RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
PRAME-201ENST00000398741 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
PRAME-201ENST00000398741 VAMP4O75379 141 aa16.46■□□□□ 0.23
PRAME-201ENST00000398741 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
PRAME-201ENST00000398741 ARHGAP45Q92619 1136 aa16.46■□□□□ 0.23
PRAME-201ENST00000398741 ADAMTSL3P82987 1691 aa16.45■□□□□ 0.22
PRAME-201ENST00000398741 IL13P35225 146 aa16.45■□□□□ 0.22
PRAME-201ENST00000398741 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
PRAME-201ENST00000398741 NME9Q86XW9 330 aa16.45■□□□□ 0.22
PRAME-201ENST00000398741 CHMP5Q9NZZ3 219 aa16.45■□□□□ 0.22
PRAME-201ENST00000398741 RIMS1Q86UR5 1692 aaKnown RBP16.44■□□□□ 0.22
PRAME-201ENST00000398741 UBR1Q8IWV7 1749 aa16.44■□□□□ 0.22
PRAME-201ENST00000398741 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
PRAME-201ENST00000398741 COG3Q96JB2 828 aa16.44■□□□□ 0.22
PRAME-201ENST00000398741 CPSF1Q10570 1443 aaKnown RBP16.44■□□□□ 0.22
PRAME-201ENST00000398741 CDK12Q9NYV4 1490 aaPredicted RBP16.44■□□□□ 0.22
PRAME-201ENST00000398741 ZBTB7BO15156 539 aaPredicted RBP16.43■□□□□ 0.22
PRAME-201ENST00000398741 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
PRAME-201ENST00000398741 ELL2O00472 640 aaPredicted RBP16.43■□□□□ 0.22
PRAME-201ENST00000398741 ANKRD45Q5TZF3 282 aa16.43■□□□□ 0.22
PRAME-201ENST00000398741 TSPYL6Q8N831 410 aa16.43■□□□□ 0.22
PRAME-201ENST00000398741 MBIPQ9NS73 344 aa16.43■□□□□ 0.22
PRAME-201ENST00000398741 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
PRAME-201ENST00000398741 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.42■□□□□ 0.22
PRAME-201ENST00000398741 PIK3R4Q99570 1358 aa16.42■□□□□ 0.22
PRAME-201ENST00000398741 TWISTNBQ3B726 338 aaPredicted RBP16.42■□□□□ 0.22
PRAME-201ENST00000398741 C1orf115Q9H7X2 142 aa16.42■□□□□ 0.22
PRAME-201ENST00000398741 BMP2KLQ5H9B9 411 aa16.41■□□□□ 0.22
PRAME-201ENST00000398741 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
PRAME-201ENST00000398741 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
PRAME-201ENST00000398741 NUDT16Q96DE0 195 aaKnown RBP16.41■□□□□ 0.22
PRAME-201ENST00000398741 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
PRAME-201ENST00000398741 ZNF853P0CG23 659 aa16.41■□□□□ 0.22
PRAME-201ENST00000398741 MCM4P33991 863 aa16.41■□□□□ 0.22
PRAME-201ENST00000398741 RBM25P49756 843 aaKnown RBP16.41■□□□□ 0.22
PRAME-201ENST00000398741 TXNDC2Q86VQ3 553 aa16.41■□□□□ 0.22
PRAME-201ENST00000398741 CFAP44Q96MT7 982 aa16.41■□□□□ 0.22
PRAME-201ENST00000398741 SETD1AO15047 1707 aaKnown RBP16.4■□□□□ 0.22
PRAME-201ENST00000398741 RRS1Q15050 365 aaKnown RBP16.39■□□□□ 0.22
PRAME-201ENST00000398741 API5Q9BZZ5 524 aaKnown RBP16.39■□□□□ 0.22
PRAME-201ENST00000398741 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.22
PRAME-201ENST00000398741 ABCC4O15439 1325 aa16.39■□□□□ 0.21
PRAME-201ENST00000398741 MAP2P11137 1827 aaKnown RBP16.39■□□□□ 0.21
PRAME-201ENST00000398741 METP08581 1390 aa16.39■□□□□ 0.21
PRAME-201ENST00000398741 HDGFP51858 240 aaKnown RBP16.37■□□□□ 0.21
PRAME-201ENST00000398741 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
PRAME-201ENST00000398741 SNX21Q969T3 373 aa16.37■□□□□ 0.21
PRAME-201ENST00000398741 NCKAP5LQ9HCH0 1330 aa16.36■□□□□ 0.21
PRAME-201ENST00000398741 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
PRAME-201ENST00000398741 HSP90AB1P08238 724 aaKnown RBP16.35■□□□□ 0.21
PRAME-201ENST00000398741 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
PRAME-201ENST00000398741 NRXN3Q9Y4C0 1643 aa16.35■□□□□ 0.21
PRAME-201ENST00000398741 CPS1P31327 1500 aa16.35■□□□□ 0.21
PRAME-201ENST00000398741 TMEM2Q9UHN6 1383 aa16.35■□□□□ 0.21
PRAME-201ENST00000398741 DCTN1Q14203 1278 aa16.34■□□□□ 0.21
PRAME-201ENST00000398741 SIRT1Q96EB6 747 aa16.34■□□□□ 0.21
PRAME-201ENST00000398741 GOLGA6L3A6NEY3 463 aa16.34■□□□□ 0.21
PRAME-201ENST00000398741 DDX11L8A8MPP1 907 aa16.34■□□□□ 0.21
PRAME-201ENST00000398741 SIRT2Q8IXJ6 389 aa16.34■□□□□ 0.21
PRAME-201ENST00000398741 HAP1P54257 671 aaPredicted RBP16.33■□□□□ 0.2
PRAME-201ENST00000398741 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
PRAME-201ENST00000398741 NCOA3Q9Y6Q9 1424 aa16.33■□□□□ 0.2
PRAME-201ENST00000398741 TRAK2O60296 914 aa16.33■□□□□ 0.2
PRAME-201ENST00000398741 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.2
PRAME-201ENST00000398741 GZF1Q9H116 711 aaPredicted RBP16.33■□□□□ 0.2
PRAME-201ENST00000398741 KIF24Q5T7B8 1368 aa16.32■□□□□ 0.2
PRAME-201ENST00000398741 ARXQ96QS3 562 aa16.32■□□□□ 0.2
PRAME-201ENST00000398741 TECPR2O15040 1411 aa16.32■□□□□ 0.2
PRAME-201ENST00000398741 MON2Q7Z3U7 1717 aa16.32■□□□□ 0.2
PRAME-201ENST00000398741 HSP90AA1P07900 732 aaKnown RBP16.31■□□□□ 0.2
PRAME-201ENST00000398741 CDC45O75419 566 aa16.31■□□□□ 0.2
PRAME-201ENST00000398741 EIF5BO60841 1220 aaKnown RBP16.3■□□□□ 0.2
PRAME-201ENST00000398741 SULT6B1Q6IMI4 303 aa16.3■□□□□ 0.2
PRAME-201ENST00000398741 CIZ1Q9ULV3 898 aaPredicted RBP16.3■□□□□ 0.2
PRAME-201ENST00000398741 PRR36Q9H6K5 1346 aa16.3■□□□□ 0.2
PRAME-201ENST00000398741 SLIT1O75093 1534 aa16.3■□□□□ 0.2
PRAME-201ENST00000398741 LTKP29376 864 aa16.3■□□□□ 0.2
PRAME-201ENST00000398741 EIF4A2Q14240 407 aaKnown RBP16.3■□□□□ 0.2
PRAME-201ENST00000398741 ARHGAP23Q9P227 1491 aa16.3■□□□□ 0.2
PRAME-201ENST00000398741 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
PRAME-201ENST00000398741 CEP170BQ9Y4F5 1589 aaPredicted RBP16.29■□□□□ 0.2
PRAME-201ENST00000398741 DDIT3P35638 169 aa16.29■□□□□ 0.2
PRAME-201ENST00000398741 AEBP1Q8IUX7 1158 aa16.29■□□□□ 0.2
PRAME-201ENST00000398741 ANO8Q9HCE9 1232 aaPredicted RBP16.29■□□□□ 0.2
PRAME-201ENST00000398741 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
PRAME-201ENST00000398741 KIF2CQ99661 725 aa16.28■□□□□ 0.2
PRAME-201ENST00000398741 TTC21BQ7Z4L5 1316 aa16.28■□□□□ 0.2
PRAME-201ENST00000398741 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
PRAME-201ENST00000398741 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
PRAME-201ENST00000398741 GBP4Q96PP9 640 aa16.27■□□□□ 0.2
PRAME-201ENST00000398741 DCTPP1Q9H773 170 aa16.27■□□□□ 0.2
PRAME-201ENST00000398741 SETD1BQ9UPS6 1966 aaKnown RBP16.27■□□□□ 0.2
PRAME-201ENST00000398741 FSD2A1L4K1 749 aa16.27■□□□□ 0.19
PRAME-201ENST00000398741 K7ELQ4 463 aaPredicted RBP16.27■□□□□ 0.19
PRAME-201ENST00000398741 ZNF142P52746 1687 aaPredicted RBP16.27■□□□□ 0.19
PRAME-201ENST00000398741 NRKQ7Z2Y5 1582 aa16.26■□□□□ 0.19
PRAME-201ENST00000398741 AKAP12Q02952 1782 aa16.26■□□□□ 0.19
PRAME-201ENST00000398741 TNPO1Q92973 898 aaKnown RBP16.26■□□□□ 0.19
PRAME-201ENST00000398741 XRCC6P12956 609 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRAME-201ENST00000398741 GSPT1P15170 499 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms