RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 C6orf229H3BNL8 230 aa16.58■□□□□ 0.24
CACNA1C-211ENST00000399617 ZNF76P36508 570 aa16.58■□□□□ 0.24
CACNA1C-211ENST00000399617 NINLQ9Y2I6 1382 aa16.58■□□□□ 0.24
CACNA1C-211ENST00000399617 TMOD2Q9NZR1 351 aa16.58■□□□□ 0.24
CACNA1C-211ENST00000399617 EXOC5O00471 708 aa16.58■□□□□ 0.24
CACNA1C-211ENST00000399617 ATP6V1DQ9Y5K8 247 aa16.58■□□□□ 0.24
CACNA1C-211ENST00000399617 FMNL2Q96PY5 1086 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 RRBP1Q9P2E9 1410 aaKnown RBP16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 SCLT1Q96NL6 688 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 ZNF692Q9BU19 519 aaPredicted RBP16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 NME9Q86XW9 330 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 OFD1O75665 1012 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 CCDC69A6NI79 296 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 METTL24Q5JXM2 366 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 PLCD3Q8N3E9 789 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 GNAI2P04899 355 aa16.57■□□□□ 0.24
CACNA1C-211ENST00000399617 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.56■□□□□ 0.24
CACNA1C-211ENST00000399617 CA8P35219 290 aa16.56■□□□□ 0.24
CACNA1C-211ENST00000399617 TNNT3P45378 269 aaPredicted RBP16.56■□□□□ 0.24
CACNA1C-211ENST00000399617 IPO9Q96P70 1041 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-211ENST00000399617 IPO7O95373 1038 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-211ENST00000399617 CABLES1Q8TDN4 633 aa16.56■□□□□ 0.24
CACNA1C-211ENST00000399617 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
CACNA1C-211ENST00000399617 CD109Q6YHK3 1445 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 GNAI3P08754 354 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 NUTM1Q86Y26 1132 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 HOMER1Q86YM7 354 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 MINDY4BA8MYZ0 360 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 SRCIN1Q9C0H9 1055 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 SASS6Q6UVJ0 657 aa16.55■□□□□ 0.24
CACNA1C-211ENST00000399617 C9orf84Q5VXU9 1444 aa16.54■□□□□ 0.24
CACNA1C-211ENST00000399617 LIG1P18858 919 aa16.54■□□□□ 0.24
CACNA1C-211ENST00000399617 RBM26Q5T8P6 1007 aaKnown RBP16.54■□□□□ 0.24
CACNA1C-211ENST00000399617 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
CACNA1C-211ENST00000399617 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
CACNA1C-211ENST00000399617 CCDC73Q6ZRK6 1079 aa16.53■□□□□ 0.24
CACNA1C-211ENST00000399617 FBLN1P23142 703 aa16.53■□□□□ 0.24
CACNA1C-211ENST00000399617 TRMT112Q9UI30 125 aaKnown RBP16.53■□□□□ 0.24
CACNA1C-211ENST00000399617 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
CACNA1C-211ENST00000399617 SRGAP3O43295 1099 aa16.52■□□□□ 0.24
CACNA1C-211ENST00000399617 RFC4P35249 363 aa16.52■□□□□ 0.24
CACNA1C-211ENST00000399617 GNAT3A8MTJ3 354 aa16.52■□□□□ 0.24
CACNA1C-211ENST00000399617 IFT140Q96RY7 1462 aa16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 PIP4K2AP48426 406 aaPredicted RBP16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 PDCL3Q9H2J4 239 aa16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 SLC52A1Q9NWF4 448 aa16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 C16orf71Q8IYS4 520 aaPredicted RBP16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 TTC16Q8NEE8 873 aa16.51■□□□□ 0.23
CACNA1C-211ENST00000399617 ZNF652Q9Y2D9 606 aa16.5■□□□□ 0.23
CACNA1C-211ENST00000399617 CWC27Q6UX04 472 aaKnown RBP16.5■□□□□ 0.23
CACNA1C-211ENST00000399617 CEP126Q9P2H0 1117 aa16.5■□□□□ 0.23
CACNA1C-211ENST00000399617 SDF4Q9BRK5 362 aa16.5■□□□□ 0.23
CACNA1C-211ENST00000399617 CCDC82Q8N4S0 544 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 PSMA5P28066 241 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 TANGO6Q9C0B7 1094 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 CDC45O75419 566 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 DZIP1Q86YF9 867 aaKnown RBP16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 TMEM87AQ8NBN3 555 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 SEPT11Q9NVA2 429 aaKnown RBP16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 OLFM4Q6UX06 510 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 DDX11L8A8MPP1 907 aa16.49■□□□□ 0.23
CACNA1C-211ENST00000399617 ATP5J2-PTCD1G3V325 749 aa16.48■□□□□ 0.23
CACNA1C-211ENST00000399617 EMILIN1Q9Y6C2 1016 aa16.48■□□□□ 0.23
CACNA1C-211ENST00000399617 NEK4P51957 841 aa16.48■□□□□ 0.23
CACNA1C-211ENST00000399617 DHX8Q14562 1220 aaKnown RBP16.48■□□□□ 0.23
CACNA1C-211ENST00000399617 CUX1P39880 1505 aa16.48■□□□□ 0.23
CACNA1C-211ENST00000399617 TOM1O60784 492 aa16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 C22orf23Q9BZE7 217 aa16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 CCDC96Q2M329 555 aa16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 ARHGEF11O15085 1522 aa16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 SMARCA5O60264 1052 aaPredicted RBP16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
CACNA1C-211ENST00000399617 KCNH5Q8NCM2 988 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 RNF214Q8ND24 703 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 VTI1AQ96AJ9 217 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 AIDAQ96BJ3 306 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 UBAC1Q9BSL1 405 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 ERC1Q8IUD2 1116 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 LRRCC1Q9C099 1032 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 MKNK2Q9HBH9 465 aa16.46■□□□□ 0.23
CACNA1C-211ENST00000399617 SYCP1Q15431 976 aa16.46■□□□□ 0.22
CACNA1C-211ENST00000399617 NBPF8Q3BBV2 869 aa16.46■□□□□ 0.22
CACNA1C-211ENST00000399617 CCDC70Q6NSX1 233 aa16.46■□□□□ 0.22
CACNA1C-211ENST00000399617 F6X3S4 739 aa16.45■□□□□ 0.22
CACNA1C-211ENST00000399617 DMRT2Q9Y5R5 561 aa16.45■□□□□ 0.22
CACNA1C-211ENST00000399617 WDHD1O75717 1129 aaPredicted RBP16.45■□□□□ 0.22
CACNA1C-211ENST00000399617 PDZRN3Q9UPQ7 1066 aa16.45■□□□□ 0.22
CACNA1C-211ENST00000399617 SMC2O95347 1197 aa16.44■□□□□ 0.22
CACNA1C-211ENST00000399617 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
CACNA1C-211ENST00000399617 ZBED9Q6R2W3 1325 aa16.44■□□□□ 0.22
CACNA1C-211ENST00000399617 MPNDQ8N594 471 aa16.44■□□□□ 0.22
CACNA1C-211ENST00000399617 CCDC61Q9Y6R9 512 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms