RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 REC8O95072 547 aa17.24■□□□□ 0.35
PCDHA11-201ENST00000398640 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
PCDHA11-201ENST00000398640 VPS37CA5D8V6 355 aaPredicted RBP17.23■□□□□ 0.35
PCDHA11-201ENST00000398640 TMEM132AQ24JP5 1023 aa17.23■□□□□ 0.35
PCDHA11-201ENST00000398640 NBPF8Q3BBV2 869 aa17.23■□□□□ 0.35
PCDHA11-201ENST00000398640 BCL11BQ9C0K0 894 aaPredicted RBP17.22■□□□□ 0.35
PCDHA11-201ENST00000398640 DISP1Q96F81 1524 aa17.22■□□□□ 0.35
PCDHA11-201ENST00000398640 CFAP74Q9C0B2 1584 aa17.22■□□□□ 0.35
PCDHA11-201ENST00000398640 PPP2R1AP30153 589 aa17.22■□□□□ 0.35
PCDHA11-201ENST00000398640 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
PCDHA11-201ENST00000398640 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
PCDHA11-201ENST00000398640 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
PCDHA11-201ENST00000398640 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
PCDHA11-201ENST00000398640 ATP2B2Q01814 1243 aa17.21■□□□□ 0.35
PCDHA11-201ENST00000398640 ZFYVE16Q7Z3T8 1539 aa17.21■□□□□ 0.34
PCDHA11-201ENST00000398640 C14orf93Q9H972 538 aaKnown RBP17.2■□□□□ 0.34
PCDHA11-201ENST00000398640 R3HCC1Q9Y3T6 440 aaKnown RBP17.2■□□□□ 0.34
PCDHA11-201ENST00000398640 STK11IPQ8N1F8 1099 aa17.2■□□□□ 0.34
PCDHA11-201ENST00000398640 NSD3Q9BZ95 1437 aa17.2■□□□□ 0.34
PCDHA11-201ENST00000398640 STARD3NLO95772 234 aa17.2■□□□□ 0.34
PCDHA11-201ENST00000398640 BTBD11A6QL63 1104 aa17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 RALYLQ86SE5 291 aaKnown RBP17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 DNAJC2Q99543 621 aaKnown RBP17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 LNPKQ9C0E8 428 aa17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 C19orf44Q9H6X5 657 aa17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 CHD1O14646 1710 aa17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 NEO1Q92859 1461 aa17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 CNNM1Q9NRU3 951 aa17.19■□□□□ 0.34
PCDHA11-201ENST00000398640 ZPR1O75312 459 aa17.18■□□□□ 0.34
PCDHA11-201ENST00000398640 BICDL1Q6ZP65 573 aa17.18■□□□□ 0.34
PCDHA11-201ENST00000398640 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
PCDHA11-201ENST00000398640 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
PCDHA11-201ENST00000398640 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
PCDHA11-201ENST00000398640 IPO7O95373 1038 aaKnown RBP17.17■□□□□ 0.34
PCDHA11-201ENST00000398640 CCDC70Q6NSX1 233 aa17.17■□□□□ 0.34
PCDHA11-201ENST00000398640 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
PCDHA11-201ENST00000398640 NME9Q86XW9 330 aa17.17■□□□□ 0.34
PCDHA11-201ENST00000398640 SMC3Q9UQE7 1217 aa17.17■□□□□ 0.34
PCDHA11-201ENST00000398640 ERC2O15083 957 aa17.17■□□□□ 0.34
PCDHA11-201ENST00000398640 LRRC59Q96AG4 307 aaKnown RBP17.17■□□□□ 0.34
PCDHA11-201ENST00000398640 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.16■□□□□ 0.34
PCDHA11-201ENST00000398640 MYL6BP14649 208 aa17.16■□□□□ 0.34
PCDHA11-201ENST00000398640 RRP12Q5JTH9 1297 aaKnown RBP17.16■□□□□ 0.34
PCDHA11-201ENST00000398640 SKOR2Q2VWA4 1001 aaPredicted RBP17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 HOOK1Q9UJC3 728 aaKnown RBP17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 AMOTQ4VCS5 1084 aa17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 HDGFL1Q5TGJ6 251 aa17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 TCP11L2Q8N4U5 519 aa17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 NAP1L1P55209 391 aaKnown RBP17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 INTS3Q68E01 1043 aaKnown RBP17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 ZNF652Q9Y2D9 606 aa17.15■□□□□ 0.34
PCDHA11-201ENST00000398640 SAFBQ15424 915 aaKnown RBP eCLIP17.14■□□□□ 0.34
PCDHA11-201ENST00000398640 MPRIPQ6WCQ1 1025 aa17.14■□□□□ 0.34
PCDHA11-201ENST00000398640 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
PCDHA11-201ENST00000398640 ACEP12821 1306 aa17.14■□□□□ 0.33
PCDHA11-201ENST00000398640 USHBP1Q8N6Y0 703 aa17.14■□□□□ 0.33
PCDHA11-201ENST00000398640 CHRNA2Q15822 529 aa17.14■□□□□ 0.33
PCDHA11-201ENST00000398640 HOMER1Q86YM7 354 aa17.14■□□□□ 0.33
PCDHA11-201ENST00000398640 TTC39AQ5SRH9 613 aa17.13■□□□□ 0.33
PCDHA11-201ENST00000398640 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
PCDHA11-201ENST00000398640 ATP7AQ04656 1500 aa17.12■□□□□ 0.33
PCDHA11-201ENST00000398640 AK7Q96M32 723 aa17.12■□□□□ 0.33
PCDHA11-201ENST00000398640 BRD4O60885 1362 aaPredicted RBP17.12■□□□□ 0.33
PCDHA11-201ENST00000398640 TSPOAP1O95153 1857 aa17.12■□□□□ 0.33
PCDHA11-201ENST00000398640 CT47A1Q5JQC4 288 aaPredicted RBP17.11■□□□□ 0.33
PCDHA11-201ENST00000398640 ADAMTS8Q9UP79 889 aa17.11■□□□□ 0.33
PCDHA11-201ENST00000398640 BRMS1Q9HCU9 246 aa17.11■□□□□ 0.33
PCDHA11-201ENST00000398640 SASS6Q6UVJ0 657 aa17.11■□□□□ 0.33
PCDHA11-201ENST00000398640 IBSPP21815 317 aaPredicted RBP17.1■□□□□ 0.33
PCDHA11-201ENST00000398640 GSE1Q14687 1217 aa17.1■□□□□ 0.33
PCDHA11-201ENST00000398640 WWC2Q6AWC2 1192 aa17.1■□□□□ 0.33
PCDHA11-201ENST00000398640 SCAF11Q99590 1463 aaKnown RBP17.1■□□□□ 0.33
PCDHA11-201ENST00000398640 PTCD1O75127 700 aaKnown RBP17.1■□□□□ 0.33
PCDHA11-201ENST00000398640 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
PCDHA11-201ENST00000398640 TWISTNBQ3B726 338 aaPredicted RBP17.1■□□□□ 0.33
PCDHA11-201ENST00000398640 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
PCDHA11-201ENST00000398640 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
PCDHA11-201ENST00000398640 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
PCDHA11-201ENST00000398640 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
PCDHA11-201ENST00000398640 PAF1Q8N7H5 531 aa17.09■□□□□ 0.33
PCDHA11-201ENST00000398640 EPS15P42566 896 aa17.08■□□□□ 0.33
PCDHA11-201ENST00000398640 PAXIP1Q6ZW49 1069 aaPredicted RBP17.08■□□□□ 0.33
PCDHA11-201ENST00000398640 ZSCAN29Q8IWY8 852 aaPredicted RBP17.08■□□□□ 0.32
PCDHA11-201ENST00000398640 SIL1Q9H173 461 aa17.08■□□□□ 0.32
PCDHA11-201ENST00000398640 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
PCDHA11-201ENST00000398640 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
PCDHA11-201ENST00000398640 ATP2B1P20020 1258 aa17.08■□□□□ 0.32
PCDHA11-201ENST00000398640 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
PCDHA11-201ENST00000398640 FCHSD2O94868 740 aa17.07■□□□□ 0.32
PCDHA11-201ENST00000398640 KCNA6P17658 529 aa17.07■□□□□ 0.32
PCDHA11-201ENST00000398640 SPINK5Q9NQ38 1064 aaPredicted RBP17.07■□□□□ 0.32
PCDHA11-201ENST00000398640 MPHOSPH8Q99549 860 aa17.07■□□□□ 0.32
PCDHA11-201ENST00000398640 TBX22Q9Y458 520 aa17.06■□□□□ 0.32
PCDHA11-201ENST00000398640 TTC21AQ8NDW8 1320 aa17.06■□□□□ 0.32
PCDHA11-201ENST00000398640 NINLQ9Y2I6 1382 aa17.06■□□□□ 0.32
PCDHA11-201ENST00000398640 GNAI3P08754 354 aa17.06■□□□□ 0.32
PCDHA11-201ENST00000398640 GPS2Q13227 327 aa17.06■□□□□ 0.32
PCDHA11-201ENST00000398640 XBP1P17861 261 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms