RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 GAS2L2Q8NHY3 880 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 STAC3Q96MF2 364 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 API5Q9BZZ5 524 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 NF2P35240 595 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 LIG1P18858 919 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 OLFM4Q6UX06 510 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 CWC15Q9P013 229 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 HSP90B2PQ58FF3 399 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 ZNF530Q6P9A1 599 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 TSPYL1Q9H0U9 437 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 SIL1Q9H173 461 aa13.04□□□□□ -0.32
CACNA1C-210ENST00000399606 C6orf229H3BNL8 230 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 MYO1BO43795 1136 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 CBX1P83916 185 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 LRP2BPQ9P2M1 347 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 MYO6Q9UM54 1294 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 CCDC69A6NI79 296 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 CCDC30Q5VVM6 783 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 BRD4O60885 1362 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 CASKIN1Q8WXD9 1431 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 PDILTQ8N807 584 aa13.03□□□□□ -0.32
CACNA1C-210ENST00000399606 TOP2BQ02880 1626 aa13.02□□□□□ -0.32
CACNA1C-210ENST00000399606 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.32
CACNA1C-210ENST00000399606 HFM1A2PYH4 1435 aa13.02□□□□□ -0.32
CACNA1C-210ENST00000399606 TIAM1Q13009 1591 aa13.02□□□□□ -0.32
CACNA1C-210ENST00000399606 NINLQ9Y2I6 1382 aa13.02□□□□□ -0.32
CACNA1C-210ENST00000399606 IL27Q8NEV9 243 aa13.02□□□□□ -0.32
CACNA1C-210ENST00000399606 TANGO6Q9C0B7 1094 aa13.02□□□□□ -0.32
CACNA1C-210ENST00000399606 SSR1P43307 286 aaKnown RBP13.02□□□□□ -0.33
CACNA1C-210ENST00000399606 SASS6Q6UVJ0 657 aa13.02□□□□□ -0.33
CACNA1C-210ENST00000399606 MYOM3Q5VTT5 1437 aa13.02□□□□□ -0.33
CACNA1C-210ENST00000399606 RFC4P35249 363 aa13.02□□□□□ -0.33
CACNA1C-210ENST00000399606 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.33
CACNA1C-210ENST00000399606 LMOD1P29536 600 aaPredicted RBP13.01□□□□□ -0.33
CACNA1C-210ENST00000399606 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
CACNA1C-210ENST00000399606 TDO2P48775 406 aa13.01□□□□□ -0.33
CACNA1C-210ENST00000399606 SMC3Q9UQE7 1217 aa13.01□□□□□ -0.33
CACNA1C-210ENST00000399606 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
CACNA1C-210ENST00000399606 SERPINA10Q9UK55 444 aa13.01□□□□□ -0.33
CACNA1C-210ENST00000399606 FKBP4Q02790 459 aaKnown RBP eCLIP13□□□□□ -0.33
CACNA1C-210ENST00000399606 CHMP5Q9NZZ3 219 aa13□□□□□ -0.33
CACNA1C-210ENST00000399606 NOP2P46087 812 aaKnown RBP13□□□□□ -0.33
CACNA1C-210ENST00000399606 ERCC4Q92889 916 aaPredicted RBP13□□□□□ -0.33
CACNA1C-210ENST00000399606 ABCF2Q9UG63 623 aa13□□□□□ -0.33
CACNA1C-210ENST00000399606 BRPF1P55201 1214 aaPredicted RBP13□□□□□ -0.33
CACNA1C-210ENST00000399606 GNAI1P63096 354 aa13□□□□□ -0.33
CACNA1C-210ENST00000399606 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
CACNA1C-210ENST00000399606 PTCD1O75127 700 aaKnown RBP13□□□□□ -0.33
CACNA1C-210ENST00000399606 SEPT7Q16181 437 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 CCDC96Q2M329 555 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 TAX1BP1Q86VP1 789 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 MPHOSPH6Q99547 160 aaKnown RBP12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 ST5P78524 1137 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 CCDC73Q6ZRK6 1079 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 CNTROBQ8N137 903 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 IFT57Q9NWB7 429 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 HOMER2Q9NSB8 354 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 REC8O95072 547 aa12.99□□□□□ -0.33
CACNA1C-210ENST00000399606 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 DZIP1Q86YF9 867 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 RBM26Q5T8P6 1007 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 EXOC5O00471 708 aa12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 COMMD10Q9Y6G5 202 aa12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 WDR97A6NE52 1622 aa12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
CACNA1C-210ENST00000399606 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 LRSAM1Q6UWE0 723 aa12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 TICAM2Q86XR7 235 aa12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 SURF6O75683 361 aaKnown RBP12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 ANKRD18AQ8IVF6 992 aa12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 DYDC1Q8WWB3 177 aa12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 CUL5Q93034 780 aa12.97□□□□□ -0.33
CACNA1C-210ENST00000399606 PPP6R1Q9UPN7 881 aa12.96□□□□□ -0.33
CACNA1C-210ENST00000399606 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
CACNA1C-210ENST00000399606 CCDC181Q5TID7 509 aa12.96□□□□□ -0.33
CACNA1C-210ENST00000399606 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.33
CACNA1C-210ENST00000399606 FAM193AP78312 1265 aa12.96□□□□□ -0.34
CACNA1C-210ENST00000399606 ZSCAN25Q6NSZ9 544 aa12.96□□□□□ -0.34
CACNA1C-210ENST00000399606 NFKBIBQ15653 356 aa12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 MKNK2Q9HBH9 465 aa12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 PSMA5P28066 241 aa12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 GPR162Q16538 588 aa12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 USP47Q96K76 1375 aa12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 PABPN1LA6NDY0 278 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 SEC63Q9UGP8 760 aaKnown RBP12.95□□□□□ -0.34
CACNA1C-210ENST00000399606 ANAPC15P60006 121 aa12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 BACH2Q9BYV9 841 aa12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 IGF1RP08069 1367 aa12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 COG6Q9Y2V7 657 aa12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 AQRO60306 1485 aaKnown RBP eCLIP12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 MRPS9P82933 396 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 MTERF4Q7Z6M4 381 aaKnown RBP12.94□□□□□ -0.34
CACNA1C-210ENST00000399606 ZNF354CQ86Y25 554 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms