00000400946 PTCH1Q13635 1447 aa11.05□□□□□ -0.64
LINC01139-201ENST00000400946 WASLO00401 505 aaPredicted RBP11.04□□□□□ -0.64
LINC01139-201ENST00000400946 SAFB2Q14151 953 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC01139-201ENST00000400946 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
LINC01139-201ENST00000400946 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
LINC01139-201ENST00000400946 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
LINC01139-201ENST00000400946 ZNF853P0CG23 659 aa11.03□□□□□ -0.64
LINC01139-201ENST00000400946 TSR2Q969E8 191 aaKnown RBP11.03□□□□□ -0.64
LINC01139-201ENST00000400946 GCC1Q96CN9 775 aa11.03□□□□□ -0.64
LINC01139-201ENST00000400946 BCL2L13Q9BXK5 485 aa11.03□□□□□ -0.64
LINC01139-201ENST00000400946 NOB1Q9ULX3 412 aaKnown RBP11.03□□□□□ -0.64
LINC01139-201ENST00000400946 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
LINC01139-201ENST00000400946 IL13P35225 146 aa11.02□□□□□ -0.65
LINC01139-201ENST00000400946 NCKAP5LQ9HCH0 1330 aa11.01□□□□□ -0.65
LINC01139-201ENST00000400946 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
LINC01139-201ENST00000400946 NUCB1Q02818 461 aa11.01□□□□□ -0.65
LINC01139-201ENST00000400946 ITPRIPQ8IWB1 547 aa11.01□□□□□ -0.65
LINC01139-201ENST00000400946 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
LINC01139-201ENST00000400946 SEC24BO95487 1268 aa11□□□□□ -0.65
LINC01139-201ENST00000400946 THEMISQ8N1K5 641 aaPredicted RBP11□□□□□ -0.65
LINC01139-201ENST00000400946 TMEM57Q8N5G2 664 aa11□□□□□ -0.65
LINC01139-201ENST00000400946 ANTXR1Q9H6X2 564 aa11□□□□□ -0.65
LINC01139-201ENST00000400946 VAMP4O75379 141 aa10.99□□□□□ -0.65
LINC01139-201ENST00000400946 SLC4A3P48751 1232 aa10.99□□□□□ -0.65
LINC01139-201ENST00000400946 COG3Q96JB2 828 aa10.99□□□□□ -0.65
LINC01139-201ENST00000400946 API5Q9BZZ5 524 aaKnown RBP10.99□□□□□ -0.65
LINC01139-201ENST00000400946 TOPAZ1Q8N9V7 1692 aa10.99□□□□□ -0.65
LINC01139-201ENST00000400946 UBR1Q8IWV7 1749 aa10.99□□□□□ -0.65
LINC01139-201ENST00000400946 RBM25P49756 843 aaKnown RBP10.99□□□□□ -0.65
LINC01139-201ENST00000400946 BMP2KLQ5H9B9 411 aa10.99□□□□□ -0.65
LINC01139-201ENST00000400946 MRPL50Q8N5N7 158 aaKnown RBP10.99□□□□□ -0.65
LINC01139-201ENST00000400946 NUDT16Q96DE0 195 aaKnown RBP10.99□□□□□ -0.65
LINC01139-201ENST00000400946 C22orf23Q9BZE7 217 aa10.99□□□□□ -0.65
LINC01139-201ENST00000400946 ABCC4O15439 1325 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms