RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 ACEP12821 1306 aa17.64■□□□□ 0.42
PRAME-202ENST00000398743 TTC21BQ7Z4L5 1316 aa17.64■□□□□ 0.42
PRAME-202ENST00000398743 SLIT1O75093 1534 aa17.64■□□□□ 0.42
PRAME-202ENST00000398743 LMOD3Q0VAK6 560 aa17.64■□□□□ 0.41
PRAME-202ENST00000398743 PTPRUQ92729 1446 aa17.64■□□□□ 0.41
PRAME-202ENST00000398743 GNAI1P63096 354 aa17.63■□□□□ 0.41
PRAME-202ENST00000398743 IFT57Q9NWB7 429 aa17.63■□□□□ 0.41
PRAME-202ENST00000398743 PDZRN3Q9UPQ7 1066 aa17.63■□□□□ 0.41
PRAME-202ENST00000398743 VIRMAQ69YN4 1812 aaKnown RBP17.63■□□□□ 0.41
PRAME-202ENST00000398743 ARHGAP23Q9P227 1491 aa17.63■□□□□ 0.41
PRAME-202ENST00000398743 RTL5Q5HYW3 569 aaPredicted RBP17.63■□□□□ 0.41
PRAME-202ENST00000398743 USP6P35125 1406 aa17.62■□□□□ 0.41
PRAME-202ENST00000398743 OVOS2A0A0J9YW53 1432 aa17.62■□□□□ 0.41
PRAME-202ENST00000398743 OVOS2Q6IE36 1432 aa17.62■□□□□ 0.41
PRAME-202ENST00000398743 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
PRAME-202ENST00000398743 TMEM57Q8N5G2 664 aa17.62■□□□□ 0.41
PRAME-202ENST00000398743 THUMPD2Q9BTF0 503 aaKnown RBP17.62■□□□□ 0.41
PRAME-202ENST00000398743 DAXXQ9UER7 740 aaPredicted RBP17.62■□□□□ 0.41
PRAME-202ENST00000398743 NUTM2FA1L443 756 aa17.61■□□□□ 0.41
PRAME-202ENST00000398743 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
PRAME-202ENST00000398743 AMOTL2Q9Y2J4 779 aa17.6■□□□□ 0.41
PRAME-202ENST00000398743 PTCH1Q13635 1447 aa17.6■□□□□ 0.41
PRAME-202ENST00000398743 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
PRAME-202ENST00000398743 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
PRAME-202ENST00000398743 VAMP4O75379 141 aa17.59■□□□□ 0.41
PRAME-202ENST00000398743 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
PRAME-202ENST00000398743 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
PRAME-202ENST00000398743 EIF4A2Q14240 407 aaKnown RBP17.58■□□□□ 0.4
PRAME-202ENST00000398743 PLPPR3Q6T4P5 718 aa17.58■□□□□ 0.4
PRAME-202ENST00000398743 THEMISQ8N1K5 641 aaPredicted RBP17.58■□□□□ 0.4
PRAME-202ENST00000398743 ZBTB40Q9NUA8 1239 aa17.58■□□□□ 0.4
PRAME-202ENST00000398743 FER1L4A9Z1Z3 1794 aa17.58■□□□□ 0.4
PRAME-202ENST00000398743 DIP2AQ14689 1571 aa17.57■□□□□ 0.4
PRAME-202ENST00000398743 USP31Q70CQ4 1352 aa17.56■□□□□ 0.4
PRAME-202ENST00000398743 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
PRAME-202ENST00000398743 SSH2Q76I76 1423 aa17.56■□□□□ 0.4
PRAME-202ENST00000398743 USP19O94966 1318 aa17.56■□□□□ 0.4
PRAME-202ENST00000398743 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
PRAME-202ENST00000398743 TSPYL6Q8N831 410 aa17.56■□□□□ 0.4
PRAME-202ENST00000398743 ARHGAP45Q92619 1136 aa17.56■□□□□ 0.4
PRAME-202ENST00000398743 TTC21AQ8NDW8 1320 aa17.55■□□□□ 0.4
PRAME-202ENST00000398743 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
PRAME-202ENST00000398743 SEC24BO95487 1268 aa17.55■□□□□ 0.4
PRAME-202ENST00000398743 SLC4A3P48751 1232 aa17.55■□□□□ 0.4
PRAME-202ENST00000398743 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
PRAME-202ENST00000398743 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
PRAME-202ENST00000398743 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
PRAME-202ENST00000398743 AEBP1Q8IUX7 1158 aa17.54■□□□□ 0.4
PRAME-202ENST00000398743 CHMP4BQ9H444 224 aaKnown RBP17.54■□□□□ 0.4
PRAME-202ENST00000398743 DLG5Q8TDM6 1919 aa17.54■□□□□ 0.4
PRAME-202ENST00000398743 SMC5Q8IY18 1101 aa17.53■□□□□ 0.4
PRAME-202ENST00000398743 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
PRAME-202ENST00000398743 DEKP35659 375 aaKnown RBP17.53■□□□□ 0.4
PRAME-202ENST00000398743 UPF2Q9HAU5 1272 aaKnown RBP17.53■□□□□ 0.4
PRAME-202ENST00000398743 ELL2O00472 640 aaPredicted RBP17.52■□□□□ 0.4
PRAME-202ENST00000398743 HSP90AB2PQ58FF8 381 aa17.52■□□□□ 0.4
PRAME-202ENST00000398743 PEAK1Q9H792 1746 aa17.52■□□□□ 0.39
PRAME-202ENST00000398743 DCTN1Q14203 1278 aa17.52■□□□□ 0.39
PRAME-202ENST00000398743 NGDNQ8NEJ9 315 aaKnown RBP17.51■□□□□ 0.39
PRAME-202ENST00000398743 C8orf58Q8NAV2 365 aa17.5■□□□□ 0.39
PRAME-202ENST00000398743 RGPD1P0DJD0 1748 aa17.5■□□□□ 0.39
PRAME-202ENST00000398743 XRN1Q8IZH2 1706 aaKnown RBP17.5■□□□□ 0.39
PRAME-202ENST00000398743 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
PRAME-202ENST00000398743 SOX12O15370 315 aa17.49■□□□□ 0.39
PRAME-202ENST00000398743 ABCC4O15439 1325 aa17.49■□□□□ 0.39
PRAME-202ENST00000398743 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
PRAME-202ENST00000398743 FLT4P35916 1363 aa17.48■□□□□ 0.39
PRAME-202ENST00000398743 MAP3K19Q56UN5 1328 aa17.48■□□□□ 0.39
PRAME-202ENST00000398743 HAP1P54257 671 aaPredicted RBP17.48■□□□□ 0.39
PRAME-202ENST00000398743 SBNO1A3KN83 1393 aa17.48■□□□□ 0.39
PRAME-202ENST00000398743 API5Q9BZZ5 524 aaKnown RBP17.47■□□□□ 0.39
PRAME-202ENST00000398743 ANKARQ7Z5J8 1434 aa17.47■□□□□ 0.39
PRAME-202ENST00000398743 RIMS1Q86UR5 1692 aaKnown RBP17.46■□□□□ 0.39
PRAME-202ENST00000398743 NUCB1Q02818 461 aa17.46■□□□□ 0.39
PRAME-202ENST00000398743 TBC1D32Q96NH3 1257 aa17.46■□□□□ 0.39
PRAME-202ENST00000398743 BECN1Q14457 450 aa17.46■□□□□ 0.39
PRAME-202ENST00000398743 CHL1O00533 1208 aa17.45■□□□□ 0.38
PRAME-202ENST00000398743 KCNA6P17658 529 aa17.45■□□□□ 0.38
PRAME-202ENST00000398743 MCM10Q7L590 875 aa17.45■□□□□ 0.38
PRAME-202ENST00000398743 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
PRAME-202ENST00000398743 GCC1Q96CN9 775 aa17.44■□□□□ 0.38
PRAME-202ENST00000398743 PIK3C2AO00443 1686 aa17.44■□□□□ 0.38
PRAME-202ENST00000398743 FMN2Q9NZ56 1722 aa17.44■□□□□ 0.38
PRAME-202ENST00000398743 CHD1LQ86WJ1 897 aa17.43■□□□□ 0.38
PRAME-202ENST00000398743 KIAA0232Q92628 1395 aa17.43■□□□□ 0.38
PRAME-202ENST00000398743 RGPD8O14715 1765 aaPredicted RBP17.43■□□□□ 0.38
PRAME-202ENST00000398743 TRHP20396 242 aaPredicted RBP17.43■□□□□ 0.38
PRAME-202ENST00000398743 AMPHP49418 695 aa17.43■□□□□ 0.38
PRAME-202ENST00000398743 KDRP35968 1356 aa17.43■□□□□ 0.38
PRAME-202ENST00000398743 KIF24Q5T7B8 1368 aa17.43■□□□□ 0.38
PRAME-202ENST00000398743 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
PRAME-202ENST00000398743 NFKBIBQ15653 356 aa17.42■□□□□ 0.38
PRAME-202ENST00000398743 LNPKQ9C0E8 428 aa17.42■□□□□ 0.38
PRAME-202ENST00000398743 NLRP6P59044 892 aa17.41■□□□□ 0.38
PRAME-202ENST00000398743 CRB1P82279 1406 aa17.41■□□□□ 0.38
PRAME-202ENST00000398743 IGSF1Q8N6C5 1336 aa17.4■□□□□ 0.38
PRAME-202ENST00000398743 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
PRAME-202ENST00000398743 RTF1Q92541 710 aaKnown RBP17.4■□□□□ 0.38
PRAME-202ENST00000398743 KRT24Q2M2I5 525 aa17.39■□□□□ 0.37
PRAME-202ENST00000398743 EYA1Q99502 592 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms