RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 COG3Q96JB2 828 aa14.86□□□□□ -0.03
ITSN1-211ENST00000399355 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
ITSN1-211ENST00000399355 EIF4A2Q14240 407 aaKnown RBP14.85□□□□□ -0.03
ITSN1-211ENST00000399355 G2E3Q7L622 706 aa14.85□□□□□ -0.03
ITSN1-211ENST00000399355 TBC1D32Q96NH3 1257 aa14.85□□□□□ -0.03
ITSN1-211ENST00000399355 C22orf23Q9BZE7 217 aa14.84□□□□□ -0.03
ITSN1-211ENST00000399355 ACEP12821 1306 aa14.84□□□□□ -0.03
ITSN1-211ENST00000399355 A2ML1A8K2U0 1454 aa14.84□□□□□ -0.03
ITSN1-211ENST00000399355 NFE2L2Q16236 605 aa14.84□□□□□ -0.03
ITSN1-211ENST00000399355 ZMYM3Q14202 1370 aa14.83□□□□□ -0.04
ITSN1-211ENST00000399355 NEO1Q92859 1461 aa14.83□□□□□ -0.04
ITSN1-211ENST00000399355 TPRNQ4KMQ1 711 aa14.82□□□□□ -0.04
ITSN1-211ENST00000399355 CCDC61Q9Y6R9 512 aa14.82□□□□□ -0.04
ITSN1-211ENST00000399355 DDX19BQ9UMR2 479 aa14.82□□□□□ -0.04
ITSN1-211ENST00000399355 AK9Q5TCS8 1911 aa14.82□□□□□ -0.04
ITSN1-211ENST00000399355 ZBTB7BO15156 539 aaPredicted RBP14.82□□□□□ -0.04
ITSN1-211ENST00000399355 FCHSD2O94868 740 aa14.82□□□□□ -0.04
ITSN1-211ENST00000399355 MRPL50Q8N5N7 158 aaKnown RBP14.81□□□□□ -0.04
ITSN1-211ENST00000399355 PANK2Q9BZ23 570 aa14.81□□□□□ -0.04
ITSN1-211ENST00000399355 MEIS3Q99687 375 aa14.8□□□□□ -0.04
ITSN1-211ENST00000399355 ANXA1P04083 346 aa14.8□□□□□ -0.04
ITSN1-211ENST00000399355 CHD1LQ86WJ1 897 aa14.8□□□□□ -0.04
ITSN1-211ENST00000399355 FOXD4L5Q5VV16 416 aaPredicted RBP14.79□□□□□ -0.04
ITSN1-211ENST00000399355 FOXD4L4Q8WXT5 416 aaPredicted RBP14.79□□□□□ -0.04
ITSN1-211ENST00000399355 ANTXR1Q9H6X2 564 aa14.79□□□□□ -0.04
ITSN1-211ENST00000399355 RIMS1Q86UR5 1692 aaKnown RBP14.79□□□□□ -0.04
ITSN1-211ENST00000399355 NOL8Q76FK4 1167 aaKnown RBP14.78□□□□□ -0.04
ITSN1-211ENST00000399355 UPF2Q9HAU5 1272 aaKnown RBP14.78□□□□□ -0.04
ITSN1-211ENST00000399355 UTRNP46939 3433 aa14.78□□□□□ -0.04
ITSN1-211ENST00000399355 MED14O60244 1454 aa14.78□□□□□ -0.04
ITSN1-211ENST00000399355 ADGRB2O60241 1585 aa14.77□□□□□ -0.04
ITSN1-211ENST00000399355 FAM135BQ49AJ0 1406 aa14.77□□□□□ -0.05
ITSN1-211ENST00000399355 PNPLA6Q8IY17 1366 aa14.77□□□□□ -0.05
ITSN1-211ENST00000399355 SMC5Q8IY18 1101 aa14.77□□□□□ -0.05
ITSN1-211ENST00000399355 MAP3K19Q56UN5 1328 aa14.77□□□□□ -0.05
ITSN1-211ENST00000399355 GSPT1P15170 499 aaKnown RBP14.76□□□□□ -0.05
ITSN1-211ENST00000399355 RIMBP3CA6NJZ7 1639 aa14.76□□□□□ -0.05
ITSN1-211ENST00000399355 RIMBP3BA6NNM3 1639 aa14.76□□□□□ -0.05
ITSN1-211ENST00000399355 RIMBP3Q9UFD9 1639 aa14.76□□□□□ -0.05
ITSN1-211ENST00000399355 NGDNQ8NEJ9 315 aaKnown RBP14.76□□□□□ -0.05
ITSN1-211ENST00000399355 ARHGAP31Q2M1Z3 1444 aa14.76□□□□□ -0.05
ITSN1-211ENST00000399355 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
ITSN1-211ENST00000399355 MTHFSDQ2M296 383 aaKnown RBP14.76□□□□□ -0.05
ITSN1-211ENST00000399355 LMOD2Q6P5Q4 547 aa14.76□□□□□ -0.05
ITSN1-211ENST00000399355 AMOTL2Q9Y2J4 779 aa14.76□□□□□ -0.05
ITSN1-211ENST00000399355 FOXD4L6Q3SYB3 417 aaPredicted RBP14.76□□□□□ -0.05
ITSN1-211ENST00000399355 FOXD4L3Q6VB84 417 aaPredicted RBP14.76□□□□□ -0.05
ITSN1-211ENST00000399355 NUCB1Q02818 461 aa14.75□□□□□ -0.05
ITSN1-211ENST00000399355 TBC1D9Q6ZT07 1266 aa14.75□□□□□ -0.05
ITSN1-211ENST00000399355 EXOC6BQ9Y2D4 811 aa14.75□□□□□ -0.05
ITSN1-211ENST00000399355 NSD2O96028 1365 aa14.75□□□□□ -0.05
ITSN1-211ENST00000399355 NEURL4Q96JN8 1562 aa14.75□□□□□ -0.05
ITSN1-211ENST00000399355 TTC21BQ7Z4L5 1316 aa14.74□□□□□ -0.05
ITSN1-211ENST00000399355 PKP1Q13835 747 aa14.74□□□□□ -0.05
ITSN1-211ENST00000399355 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
ITSN1-211ENST00000399355 CFAP74Q9C0B2 1584 aa14.73□□□□□ -0.05
ITSN1-211ENST00000399355 KIF16BQ96L93 1317 aa14.73□□□□□ -0.05
ITSN1-211ENST00000399355 MAP4K4O95819 1239 aaPredicted RBP14.73□□□□□ -0.05
ITSN1-211ENST00000399355 HDAC1Q13547 482 aaPredicted RBP14.73□□□□□ -0.05
ITSN1-211ENST00000399355 TRHP20396 242 aaPredicted RBP14.72□□□□□ -0.05
ITSN1-211ENST00000399355 NLRP6P59044 892 aa14.72□□□□□ -0.05
ITSN1-211ENST00000399355 KIF2CQ99661 725 aa14.72□□□□□ -0.05
ITSN1-211ENST00000399355 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
ITSN1-211ENST00000399355 LARP6Q9BRS8 491 aaKnown RBP14.72□□□□□ -0.05
ITSN1-211ENST00000399355 DIP2BQ9P265 1576 aa14.72□□□□□ -0.05
ITSN1-211ENST00000399355 IPO8O15397 1037 aaKnown RBP14.72□□□□□ -0.05
ITSN1-211ENST00000399355 KCNA6P17658 529 aa14.71□□□□□ -0.05
ITSN1-211ENST00000399355 NGEFQ8N5V2 710 aa14.71□□□□□ -0.05
ITSN1-211ENST00000399355 MSH6P52701 1360 aa14.71□□□□□ -0.05
ITSN1-211ENST00000399355 BECN1Q14457 450 aa14.71□□□□□ -0.05
ITSN1-211ENST00000399355 AMPHP49418 695 aa14.71□□□□□ -0.05
ITSN1-211ENST00000399355 GNAI1P63096 354 aa14.71□□□□□ -0.05
ITSN1-211ENST00000399355 EYA1Q99502 592 aa14.71□□□□□ -0.05
ITSN1-211ENST00000399355 USP35Q9P2H5 1018 aa14.7□□□□□ -0.06
ITSN1-211ENST00000399355 NRXN3Q9Y4C0 1643 aa14.7□□□□□ -0.06
ITSN1-211ENST00000399355 CPSF1Q10570 1443 aaKnown RBP14.7□□□□□ -0.06
ITSN1-211ENST00000399355 ZNF853P0CG23 659 aa14.7□□□□□ -0.06
ITSN1-211ENST00000399355 EIF2S2P20042 333 aaKnown RBP14.7□□□□□ -0.06
ITSN1-211ENST00000399355 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
ITSN1-211ENST00000399355 KCNQ3O43525 872 aa14.7□□□□□ -0.06
ITSN1-211ENST00000399355 DDX17Q92841 729 aaKnown RBP14.7□□□□□ -0.06
ITSN1-211ENST00000399355 LRRC59Q96AG4 307 aaKnown RBP14.7□□□□□ -0.06
ITSN1-211ENST00000399355 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
ITSN1-211ENST00000399355 DLC1Q96QB1 1528 aa14.69□□□□□ -0.06
ITSN1-211ENST00000399355 ZFYVE9O95405 1425 aa14.69□□□□□ -0.06
ITSN1-211ENST00000399355 HSP90AA1P07900 732 aaKnown RBP14.69□□□□□ -0.06
ITSN1-211ENST00000399355 KIF20BQ96Q89 1820 aa14.69□□□□□ -0.06
ITSN1-211ENST00000399355 USP32Q8NFA0 1604 aa14.69□□□□□ -0.06
ITSN1-211ENST00000399355 GAS2L2Q8NHY3 880 aa14.69□□□□□ -0.06
ITSN1-211ENST00000399355 IFT57Q9NWB7 429 aa14.68□□□□□ -0.06
ITSN1-211ENST00000399355 ATP7BP35670 1465 aa14.68□□□□□ -0.06
ITSN1-211ENST00000399355 IL1RAPL2Q9NP60 686 aa14.68□□□□□ -0.06
ITSN1-211ENST00000399355 RGPD8O14715 1765 aaPredicted RBP14.67□□□□□ -0.06
ITSN1-211ENST00000399355 PHAXQ9H814 394 aaKnown RBP14.67□□□□□ -0.06
ITSN1-211ENST00000399355 VIRMAQ69YN4 1812 aaKnown RBP14.67□□□□□ -0.06
ITSN1-211ENST00000399355 TNRQ92752 1358 aa14.67□□□□□ -0.06
ITSN1-211ENST00000399355 NINLQ9Y2I6 1382 aa14.67□□□□□ -0.06
ITSN1-211ENST00000399355 PIP4K2AP48426 406 aaPredicted RBP14.67□□□□□ -0.06
ITSN1-211ENST00000399355 EDC4Q6P2E9 1401 aaKnown RBP14.67□□□□□ -0.06
ITSN1-211ENST00000399355 PRAMEF22A3QJZ6 481 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms